Information report for AT3G09720
Gene Details
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Functional Descriptions
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0005634 — located in — nucleus
- GO:0030490 — involved in — maturation of SSU-rRNA
- GO:0003724 — enables — RNA helicase activity
- gcc7 — high-glucosinolate chemotype caused by overexpression of IQD1 (At3g09710)
Functional Keywords
Literature and News
- Arabidopsis IQD1, a novel calmodulin-binding nuclear protein, stimulates glucosinolate accumulation and plant defense. DOI: 10.1111/j.1365-313X.2005.02435.x ; PMID: 15960618
- Arabidopsis female gametophyte gene expression map reveals similarities between plant and animal gametes. DOI: 10.1016/j.cub.2010.01.051 ; PMID: 20226671
- Recruitment of Arabidopsis RNA Helicase AtRH9 to the Viral Replication Complex by Viral Replicase to Promote Turnip Mosaic Virus Replication. DOI: 10.1038/srep30297 ; PMID: 27456972
Gene Resources
- UniProt: A0A654F5M8
- EMBL: CACRSJ010000106, CACSHJ010000089
- AlphaFoldDB: A0A654F5M8
- EnsemblPlants: AT3G09720.1, AT3G09720.2
- Gramene: AT3G09720.1, AT3G09720.2
- KEGG: ath:AT3G09720
- Orthologous matrix: EMAHSIM
- ExpressionAtlas: AT3G09720
- InterPro: IPR001650, IPR011545, IPR014001
- PANTHER: PTHR47959, PTHR47959:SF15
- SUPFAM: SSF52540
- PROSITE: PS51192, PS51194, PS51195
- Gene3D: 3.40.50.300
- OrthoDB: A0A654F5M8
- SWISS-MODEL: A0A654F5M8
- Conserved Domain Database: cd17957, cd18787
Homologs
- Brassica oleracea Bo4g182150
- Oryza sativa PRP5;OsRH42, OsRH2, OsRH34, DDX47;TOGR1, OseIF4A, eIF-4a;EIF4A, OsRH36, OsAIP2, OsAIP1;OsBAT1, OsRH17, OsABP
- Solanum tuberosum Soltu.DM.12G004370
Sequences
cDNA Sequence
- >AT3G09720.1
GTAAAACCCAAAATCTGCAAGAGTCTCTCTGGTTCTTCGATTCTTCTCGGTATCTATTCGCCGTCGTCAGTGTCATCGCCGGCGTTTTTAATTTCGTCTCTATTGTTACCATTATTGCTGCCTTTTCCTCTCCTCCGGAAACGCTCTCTTTCTCTATTTAGATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAACCTCAAATTTTGTCTTTTATATTTCTTGTTGTTGTTACATTGATGAATTAGTCTTGGTCTTTTGGATCCAAAACACTTTACACTGGCTAGAATCGGGAATCTAGTAGAATCGAACTTAGTTGTCACTTGGATCGTACTACGAAATACATATGTAACTCAAACCTAGTTACTATTCGATTGTGAGACTTCCGGTTTTTCATGTCGGATTCAATGATTTCTTAAGATGCATTATACCATAAGTTTTGGTTTGGTATAACTTTAAGAGCGATGTATATTATTTGGGTTGGGTTTAATCAAACCGGTTTTCTCCGAATTGGATAATACTTAAGTTCTTGCTTAGCTGGGGCATCACTCCAAATAATTATTGGAATTAAAGAGTAATAAATATCAATGATCTTCTTTGTTAAAATAAACGAATCATGACAACCAAATATTAGCTCAAAGTTAAGAAGGAAAGAGAAAAAACAAAACAATTGATTACATATTTTTCTAATTTTACAAAATTTGGGACAATAAAATCTATCAAACAATCTTAATATCATTTGTTCATAAGAAACAAAAAAAATTAGATTGGACCGACGGAGAGAGAGAATGATCCAAAACTCTGACTAACAAAACACAAGACGTGTGCATTATGTATATGTCTTTTCTAGATAATCAATTCCATTTTGAGGTTATTAACTAATATACAAAACAATACTTATGATTTAC - >AT3G09720.2
GTAAAACCCAAAATCTGCAAGAGTCTCTCTGGTTCTTCGATTCTTCTCGGTATCTATTCGCCGTCGTCAGTGTCATCGCCGGCGTTTTTAATTTCGTCTCTATTGTTACCATTATTGCTGCCTTTTCCTCTCCTCCGGAAACGCTCTCTTTCTCTATTTAGATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAACCTCAAATTTTGTCTTTTATATTTCTTGTTGTTGTTACATTGATGAATTAGTCTTGGTCTTTTGGATCCAAAACACTTTACACTGGCTAGAATCGGGAATCTAGTAGAATCGAACTTAGTTGTCACTTGGATCGTACTACGAAATACATATGTAACTCAAACCTAGTTACTATTCGATTGTGAGACTTCCGGTTTTTCATGTCGGATTCAATGATTTCTTAAGATGCATTATACCATAAGTTTTGGTTTGGTATAACTTTAAGAGCGATGTATATTATTTGGGTTGGGTTTAATCAAACCGGTTTTCTCCGAATTGGATAATACTTAAGTTCTTGCTTAGCTGGGGCATCACTCCAAATAATTATTGGAATTAAAGAGTAATAAATATCAATGATCTTCTTTGTTAAAATAAACGAATCATGACAACCAAATATTAGCTCAAAGTTAAGAAGGAAAGAGAAAAAACAAAACAATTGATTACATATTTTTCTAATTTTACAAAATTTGGGACAATAAAATCTATCAAACAATCTTAATATCATTTGTTCATAAGAAACAAAAAAAATTAGATTGGACCGACGGAGAGAGAGAATGATCCAAAACTCTGACTAACAAAACACAAGACGTGTGCATTATGTATATGTCTTTTCTAGATAATCAATTCCATTTTGAGGTTATTAACTAATATACAAAACAATACTTATGATTTAC
CDS Sequence
- >AT3G09720.1
ATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAA - >AT3G09720.2
ATGGAGAAAAGCTCATATTTTCTGTTTGGTGGAACAAACTTCAATAAGAAGAAGTTTGCTCCTGATTTTGCTAAATTCAAGAATTCTACGGAGGATGATGATTCCAATAAGAAAGTGAACTTCTTTGTGGAAGAAGAAGAGGACACTGAACAGCCGGAGGCGGAGAAAGTTATTGTGTCCTCTAAGAAGAGGAAACGAAGATCTTCTAATTCTGTGCCAGTTGAAGGATTCGATGTGTTCAAGAGCTCAAAGAAGGCACGTGCTAAAGGTAAAGCAGAAGAACAAATCACAAAGAATGAGATTGTAGAGAATCCCAAGAAGGAACTTAATCGTCAAATGGAGCGAGATGCTTTGTCGAGGAAACAGTACAGCATTCATGTTTCCGGTAACAATATTCCACCGCCGCTTAAAAGTTTCGCAGAGTTGTCATCCAGGTATGGCTGTGAAGGATACATATTACGCAATTTGGCTGAACTAGGATTTAAAGAGCCTACCCCAATCCAAAGACAGGCTATTCCAATTCTCCTATCGGGTCGTGAATGCTTTGCCTGTGCTCCGACTGGGTCAGGAAAAACCTTTGCTTTTATTTGTCCCATGCTTATAAAACTCAAGCGCCCTTCAACTGATGGAATAAGAGCTGTTATCCTTTCTCCTGCTCGGGAACTGGCTGCCCAAACAGCTAGAGAAGGAAAGAAACTTATTAAAGGAAGCAATTTCCACATTAGATTGATGACTAAACCCCTTGTCAAAACAGCTGACTTCTCAAAGCTGTGGTGTGATGTTCTCATATCAACGCCGATGCGGTTGAAAAGAGCAATCAAGGCTAAAAAGATTGACTTAAGCAAGGTCGAGTACCTTGTCCTTGATGAATCTGACAAGCTGTTTGAGCAGAGCTTGTTAAAGCAGATAGATTGTGTGGTTAAGGCTTGTTCAAATCCTTCGATCATACGTTCATTGTTCAGTGCTACTTTGCCCGATTCTGTTGAAGAACTTGCACGTTCCATAATGCATGATGCTGTTCGTGTTATCATTGGCCGAAAAAACACAGCATCTGAAACCGTCAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAACTTCTTGCTCTTCGCCAAAGCTTTGCAGAGAGTCTGAATCCACCGGTACTGATCTTTGTACAAAGCAAAGAACGAGCAAAAGAACTCTATGATGAACTGAAATGTGAAAACATCAGAGCCGGAGTCATCCATTCCGATCTCCCTCCGGGAGAGCGGGAAAATGCAGTTGATCAATTCAGAGCGGGAGAAAAATGGGTTTTGATAGCCACTGATGTGATTGCCAGAGGTATGGATTTCAAAGGCATCAACTGCGTGATAAACTATGATTTCCCGGATTCAGCTTCTGCATACATCCACAGGATTGGACGGTCTGGGAGAGCGGGAAGGAGCGGAGAAGCGATAACTTTCTACACGGAACAAGATGTGCCTTTCCTAAGGAACATAGCCAACACAATGATGTCATCAGGCTGTGAGGTTCCATCGTGGATCATGTCTTTGAAGAAGAAGAAATGGAGGAAGCATAGGCCGAGACGTGATTCTATATCTACTAAACCAAAAGCCGATAAAAACGATACAGATGAGTAA
Protein Sequence
- >AT3G09720.1
MEKSSYFLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVSSKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDALSRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCEVPSWIMSLKKKKWRKHRPRRDSISTKPKADKNDTDE - >AT3G09720.2
MEKSSYFLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVSSKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDALSRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCEVPSWIMSLKKKKWRKHRPRRDSISTKPKADKNDTDE