Information report for AT3G09810
Gene Details
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Functional Descriptions
- GO:0006099 — acts upstream of or within — tricarboxylic acid cycle
- GO:0004449 — enables — isocitrate dehydrogenase (NAD+) activity
- GO:0006099 — involved in — tricarboxylic acid cycle
- GO:0005829 — located in — cytosol
- GO:0005739 — located in — mitochondrion
- GO:0009507 — located in — chloroplast
- GO:0005739 — is active in — mitochondrion
- GO:0000287 — enables — magnesium ion binding
- GO:0006102 — acts upstream of or within — isocitrate metabolic process
- GO:0051287 — enables — NAD binding
- GO:0006102 — involved in — isocitrate metabolic process
Functional Keywords
Literature and News
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Expression analysis of Arabidopsis thaliana NAD-dependent isocitrate dehydrogenase genes shows the presence of a functional subunit that is mainly expressed in the pollen and absent from vegetative organs. DOI: 10.1093/pcp/pcj030 ; PMID: 16527867
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The rules of gene expression in plants: organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana. DOI: 10.1186/1471-2164-9-438 ; PMID: 18811951
- Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids. DOI: 10.1111/j.1365-313X.2012.05021.x ; PMID: 22487254
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178V9M1
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178V9M1
- EnsemblPlants: AT3G09810.1
- Gramene: AT3G09810.1
- KEGG: ath:AT3G09810
- Orthologous matrix: MIPHDAK
- ExpressionAtlas: AT3G09810
- InterPro: IPR004434, IPR019818, IPR024084
- PANTHER: PTHR11835, PTHR11835:SF61
- SUPFAM: SSF53659
- PROSITE: PS00470
- Gene3D: 3.40.718.10
- OrthoDB: A0A178V9M1
- SWISS-MODEL: A0A178V9M1
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A0R4E2, arahy.Tifrunner.gnm1.ann1.XMGK4K, arahy.Tifrunner.gnm1.ann1.RFB9V8, arahy.Tifrunner.gnm1.ann1.W1D4FL
- Daucus carota DCAR_032067
- Musa acuminata GSMUA_Achr6P12930_001
- Oryza sativa OsIPMDH
Sequences
cDNA Sequence
- >AT3G09810.1
TTTCATCTGACCGGTTTTTATAATTTATTGATATCCGGTTCATTTGACCATGGCCGTTTAAGAACATAGGCTGATGCCGTTTCTTATTTTCAGACACTAACTTTGTGCCGTTTTATTTCATGGAAATCGAAATGTTCTCTGCTTCTCTGCTGGAGCTAGAGAAGGTATAAAAGTAAACTTTTTCAGGTCCAACGCAGCAAAAAGTCTCCTCTTTCCTCTCTTTCTCTCTCTGCGTCCTTCTGAGGCTGGAAGCGATGACCATGACAGCATTTCTCGCGAGACGGCTTATCGGTAACGGATCGAGCCAGATTCTCGGGACTTCGAGTTCTAGCTCCGGTCCGTTCATTTCCGTTTCTAGGGCTTTCTTCTCCTCCTCCACTCCGATCAAAGCTACTCTCTTTCCCGGTGATGGGATCGGTCCCGAAATCGCTGAATCTGTCAAGCAGGTGTTTACTGCCGCTGATGTGGTTATTGATTGGGACGAACAGTTTGTTGGTACTGAAGTAGATCCTAGAACCAATAGTTTCTTGACATGGGATAATCTTCAATCTGTGCTTAAAAACAAGGTTGGTTTGAAAGGACCAATGGCTACTCCAATTGGAAAGGGTCACCGTTCCTTGAACCTTACTCTTAGGAAAGAGCTGAATTTGTATGCCAATGTTAGGCCTTGTTACAGTCTTCCTGGTTACAAAACCCGTTATGATGATGTTGATCTCATTACCATTCGTGAGAACACTGAAGGAGAGTACAGTGGGCTTGAACACCAGGTCGTCAAGGGTGTAGTGGAAAGTCTTAAAATTATTACCCGTAAGGCGAGTATGAGAGTTGCCGAGTATGCCTTTCTTTATGCCAAGACTCACGGAAGGAAGAAAGTTTCTGCAATTCACAAAGCCAACATTATGCAGAAAACTGATGGTCTTTTCCTGCAGTGTTGTGATGAAGTTGCTGCGAAGTATCCTGAGATATATTACGAGAAGGTTGTTATTGACAATTGCTGTATGATGCTTGTGAAAAACCCAGCACTTTTTGATGTCTTGGTGATGCCAAATCTCTATGGAGATATTATCAGCGATTTGTGTGCTGGACTTGTTGGGGGACTAGGACTGACTCCTAGTATGAATATTGGGGAGGATGGTATTGCCCTTGCTGAAGCTGTTCACGGCTCTGCACCTGATATTGCTGGAATGAACCTGGCGAACCCAACAGCTTTGCTACTGAGTGGAGTGATGATGTTGCGGCACCTGAAGCTCAACAAACAAGCAGAGCAAATCCACAGTGCCATCATCAACACAATAGCCGAGGGAAAGTATAGAACTGCTGATCTCGGAGGTTCCTCAACTACAACAGATTTCACAAAAGCCATCTGTGATCATCTCTAAACACCCGTGAAAAACCATAATTCTTTCCTTACTTACTTATTGGATCTTCCTCTTGGATTTTCACTCCAAAATTTTTCTACATATTGATCCTCTTCCTATGAGGAGAAACAAAGCCGCCATAGGCTTTAGACATTGACTTGTGTTTTCCTTAGATTTGAAGTTCTTGCAGAGCTGTATTACTTCTTCTGCCTTTAAGATCCATAACAAAAGAAGGATACAGATATTGGAAGAATCCATCAAAAGGTTCACATTTACAGTTTGTGGATTTTGCCTGAATTGTTTGGCGTTATGTCTTATTCTCTGTGAATTTTCAACAATAATAATATCGTCCCTTTTGTCCTTACCTAAATTGTTTGCCTATTCTCTGTGAATGAATGAATACATAACTCTCAAAC
CDS Sequence
- >AT3G09810.1
ATGACCATGACAGCATTTCTCGCGAGACGGCTTATCGGTAACGGATCGAGCCAGATTCTCGGGACTTCGAGTTCTAGCTCCGGTCCGTTCATTTCCGTTTCTAGGGCTTTCTTCTCCTCCTCCACTCCGATCAAAGCTACTCTCTTTCCCGGTGATGGGATCGGTCCCGAAATCGCTGAATCTGTCAAGCAGGTGTTTACTGCCGCTGATGTGGTTATTGATTGGGACGAACAGTTTGTTGGTACTGAAGTAGATCCTAGAACCAATAGTTTCTTGACATGGGATAATCTTCAATCTGTGCTTAAAAACAAGGTTGGTTTGAAAGGACCAATGGCTACTCCAATTGGAAAGGGTCACCGTTCCTTGAACCTTACTCTTAGGAAAGAGCTGAATTTGTATGCCAATGTTAGGCCTTGTTACAGTCTTCCTGGTTACAAAACCCGTTATGATGATGTTGATCTCATTACCATTCGTGAGAACACTGAAGGAGAGTACAGTGGGCTTGAACACCAGGTCGTCAAGGGTGTAGTGGAAAGTCTTAAAATTATTACCCGTAAGGCGAGTATGAGAGTTGCCGAGTATGCCTTTCTTTATGCCAAGACTCACGGAAGGAAGAAAGTTTCTGCAATTCACAAAGCCAACATTATGCAGAAAACTGATGGTCTTTTCCTGCAGTGTTGTGATGAAGTTGCTGCGAAGTATCCTGAGATATATTACGAGAAGGTTGTTATTGACAATTGCTGTATGATGCTTGTGAAAAACCCAGCACTTTTTGATGTCTTGGTGATGCCAAATCTCTATGGAGATATTATCAGCGATTTGTGTGCTGGACTTGTTGGGGGACTAGGACTGACTCCTAGTATGAATATTGGGGAGGATGGTATTGCCCTTGCTGAAGCTGTTCACGGCTCTGCACCTGATATTGCTGGAATGAACCTGGCGAACCCAACAGCTTTGCTACTGAGTGGAGTGATGATGTTGCGGCACCTGAAGCTCAACAAACAAGCAGAGCAAATCCACAGTGCCATCATCAACACAATAGCCGAGGGAAAGTATAGAACTGCTGATCTCGGAGGTTCCTCAACTACAACAGATTTCACAAAAGCCATCTGTGATCATCTCTAA
Protein Sequence
- >AT3G09810.1
MTMTAFLARRLIGNGSSQILGTSSSSSGPFISVSRAFFSSSTPIKATLFPGDGIGPEIAESVKQVFTAADVVIDWDEQFVGTEVDPRTNSFLTWDNLQSVLKNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEHQVVKGVVESLKIITRKASMRVAEYAFLYAKTHGRKKVSAIHKANIMQKTDGLFLQCCDEVAAKYPEIYYEKVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSMNIGEDGIALAEAVHGSAPDIAGMNLANPTALLLSGVMMLRHLKLNKQAEQIHSAIINTIAEGKYRTADLGGSSTTTDFTKAICDHL