Information report for AT3G08690
Gene Details
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Functional Descriptions
- GO:0006511 — acts upstream of or within — ubiquitin-dependent protein catabolic process
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0006511 — involved in — ubiquitin-dependent protein catabolic process
- GO:0004842 — enables — ubiquitin-protein transferase activity
- GO:0005634 — is active in — nucleus
- GO:0061631 — enables — ubiquitin conjugating enzyme activity
Functional Keywords
Literature and News
- Ubiquitylation in plants: a post-genomic look at a post-translational modification. DOI: 10.1016/s1360-1385(01)02080-5 ; PMID: 11590065
- Protein degradation in signaling. DOI: 10.1016/s1369-5266(00)00100-x ; PMID: 11019805
- Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. DOI: 10.1104/pp.105.067983 ; PMID: 16339806
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Wheat germ-based protein libraries for the functional characterisation of the Arabidopsis E2 ubiquitin conjugating enzymes and the RING-type E3 ubiquitin ligase enzymes. DOI: 10.1186/s12870-015-0660-9 ; PMID: 26556605
- Protein degradation in signaling. DOI: 10.1016/s1369-5266(00)00100-x ; PMID: 11019805
- ORTH/VIM proteins that regulate DNA methylation are functional ubiquitin E3 ligases. DOI: 10.1111/j.1365-313X.2008.03631.x ; PMID: 18643997
Gene Resources
- UniProt: A0A654FFU9
- EMBL: CACRSJ010000106, CACSHJ010000089
- AlphaFoldDB: A0A654FFU9
- EnsemblPlants: AT3G08690.1, AT3G08690.2
- Gramene: AT3G08690.1, AT3G08690.2
- KEGG: ath:AT3G08690
- Orthologous matrix: DIENTHR
- ExpressionAtlas: AT3G08690
- InterPro: IPR000608, IPR016135, IPR023313
- PANTHER: PTHR24068
- SUPFAM: SSF54495
- PROSITE: PS00183, PS50127
- Gene3D: 3.10.110.10
- OrthoDB: A0A654FFU9
- SWISS-MODEL: A0A654FFU9
- Conserved Domain Database: cd23792
Homologs
- Actinidia chinensis Achn303171
- Brassica napus GSBRNA2T00018566001, BnaA06G0093900ZS
- Brassica oleracea Bol023045, Bo5g019560
- Brassica rapa Bra017410, Bra026222
- Gossypium hirsutum GhUCE
- Oryza sativa OsUBC5b, OsUBC18, OsUBC5a, OsCOP10, OsUBC13
- Triticum aestivum TRAES3BF061900010CFD_t1, TRAES3BF061700120CFD_t1
Sequences
cDNA Sequence
- >AT3G08690.1
GAGAATTAATAAATATATAGAAAAGGTGAAATAGGTGAGGCGGTACTTGCTGATAGAATCAGAAGCTTCGAGACTGACTTGTTTTAGATTCTCTGACTATAAAGAAAGGCAAAGTAACAAGTTTCGTTTTCTCCTTTGCACTCCATTTTTATTCTCGATTCTCTTCTCTCCCGATAAAGAAGCTCTCGCTTTGTGTTGTCCGTCCTTCTTCCAGGTTTTCTCGTCTCTGACGCATGGCTTCTAAGAGGATCTTGAAGGAGCTCAAGGATCTGCAGAAGGATCCTCCTTCAAACTGCAGCGCTGGTCCGGTGGCTGAGGACATGTTCCATTGGCAAGCCACTATCATGGGACCTCCTGAAAGTCCGTATGCCGGAGGAGTGTTTTTGGTTTCTATTCATTTCCCTCCGGATTATCCTTTCAAGCCACCAAAGGTGTCTTTTAAGACTAAGGTGTACCATCCAAACATCAATAGCAATGGAAGTATTTGCCTTGATATTTTGAAAGAGCAATGGAGCCCTGCTCTTACTATCTCTAAGGTTCTGTTGTCGATTTGCTCGCTGTTGACTGACCCAAACCCAGATGATCCTCTTGTGCCGGAGATAGCTCACATGTACAAGACAGATAGATCCAAGTACGAGTCAACTGCGAGAAGCTGGACACAAAAGTACGCAATGGGTTGATGATATAAGACAAAGCAAAGGATATGTTATTGCGCATCGGAATAAAATAATAACTTAAAAAAAATGCACTTGTTTGGTTTATCAAACGTTAGCAAGTATCGAACAACTTAGCTGCTCTTACTCCTCTTCTGTTCTGATCACTATAAACTAGTATTAATTTCGATTGTTGGGTCTACTTTTATTCTCTTGTTTCCCTCTCCTCACTTGGTTGCAGGAAACTGCAATTCTAATCGCCCCAAACGCAATGTTTGGACTGTTTTGGTACACTCTTGACATAAGGGGTTCCAATCTACACATGGATCAACCACAACCAAAACCAAACCAACTATGAGCCTTCCATAGTTAGGATTATACATTGCTCCCAAATACAAAACTCGTTCCTAATCTTCTATTAACTTATACCAAAGTTGGTATATTTATGATTAAATTA - >AT3G08690.2
GAGAATTAATAAATATATAGAAAAGGTGAAATAGGTGAGGCGGTACTTGCTGATAGAATCAGAAGCTTCGAGACTGACTTGTTTTAGATTCTCTGACTATAAAGAAAGGCAAAGTAACAAGTTTCGTTTTCTCCTTTGCACTCCATTTTTATTCTCGATTCTCTTCTCTCCCGATAAAGAAGCTCTCGCTTTGTGTTGTCCGTCCTTCTTCCAGGTTTTCTCGTCTCTGACGCATGGCTTCTAAGAGGATCTTGAAGGAGCTCAAGGATCTGCAGAAGGATCCTCCTTCAAACTGCAGCGCTGGTCCGGTGGCTGAGGACATGTTCCATTGGCAAGCCACTATCATGGGACCTCCTGAAAGTCCGTATGCCGGAGGAGTGTTTTTGGTTTCTATTCATTTCCCTCCGGATTATCCTTTCAAGCCACCAAAGGTGTCTTTTAAGACTAAGGTGTACCATCCAAACATCAATAGCAATGGAAGTATTTGCCTTGATATTTTGAAAGAGCAATGGAGCCCTGCTCTTACTATCTCTAAGGTTCTGTTGTCGATTTGCTCGCTGTTGACTGACCCAAACCCAGATGATCCTCTTGTGCCGGAGATAGCTCACATGTACAAGACAGATAGATCCAAGTACGAGTCAACTGCGAGAAGCTGGACACAAAAGTACGCAATGGGTTGATGATATAAGACAAAGCAAAGGATATGTTATTGCGCATCGGAATAAAATAATAACTTAAAAAAAATGCACTTGTTTGGTTTATCAAACGTTAGCAAGTATCGAACAACTTAGCTGCTCTTACTCCTCTTCTGTTCTGATCACTATAAACTAGTATTAATTTCGATTGTTGGGTCTACTTTTATTCTCTTGTTTCCCTCTCCTCACTTGGTTGCAGGAAACTGCAATTCTAATCGCCCCAAACGCAATGTTTGGACTGTTTTGGTACACTCTTGACATAAGGGGTTCCAATCTACACATGGATCAACCACAACCAAAACCAAACCAACTATGAGCCTTCCATAGTTAGGATTATACATTGCTCCCAAATACAAAACTCGTTCCTAATCTTCTATTAACTTATACCAAAGTTGGTATATTTATGATTAAATTA
CDS Sequence
- >AT3G08690.1
ATGGCTTCTAAGAGGATCTTGAAGGAGCTCAAGGATCTGCAGAAGGATCCTCCTTCAAACTGCAGCGCTGGTCCGGTGGCTGAGGACATGTTCCATTGGCAAGCCACTATCATGGGACCTCCTGAAAGTCCGTATGCCGGAGGAGTGTTTTTGGTTTCTATTCATTTCCCTCCGGATTATCCTTTCAAGCCACCAAAGGTGTCTTTTAAGACTAAGGTGTACCATCCAAACATCAATAGCAATGGAAGTATTTGCCTTGATATTTTGAAAGAGCAATGGAGCCCTGCTCTTACTATCTCTAAGGTTCTGTTGTCGATTTGCTCGCTGTTGACTGACCCAAACCCAGATGATCCTCTTGTGCCGGAGATAGCTCACATGTACAAGACAGATAGATCCAAGTACGAGTCAACTGCGAGAAGCTGGACACAAAAGTACGCAATGGGTTGA - >AT3G08690.2
ATGGCTTCTAAGAGGATCTTGAAGGAGCTCAAGGATCTGCAGAAGGATCCTCCTTCAAACTGCAGCGCTGGTCCGGTGGCTGAGGACATGTTCCATTGGCAAGCCACTATCATGGGACCTCCTGAAAGTCCGTATGCCGGAGGAGTGTTTTTGGTTTCTATTCATTTCCCTCCGGATTATCCTTTCAAGCCACCAAAGGTGTCTTTTAAGACTAAGGTGTACCATCCAAACATCAATAGCAATGGAAGTATTTGCCTTGATATTTTGAAAGAGCAATGGAGCCCTGCTCTTACTATCTCTAAGGTTCTGTTGTCGATTTGCTCGCTGTTGACTGACCCAAACCCAGATGATCCTCTTGTGCCGGAGATAGCTCACATGTACAAGACAGATAGATCCAAGTACGAGTCAACTGCGAGAAGCTGGACACAAAAGTACGCAATGGGTTGA
Protein Sequence
- >AT3G08690.1
MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG - >AT3G08690.2
MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG