Information report for AT3G09630
Gene Details
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Functional Descriptions
- GO:0022626 — located in — cytosolic ribosome
- GO:0003735 — enables — structural constituent of ribosome
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0003729 — enables — mRNA binding
- GO:0005773 — located in — vacuole
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0022625 — located in — cytosolic large ribosomal subunit
- GO:0005829 — located in — cytosol
- GO:0003723 — enables — RNA binding
- GO:0009505 — located in — plant-type cell wall
- GO:0022625 — part of — cytosolic large ribosomal subunit
- GO:0006412 — involved in — translation
- GO:0005730 — located in — nucleolus
- GO:0005737 — located in — cytoplasm
- GO:0009506 — located in — plasmodesma
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- Structural and functional characteristics of cGMP-dependent methionine oxidation in Arabidopsis thaliana proteins. DOI: 10.1186/1478-811X-11-1 ; PMID: 23289948
- Mutations in ribosomal proteins, RPL4 and RACK1, suppress the phenotype of a thermospermine-deficient mutant of Arabidopsis thaliana. DOI: 10.1371/journal.pone.0117309 ; PMID: 25625317
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Structural and functional characteristics of cGMP-dependent methionine oxidation in Arabidopsis thaliana proteins. DOI: 10.1186/1478-811X-11-1 ; PMID: 23289948
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Gene Resources
- UniProt: Q2V3X4
- EMBL: CP002686
- AlphaFoldDB: Q2V3X4
- EnsemblPlants: AT3G09630.2
- Gramene: AT3G09630.2
- ExpressionAtlas: AT3G09630
- InterPro: IPR002136, IPR013000, IPR023574
Sequences
cDNA Sequence
- >AT3G09630.2
GCTGAGAGAAAACCCTAATTTCTCAAAGAGTCTAAAGAGACGGAGAGTGAGAGAAGAGAGAAACATTTCGAGACAAATGGCCGCCGCCGCTGCTCGTCCTCTCGTCACCATCCAAACCTTGGATGGTGACATGTCCACCGATCAATCCTCCACCGTCGTACTTCCCGACGTCATGACGGCGCCAGTTCGACCAGACATCGTTAACTTCGTTCACGCCCAAATCTCCAACAACAGCCGTCAGCCATACGCCGTATCGAAGAAGGCCGGTCACCAGACCTCCGCCGAGTCCTGGGGAACCGGACGTGCCGTGTCTCGTATCCCTCGTGTTCCCGGTGGTGGTACTCACCGTGCTGGTCAAGCTGCGTTCGGTAACATGTGTCGTGGTGGTCGTATGTTCGCTCCAACCAAGATCTGGCGCCGCTGGCACCGTCGTGTCAATGTCAACATGAAGCGTCACGCAATCGTCTCAGCTATCGCTGCAACTGCTGTTCCTGCGCTTGTGATGGCTCGTGGTCACAAGATCGAGAATGTTCCTGAGATGCCTCTTGTTGTGAGTGACTCCGCCGAAGCTGTGGAGAAGACCTCAGCTGCGATCAAGGTTTTGAAACAGATCGGTGCTTATGATGATGCTGAGAAGGCAAAGAACAGCATTGGAATCCGTCCTGGTAAAGGTAAAATGAGGAACCGTCGTTACATTTCTAGGAAAGGTCCTCTGGTGGTTTATGGAACTGAAGGATCTAAGATAGTTAAGGCGTTTAGAAACCTTCCTGGTGTTGAGCTTTGTCATGTGGAGAGGCTTAATTTGTTGAAGCTTGCTCCTGGTGGTCACCTTGGTCGGTTTGTGATCTGGACCAAGTCTGCCTTTGAGAAGCTTGAGTCTATCTATGGTTCGTTTGAGAAGCCATCAGAGAAGAAGAAGGGGTATGTGCTTCCTCGTGCAAAGATGGTGAATGCTGATCTTGCCAGGATTATCAATTCAGATGAGATTCAGAGTGTTGTGAATCCGATCAAGAAGGATGCGAAGAGGGCTGTTCTTAAGAAGAATCCATTGAAGAATCTCAATGTGATGTTGAAGTTGAATCCTTATGCTAAGACCGCGAAGAGGATGTCACTGTTAGCTGAAGCACAGAGAGTTAAGGCTAAGAAGGAGAAGCTCGCCAAGAAGAGGAAAACCGTTACCAAGGAGGCGTTGGCAATCAAAGCAGCAGGCAAGTCGTGGTACAAGACTATGATCTCCGACAGTGATTACACCGAGTTTGATAACTTCACCAAATGGCTCGGTGCTAGCCAGTAATAATCTCGTCTGCTTTGGAACACTTTCCATATTTTAGTCAAAAGATTTTGGTTTTTTTAATCTGTTTTGTCTTTGGGTGTCTGGATATCAAGTTGAATTATGAACAAGTTTCACTTTTTTACATCTCCATTTCTTACTTCGCCTTTATCAGTTTCATTTATTTATCTCTTGCTCCTTCGTTTCCTATGATGATGCTTGTTATGTTATGAACCTACTTAAAAACAAGCTGAAGCTTTCTTTGGTTTACCCCAGCAGAAACATTAATCAAGTTCAATTGATCAATATGTCGATTGATTTACTGTTT - >AT3G09630.1
GCTGAGAGAAAACCCTAATTTCTCAAAGAGTCTAAAGAGACGGAGAGTGAGAGAAGAGAGAAACATTTCGAGACAAATGGCCGCCGCCGCTGCTCGTCCTCTCGTCACCATCCAAACCTTGGATGGTGACATGTCCACCGATCAATCCTCCACCGTCGTACTTCCCGACGTCATGACGGCGCCAGTTCGACCAGACATCGTTAACTTCGTTCACGCCCAAATCTCCAACAACAGCCGTCAGCCATACGCCGTATCGAAGAAGGCCGGTCACCAGACCTCCGCCGAGTCCTGGGGAACCGGACGTGCCGTGTCTCGTATCCCTCGTGTTCCCGGTGGTGGTACTCACCGTGCTGGTCAAGCTGCGTTCGGTAACATGTGTCGTGGTGGTCGTATGTTCGCTCCAACCAAGATCTGGCGCCGCTGGCACCGTCGTGTCAATGTCAACATGAAGCGTCACGCAATCGTCTCAGCTATCGCTGCAACTGCTGTTCCTGCGCTTGTGATGGCTCGTGGTCACAAGATCGAGAATGTTCCTGAGATGCCTCTTGTTGTGAGTGACTCCGCCGAAGCTGTGGAGAAGACCTCAGCTGCGATCAAGGTTTTGAAACAGATCGGTGCTTATGATGATGCTGAGAAGGCAAAGAACAGCATTGGAATCCGTCCTGGTAAAGGTAAAATGAGGAACCGTCGTTACATTTCTAGGAAAGGTCCTCTGGTGGTTTATGGAACTGAAGGATCTAAGATAGTTAAGGCGTTTAGAAACCTTCCTGGTGTTGAGCTTTGTCATGTGGAGAGGCTTAATTTGTTGAAGCTTGCTCCTGGTGGTCACCTTGGTCGGTTTGTGATCTGGACCAAGTCTGCCTTTGAGAAGCTTGAGTCTATCTATGGTTCGTTTGAGAAGCCATCAGAGAAGAAGAAGGGGTATGTGCTTCCTCGTGCAAAGATGGTGAATGCTGATCTTGCCAGGATTATCAATTCAGATGAGATTCAGAGTGTTGTGAATCCGATCAAGAAGGATGCGAAGAGGGCTGTTCTTAAGAAGAATCCATTGAAGAATCTCAATGTGATGTTGAAGTTGAATCCTTATGCTAAGACCGCGAAGAGGATGTCACTGTTAGCTGAAGCACAGAGAGTTAAGGCTAAGAAGGAGAAGCTCGCCAAGAAGAGGAAAACCGTTACCAAGGAGGCGTTGGCAATCAAAGCAGCAGGCAAGTCGTGGTACAAGACTATGATCTCCGACAGTGATTACACCGAGTTTGATAACTTCACCAAATGGCTCGGTGCTAGCCAGTAATAATCTCGTCTGCTTTGGAACACTTTCCATATTTTAGTCAAAAGATTTTGGTTTTTTTAATCTGTTTTGTCTTTGGGTGTCTGGATATCAAGTTGAATTATGAACAAGTTTCACTTTTTTACATCTCCATTTCTTACTTCGCCTTTATCAGTTTCATTTATTTATCTCTTGCTCCTTCGTTTCCTATGATGATGCTTGTTATGTTATGAACCTACTTAAAAACAAGCTGAAGCTTTCTTTGGTTTACCCCAGCAGAAACATTAATCAAGTTCAATTGATCAATATGTCGATTGATTTACTGTTT
CDS Sequence
- >AT3G09630.2
ATGGCCGCCGCCGCTGCTCGTCCTCTCGTCACCATCCAAACCTTGGATGGTGACATGTCCACCGATCAATCCTCCACCGTCGTACTTCCCGACGTCATGACGGCGCCAGTTCGACCAGACATCGTTAACTTCGTTCACGCCCAAATCTCCAACAACAGCCGTCAGCCATACGCCGTATCGAAGAAGGCCGGTCACCAGACCTCCGCCGAGTCCTGGGGAACCGGACGTGCCGTGTCTCGTATCCCTCGTGTTCCCGGTGGTGGTACTCACCGTGCTGGTCAAGCTGCGTTCGGTAACATGTGTCGTGGTGGTCGTATGTTCGCTCCAACCAAGATCTGGCGCCGCTGGCACCGTCGTGTCAATGTCAACATGAAGCGTCACGCAATCGTCTCAGCTATCGCTGCAACTGCTGTTCCTGCGCTTGTGATGGCTCGTGGTCACAAGATCGAGAATGTTCCTGAGATGCCTCTTGTTGTGAGTGACTCCGCCGAAGCTGTGGAGAAGACCTCAGCTGCGATCAAGGTTTTGAAACAGATCGGTGCTTATGATGATGCTGAGAAGGCAAAGAACAGCATTGGAATCCGTCCTGGTAAAGGTAAAATGAGGAACCGTCGTTACATTTCTAGGAAAGGTCCTCTGGTGGTTTATGGAACTGAAGGATCTAAGATAGTTAAGGCGTTTAGAAACCTTCCTGGTGTTGAGCTTTGTCATGTGGAGAGGCTTAATTTGTTGAAGCTTGCTCCTGGTGGTCACCTTGGTCGGTTTGTGATCTGGACCAAGTCTGCCTTTGAGAAGCTTGAGTCTATCTATGGTTCGTTTGAGAAGCCATCAGAGAAGAAGAAGGGGTATGTGCTTCCTCGTGCAAAGATGGTGAATGCTGATCTTGCCAGGATTATCAATTCAGATGAGATTCAGAGTGTTGTGAATCCGATCAAGAAGGATGCGAAGAGGGCTGTTCTTAAGAAGAATCCATTGAAGAATCTCAATGTGATGTTGAAGTTGAATCCTTATGCTAAGACCGCGAAGAGGATGTCACTGTTAGCTGAAGCACAGAGAGTTAAGGCTAAGAAGGAGAAGCTCGCCAAGAAGAGGAAAACCGTTACCAAGGAGGCGTTGGCAATCAAAGCAGCAGGCAAGTCGTGGTACAAGACTATGATCTCCGACAGTGATTACACCGAGTTTGATAACTTCACCAAATGGCTCGGTGCTAGCCAGTAA - >AT3G09630.1
ATGGCCGCCGCCGCTGCTCGTCCTCTCGTCACCATCCAAACCTTGGATGGTGACATGTCCACCGATCAATCCTCCACCGTCGTACTTCCCGACGTCATGACGGCGCCAGTTCGACCAGACATCGTTAACTTCGTTCACGCCCAAATCTCCAACAACAGCCGTCAGCCATACGCCGTATCGAAGAAGGCCGGTCACCAGACCTCCGCCGAGTCCTGGGGAACCGGACGTGCCGTGTCTCGTATCCCTCGTGTTCCCGGTGGTGGTACTCACCGTGCTGGTCAAGCTGCGTTCGGTAACATGTGTCGTGGTGGTCGTATGTTCGCTCCAACCAAGATCTGGCGCCGCTGGCACCGTCGTGTCAATGTCAACATGAAGCGTCACGCAATCGTCTCAGCTATCGCTGCAACTGCTGTTCCTGCGCTTGTGATGGCTCGTGGTCACAAGATCGAGAATGTTCCTGAGATGCCTCTTGTTGTGAGTGACTCCGCCGAAGCTGTGGAGAAGACCTCAGCTGCGATCAAGGTTTTGAAACAGATCGGTGCTTATGATGATGCTGAGAAGGCAAAGAACAGCATTGGAATCCGTCCTGGTAAAGGTAAAATGAGGAACCGTCGTTACATTTCTAGGAAAGGTCCTCTGGTGGTTTATGGAACTGAAGGATCTAAGATAGTTAAGGCGTTTAGAAACCTTCCTGGTGTTGAGCTTTGTCATGTGGAGAGGCTTAATTTGTTGAAGCTTGCTCCTGGTGGTCACCTTGGTCGGTTTGTGATCTGGACCAAGTCTGCCTTTGAGAAGCTTGAGTCTATCTATGGTTCGTTTGAGAAGCCATCAGAGAAGAAGAAGGGGTATGTGCTTCCTCGTGCAAAGATGGTGAATGCTGATCTTGCCAGGATTATCAATTCAGATGAGATTCAGAGTGTTGTGAATCCGATCAAGAAGGATGCGAAGAGGGCTGTTCTTAAGAAGAATCCATTGAAGAATCTCAATGTGATGTTGAAGTTGAATCCTTATGCTAAGACCGCGAAGAGGATGTCACTGTTAGCTGAAGCACAGAGAGTTAAGGCTAAGAAGGAGAAGCTCGCCAAGAAGAGGAAAACCGTTACCAAGGAGGCGTTGGCAATCAAAGCAGCAGGCAAGTCGTGGTACAAGACTATGATCTCCGACAGTGATTACACCGAGTTTGATAACTTCACCAAATGGCTCGGTGCTAGCCAGTAA
Protein Sequence
- >AT3G09630.2
MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAKKRKTVTKEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ - >AT3G09630.1
MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAKKRKTVTKEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ