Information report for AT3G08580
Gene Details
|
|
Functional Descriptions
- PO:0005020 — vascular bundle — haz vascular (Spanish, exact), vein (exact), 維管束 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0015865 — acts upstream of or within — purine nucleotide transport
- GO:0005471 — enables — ATP:ADP antiporter activity
- GO:0000325 — located in — plant-type vacuole
- GO:0005730 — located in — nucleolus
- GO:0009507 — located in — chloroplast
- GO:0005739 — located in — mitochondrion
- GO:0009941 — located in — chloroplast envelope
- GO:0005886 — located in — plasma membrane
- GO:0005507 — enables — copper ion binding
- GO:1990544 — involved in — mitochondrial ATP transmembrane transport
- GO:0005773 — located in — vacuole
- GO:0140021 — involved in — mitochondrial ADP transmembrane transport
- GO:0005740 — located in — mitochondrial envelope
- GO:0005515 — enables — protein binding
- GO:0009505 — located in — plant-type cell wall
- GO:0003729 — enables — mRNA binding
- GO:0005829 — located in — cytosol
Functional Keywords
Literature and News
- Full-length messenger RNA sequences greatly improve genome annotation. DOI: 10.1186/gb-2002-3-6-research0029 ; PMID: 12093376
- Genomic and proteomic analysis of mitochondrial carrier proteins in Arabidopsis. DOI: 10.1104/pp.009985 ; PMID: 12586869
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- The Arabidopsis root transcriptome by serial analysis of gene expression. Gene identification using the genome sequence. DOI: 10.1104/pp.103.030536 ; PMID: 14730065
- Transcriptome analysis of O3-exposed Arabidopsis reveals that multiple signal pathways act mutually antagonistically to induce gene expression. DOI: 10.1023/B:PLAN.0000019064.55734.52 ; PMID: 15010611
- The growing family of mitochondrial carriers in Arabidopsis. DOI: 10.1016/j.tplants.2004.01.007 ; PMID: 15003237
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Evaluation of two-dimensional electrophoresis and liquid chromatography–tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples. DOI: 10.1002/elps.200410399 ; PMID: 15971193
- The maize root transcriptome by serial analysis of gene expression. DOI: 10.1104/pp.104.057638 ; PMID: 15965024
- Folate metabolism in plants: an Arabidopsis homolog of the mammalian mitochondrial folate transporter mediates folate import into chloroplasts. DOI: 10.1074/jbc.M506045200 ; PMID: 16055441
- Protein profiling of plastoglobules in chloroplasts and chromoplasts. A surprising site for differential accumulation of metabolic enzymes. DOI: 10.1104/pp.105.076083 ; PMID: 16461379
- A quantitative analysis of Arabidopsis plasma membrane using trypsin-catalyzed (18)O labeling. DOI: 10.1074/mcp.M500414-MCP200 ; PMID: 16635983
- Natural variation for carbohydrate content in Arabidopsis. Interaction with complex traits dissected by quantitative genetics. DOI: 10.1104/pp.106.082396 ; PMID: 16798941
- EST database for early flower development in California poppy (Eschscholzia californica Cham., Papaveraceae) tags over 6,000 genes from a basal eudicot. DOI: 10.1007/s11103-006-9025-y ; PMID: 16915518
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Novel tonoplast transporters identified using a proteomic approach with vacuoles isolated from cauliflower buds. DOI: 10.1104/pp.107.096917 ; PMID: 17660356
- Identification of a novel adenine nucleotide transporter in the endoplasmic reticulum of Arabidopsis. DOI: 10.1105/tpc.107.057554 ; PMID: 18296626
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification and characterization of ADNT1, a novel mitochondrial adenine nucleotide transporter from Arabidopsis. DOI: 10.1104/pp.108.130310 ; PMID: 18923018
- Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. DOI: 10.1104/pp.109.147942 ; PMID: 20018591
- Proteomics investigation of endogenous S-nitrosylation in Arabidopsis. DOI: 10.1016/j.bbrc.2011.11.036 ; PMID: 22115780
- A proteomics approach identifies novel proteins involved in gravitropic signal transduction. DOI: 10.3732/ajb.1200339 ; PMID: 23281391
- Arabidopsis thaliana MSI4/FVE associates with members of a novel family of plant specific PWWP/RRM domain proteins. DOI: 10.1007/s11103-014-0280-z ; PMID: 25600937
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Evaluation of two-dimensional electrophoresis and liquid chromatography–tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples. DOI: 10.1002/elps.200410399 ; PMID: 15971193
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Evaluation of two-dimensional electrophoresis and liquid chromatography–tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples. DOI: 10.1002/elps.200410399 ; PMID: 15971193
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: Q0WVD8
- EMBL: AK226814
- AlphaFoldDB: Q0WVD8
- EnsemblPlants: AT3G08580.1, AT3G08580.2
- Gramene: AT3G08580.1, AT3G08580.2
- KEGG: ath:AT3G08580
- Orthologous matrix: MYQRHAT
- ExpressionAtlas: AT3G08580
- InterPro: IPR002067, IPR002113, IPR018108
- PANTHER: PTHR45635, PTHR45635:SF41
- SUPFAM: SSF103506
- PROSITE: PS50920
- Gene3D: 1.50.40.10
- OrthoDB: Q0WVD8
- SWISS-MODEL: Q0WVD8
Homologs
- Daucus carota DCAR_021252
- Oryza sativa ER-ANT1, OsPAPST1, OsBT1-3, OsBT1-2, OsBT1-1;OsBT1, OsUCP2
- Prunus avium Pav_sc0001411.1_g200.1.mk
- Triticum aestivum TaBT1-6B, TaBT1-6D, TaBT1-6A
Sequences
cDNA Sequence
- >AT3G08580.1
GTTATATTCGTTTCTTCGATCTGTGTTTTTTAGATCTGTAAGAGTTCAAAATGGTTGATCAAGTTCAGCACCCCACTATTGCGCAGAAAGCTGCCGGGCAGTTCATGCGTTCAAGTGTTTCCAAGGACGTTCAAGTGGGTTACCAGAGGCCTTCTATGTATCAAAGACATGCAACCTACGGAAACTACTCCAATGCTGCATTTCAATTTCCTCCGACATCCCGGATGTTGGCAACAACTGCTTCTCCCGTGTTTGTCCAAACCCCAGGAGAGAAGGGGTTCACTAACTTTGCCCTTGACTTTCTGATGGGTGGTGTTTCTGCTGCCGTCTCCAAGACTGCTGCTGCTCCTATTGAACGTGTTAAGCTTTTGATCCAGAACCAGGATGAGATGATTAAAGCTGGCAGGCTTTCTGAACCCTACAAGGGTATTGGTGACTGTTTCGGCAGGACGATTAAGGATGAAGGTTTTGGTTCTCTATGGAGAGGAAACACTGCCAATGTTATCCGTTATTTCCCCACTCAGGCCTTGAACTTTGCCTTCAAAGATTACTTCAAAAGACTTTTCAACTTTAAGAAGGACAGAGATGGTTACTGGAAGTGGTTTGCTGGTAACTTGGCATCTGGAGGAGCAGCTGGTGCCTCTTCCCTTCTGTTTGTGTACTCCCTTGACTATGCCCGTACCCGTCTAGCTAATGATGCCAAGGCTGCAAAGAAAGGAGGTGGTGGAAGACAGTTTGATGGTCTTGTTGATGTCTACAGAAAGACACTTAAGACTGATGGTATTGCTGGTCTGTACCGTGGATTCAACATCTCATGTGTTGGTATCATTGTCTACCGTGGTCTGTACTTTGGACTCTATGACTCTGTGAAGCCTGTTCTCCTCACTGGTGACTTACAGGACAGTTTCTTCGCTAGTTTCGCTCTTGGATGGGTTATTACCAATGGTGCGGGTCTTGCATCCTACCCCATTGACACTGTCCGCAGAAGAATGATGATGACGTCTGGTGAAGCTGTCAAGTACAAGAGTTCTTTGGACGCCTTCAAGCAGATCCTCAAGAATGAAGGAGCCAAGTCACTCTTCAAGGGAGCTGGTGCCAACATTCTGCGTGCTGTTGCAGGTGCTGGTGTGCTTTCCGGTTACGACAAATTGCAGCTGATTGTCTTCGGTAAGAAGTACGGATCAGGAGGTGCCTAAGCATTGCTTCTTCCTCCTTTTTTCGATTTTAATTGCGGTTTTAAGGCCCGCAATAAACTGAGATGTTGATGAAATTTTTTTTGCTTAAGACTTAGGGAGGCATGTGCCCTAAACCAAATTTTATATCGTTCTGACGCCAACTTTTTTTACTTATGGAATAATTCATGTTTGAGAGAGTTTGTTAGACTCTTCGATTTTAAAGAATTTTGGATTTATGAAATAAATTCTTCTTTTTTATCTGATTACCATGTTATTTATAGTCTT - >AT3G08580.2
GTTATATTCGTTTCTTCGATCTGTGTTTTTTAGATCTGTAAGAGTTCAAAATGGTTGATCAAGTTCAGCACCCCACTATTGCGCAGAAAGCTGCCGGGCAGTTCATGCGTTCAAGTGTTTCCAAGGACGTTCAAGTGGGTTACCAGAGGCCTTCTATGTATCAAAGACATGCAACCTACGGAAACTACTCCAATGCTGCATTTCAATTTCCTCCGACATCCCGGATGTTGGCAACAACTGCTTCTCCCGTGTTTGTCCAAACCCCAGGAGAGAAGGGGTTCACTAACTTTGCCCTTGACTTTCTGATGGGTGGTGTTTCTGCTGCCGTCTCCAAGACTGCTGCTGCTCCTATTGAACGTGTTAAGCTTTTGATCCAGAACCAGGATGAGATGATTAAAGCTGGCAGGCTTTCTGAACCCTACAAGGGTATTGGTGACTGTTTCGGCAGGACGATTAAGGATGAAGGTTTTGGTTCTCTATGGAGAGGAAACACTGCCAATGTTATCCGTTATTTCCCCACTCAGGCCTTGAACTTTGCCTTCAAAGATTACTTCAAAAGACTTTTCAACTTTAAGAAGGACAGAGATGGTTACTGGAAGTGGTTTGCTGGTAACTTGGCATCTGGAGGAGCAGCTGGTGCCTCTTCCCTTCTGTTTGTGTACTCCCTTGACTATGCCCGTACCCGTCTAGCTAATGATGCCAAGGCTGCAAAGAAAGGAGGTGGTGGAAGACAGTTTGATGGTCTTGTTGATGTCTACAGAAAGACACTTAAGACTGATGGTATTGCTGGTCTGTACCGTGGATTCAACATCTCATGTGTTGGTATCATTGTCTACCGTGGTCTGTACTTTGGACTCTATGACTCTGTGAAGCCTGTTCTCCTCACTGGTGACTTACAGGACAGTTTCTTCGCTAGTTTCGCTCTTGGATGGGTTATTACCAATGGTGCGGGTCTTGCATCCTACCCCATTGACACTGTCCGCAGAAGAATGATGATGACGTCTGGTGAAGCTGTCAAGTACAAGAGTTCTTTGGACGCCTTCAAGCAGATCCTCAAGAATGAAGGAGCCAAGTCACTCTTCAAGGGAGCTGGTGCCAACATTCTGCGTGCTGTTGCAGGTGCTGGTGTGCTTTCCGGTTACGACAAATTGCAGCTGATTGTCTTCGGTAAGAAGTACGGATCAGGAGGTGCCTAAGCATTGCTTCTTCCTCCTTTTTTCGATTTTAATTGCGGTTTTAAGGCCCGCAATAAACTGAGATGTTGATGAAATTTTTTTTGCTTAAGACTTAGGGAGGCATGTGCCCTAAACCAAATTTTATATCGTTCTGACGCCAACTTTTTTTACTTATGGAATAATTCATGTTTGAGAGAGTTTGTTAGACTCTTCGATTTTAAAGAATTTTGGATTTATGAAATAAATTCTTCTTTTTTATCTGATTACCATGTTATTTATAGTCTT
CDS Sequence
- >AT3G08580.1
ATGGTTGATCAAGTTCAGCACCCCACTATTGCGCAGAAAGCTGCCGGGCAGTTCATGCGTTCAAGTGTTTCCAAGGACGTTCAAGTGGGTTACCAGAGGCCTTCTATGTATCAAAGACATGCAACCTACGGAAACTACTCCAATGCTGCATTTCAATTTCCTCCGACATCCCGGATGTTGGCAACAACTGCTTCTCCCGTGTTTGTCCAAACCCCAGGAGAGAAGGGGTTCACTAACTTTGCCCTTGACTTTCTGATGGGTGGTGTTTCTGCTGCCGTCTCCAAGACTGCTGCTGCTCCTATTGAACGTGTTAAGCTTTTGATCCAGAACCAGGATGAGATGATTAAAGCTGGCAGGCTTTCTGAACCCTACAAGGGTATTGGTGACTGTTTCGGCAGGACGATTAAGGATGAAGGTTTTGGTTCTCTATGGAGAGGAAACACTGCCAATGTTATCCGTTATTTCCCCACTCAGGCCTTGAACTTTGCCTTCAAAGATTACTTCAAAAGACTTTTCAACTTTAAGAAGGACAGAGATGGTTACTGGAAGTGGTTTGCTGGTAACTTGGCATCTGGAGGAGCAGCTGGTGCCTCTTCCCTTCTGTTTGTGTACTCCCTTGACTATGCCCGTACCCGTCTAGCTAATGATGCCAAGGCTGCAAAGAAAGGAGGTGGTGGAAGACAGTTTGATGGTCTTGTTGATGTCTACAGAAAGACACTTAAGACTGATGGTATTGCTGGTCTGTACCGTGGATTCAACATCTCATGTGTTGGTATCATTGTCTACCGTGGTCTGTACTTTGGACTCTATGACTCTGTGAAGCCTGTTCTCCTCACTGGTGACTTACAGGACAGTTTCTTCGCTAGTTTCGCTCTTGGATGGGTTATTACCAATGGTGCGGGTCTTGCATCCTACCCCATTGACACTGTCCGCAGAAGAATGATGATGACGTCTGGTGAAGCTGTCAAGTACAAGAGTTCTTTGGACGCCTTCAAGCAGATCCTCAAGAATGAAGGAGCCAAGTCACTCTTCAAGGGAGCTGGTGCCAACATTCTGCGTGCTGTTGCAGGTGCTGGTGTGCTTTCCGGTTACGACAAATTGCAGCTGATTGTCTTCGGTAAGAAGTACGGATCAGGAGGTGCCTAA - >AT3G08580.2
ATGGTTGATCAAGTTCAGCACCCCACTATTGCGCAGAAAGCTGCCGGGCAGTTCATGCGTTCAAGTGTTTCCAAGGACGTTCAAGTGGGTTACCAGAGGCCTTCTATGTATCAAAGACATGCAACCTACGGAAACTACTCCAATGCTGCATTTCAATTTCCTCCGACATCCCGGATGTTGGCAACAACTGCTTCTCCCGTGTTTGTCCAAACCCCAGGAGAGAAGGGGTTCACTAACTTTGCCCTTGACTTTCTGATGGGTGGTGTTTCTGCTGCCGTCTCCAAGACTGCTGCTGCTCCTATTGAACGTGTTAAGCTTTTGATCCAGAACCAGGATGAGATGATTAAAGCTGGCAGGCTTTCTGAACCCTACAAGGGTATTGGTGACTGTTTCGGCAGGACGATTAAGGATGAAGGTTTTGGTTCTCTATGGAGAGGAAACACTGCCAATGTTATCCGTTATTTCCCCACTCAGGCCTTGAACTTTGCCTTCAAAGATTACTTCAAAAGACTTTTCAACTTTAAGAAGGACAGAGATGGTTACTGGAAGTGGTTTGCTGGTAACTTGGCATCTGGAGGAGCAGCTGGTGCCTCTTCCCTTCTGTTTGTGTACTCCCTTGACTATGCCCGTACCCGTCTAGCTAATGATGCCAAGGCTGCAAAGAAAGGAGGTGGTGGAAGACAGTTTGATGGTCTTGTTGATGTCTACAGAAAGACACTTAAGACTGATGGTATTGCTGGTCTGTACCGTGGATTCAACATCTCATGTGTTGGTATCATTGTCTACCGTGGTCTGTACTTTGGACTCTATGACTCTGTGAAGCCTGTTCTCCTCACTGGTGACTTACAGGACAGTTTCTTCGCTAGTTTCGCTCTTGGATGGGTTATTACCAATGGTGCGGGTCTTGCATCCTACCCCATTGACACTGTCCGCAGAAGAATGATGATGACGTCTGGTGAAGCTGTCAAGTACAAGAGTTCTTTGGACGCCTTCAAGCAGATCCTCAAGAATGAAGGAGCCAAGTCACTCTTCAAGGGAGCTGGTGCCAACATTCTGCGTGCTGTTGCAGGTGCTGGTGTGCTTTCCGGTTACGACAAATTGCAGCTGATTGTCTTCGGTAAGAAGTACGGATCAGGAGGTGCCTAA
Protein Sequence
- >AT3G08580.1
MVDQVQHPTIAQKAAGQFMRSSVSKDVQVGYQRPSMYQRHATYGNYSNAAFQFPPTSRMLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIVFGKKYGSGGA - >AT3G08580.2
MVDQVQHPTIAQKAAGQFMRSSVSKDVQVGYQRPSMYQRHATYGNYSNAAFQFPPTSRMLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIVFGKKYGSGGA