Gene Details:
- Gene ID: AT3G08640
- Gene Symbol: RER3
- Gene Name: RETICULATA-RELATED 3
- Description: alphavirus core family protein (DUF3411);(source:Araport11)
- TAIR Accession: locus:2077838
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0003011 — root vascular system — sistema vascular de la raíz (Spanish, exact), 根維管系 (Japanese, exact), root vein (related)
- PO:0005660 — hydathode — hidatodo (Spanish, exact), 排水組織 (Japanese, exact)
- PO:0006023 — bundle sheath — vaina del haz (Spanish, exact), 維管束鞘 (Japanese, exact)
- PO:0006085 — root meristem — meristema de la raíz (Spanish, exact), 根分裂組織 (Japanese, exact), meristematic zone (related)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
Gene Ontology:
- GO:0009507 — located in — chloroplast
- GO:0009941 — located in — chloroplast envelope
- GO:0048366 — acts upstream of or within — leaf development
- GO:0003674 — enables — molecular_function
- GO:0005829 — located in — cytosol
- GO:0000302 — acts upstream of or within — response to reactive oxygen species
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0009648 — acts upstream of or within — photoperiodism
- GO:0009536 — located in — plastid
Function-related keywords:
Literature:
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Novel tonoplast transporters identified using a proteomic approach with vacuoles isolated from cauliflower buds. DOI: 10.1104/pp.107.096917 ; PMID: 17660356
- A putative hydroxysteroid dehydrogenase involved in regulating plant growth and development. DOI: 10.1104/pp.107.100560 ; PMID: 17616511
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional Redundancy and Divergence within the Arabidopsis RETICULATA-RELATED Gene Family. DOI: 10.1104/pp.113.217323 ; PMID: 23596191
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT3G08640.1
TTTAAAGCAAAGATCAGGTTTCGATTTCACCAAAAACCAAACACTGTGTCTTCCATCCTAAAGATTGTAAAGGGAAACCGTTTTCGATTTTCAGAGAAGATCACACATCTTTCGTCCCTTCACTGCCATACGTGTCGATAAAGATGGCGGCTATGGCGGCGAAGCTTCAGTTATCGGCGAAATCTGATCAAAGCAGTGTGCGATTACCGAGAGTGATCAACCTCTCCCGCGATCCAACGACTAGAGTCTCGTTTCCGCGAAATGGATCAGTTTGTTCCCTCCACACCAATTTCTCTTCTCCACATCTCGCGAAACCTTGCGCCGGAGGTGGTGGTGGTGGAAGCACCGGTAATAACGGCGGCGGAAGCGGAAGCGGAGGAGGAGGTGGTGGTTTTGGAGGTTCAGGGGGTGAAGCAAGTGAAGAATCATCTCCATGGGGACCAATAGGGTTATTCATCCAAGGATGGAGATCAAGAGTTGCAGCTGATCCTCAGTTCCCTTTTAAGGTACTAATGGAAGAGATCGTAGGACTTAGCGCTTGTGTTCTCGGTGACATGGCTTCACGACCTAATTTCGGATTAAACGAGCTAGATTTCGTCTTCTCCACGCTCGTTGTAGGTTCGATTCTCAATTTCGTACTCATGTACATGTTAGCTCCTACTGCAGCAACTCTTGGCTCCTCTCAGACTTTGCCTGGAATCTTTAGAAACTGTCCATCAAGCCATATGTTTGAACAGGGTAGCTTCACCGTTATGAACCGTTTCGGGACTCTTGTGTACAAAGGAATGGTTTTTGCTAGTGTAGGATTAGCTGCAGGTCTTGTAGGTACTGCCATTTCTAATGGGTTGATTATGCTGAGGAAGAAGATGGACCCGAGCTTCGAAACGCCAAACAAACCGCCACCGACTGTGCTTAATTCTTTAACTTGGGCAACTCATATGGGAGTGAGTGCGAATGCAAGGTACCAAACGTTGAATGGGATTGAGTTCTTGCTGGCAAAGGTGTTGCCCCCATTGGTGTTTAAGACAAGTGTGATAGTTTTGAGGTGTGCAAACAATGTTGCTGGAGGAATGTCGTTTGTTTTGTTGGCAAGGATGACGGGATCACAGTCGGTGGAGGAGAAGACAGAGATTTCAGAGAAAGAGAAGGATGATTGAATCTCATCCTAGTCTTTCAAGGTTTTTGTTCCTGTGTGTTTTTCGCCAGTTCATAGGCTTCTTGAGTTGAAACCATTTGTGTTGGAATAAATAAGATGAATCCCTTCTTAGGTCCATCCTATTGGATGTCATTGTTAGGCCAAGTTTGTTGTTTTCTTTTTCAGTTACCATGAATATAATAACTCAATAAAAAGGTTATAAATTACAAATAAAGATCGAATGATTTACTTATCGAATATGTGAAAAACTTCATTCTGTTGTGGTGCTCTCTATTTATTGTTTAATAAAAACCTGATTGAAGCA
CDS Sequence
- >AT3G08640.1
ATGGCGGCTATGGCGGCGAAGCTTCAGTTATCGGCGAAATCTGATCAAAGCAGTGTGCGATTACCGAGAGTGATCAACCTCTCCCGCGATCCAACGACTAGAGTCTCGTTTCCGCGAAATGGATCAGTTTGTTCCCTCCACACCAATTTCTCTTCTCCACATCTCGCGAAACCTTGCGCCGGAGGTGGTGGTGGTGGAAGCACCGGTAATAACGGCGGCGGAAGCGGAAGCGGAGGAGGAGGTGGTGGTTTTGGAGGTTCAGGGGGTGAAGCAAGTGAAGAATCATCTCCATGGGGACCAATAGGGTTATTCATCCAAGGATGGAGATCAAGAGTTGCAGCTGATCCTCAGTTCCCTTTTAAGGTACTAATGGAAGAGATCGTAGGACTTAGCGCTTGTGTTCTCGGTGACATGGCTTCACGACCTAATTTCGGATTAAACGAGCTAGATTTCGTCTTCTCCACGCTCGTTGTAGGTTCGATTCTCAATTTCGTACTCATGTACATGTTAGCTCCTACTGCAGCAACTCTTGGCTCCTCTCAGACTTTGCCTGGAATCTTTAGAAACTGTCCATCAAGCCATATGTTTGAACAGGGTAGCTTCACCGTTATGAACCGTTTCGGGACTCTTGTGTACAAAGGAATGGTTTTTGCTAGTGTAGGATTAGCTGCAGGTCTTGTAGGTACTGCCATTTCTAATGGGTTGATTATGCTGAGGAAGAAGATGGACCCGAGCTTCGAAACGCCAAACAAACCGCCACCGACTGTGCTTAATTCTTTAACTTGGGCAACTCATATGGGAGTGAGTGCGAATGCAAGGTACCAAACGTTGAATGGGATTGAGTTCTTGCTGGCAAAGGTGTTGCCCCCATTGGTGTTTAAGACAAGTGTGATAGTTTTGAGGTGTGCAAACAATGTTGCTGGAGGAATGTCGTTTGTTTTGTTGGCAAGGATGACGGGATCACAGTCGGTGGAGGAGAAGACAGAGATTTCAGAGAAAGAGAAGGATGATTGA
Protein Sequence
- >AT3G08640.1
MAAMAAKLQLSAKSDQSSVRLPRVINLSRDPTTRVSFPRNGSVCSLHTNFSSPHLAKPCAGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGSSQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIVLRCANNVAGGMSFVLLARMTGSQSVEEKTEISEKEKDD