Information report for AT3G08030
Gene Details
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Functional Descriptions
- GO:0071407 — acts upstream of or within — cellular response to organic cyclic compound
- GO:0009507 — located in — chloroplast
- GO:0005886 — located in — plasma membrane
- GO:0099503 — located in — secretory vesicle
- GO:0031347 — acts upstream of or within — regulation of defense response
- GO:0071396 — acts upstream of or within — cellular response to lipid
- GO:0009505 — located in — plant-type cell wall
- GO:0010565 — acts upstream of or within — regulation of cellular ketone metabolic process
- GO:0005643 — located in — nuclear pore
- GO:0098542 — acts upstream of or within — defense response to other organism
- GO:0010646 — acts upstream of or within — regulation of cell communication
- GO:1901701 — acts upstream of or within — cellular response to oxygen-containing compound
- GO:0009888 — acts upstream of or within — tissue development
- GO:0032787 — acts upstream of or within — monocarboxylic acid metabolic process
- GO:0023051 — acts upstream of or within — regulation of signaling
- GO:0007165 — acts upstream of or within — signal transduction
- GO:0003674 — enables — molecular_function
- GO:1901615 — acts upstream of or within — organic hydroxy compound metabolic process
Functional Keywords
Literature and News
- Proteomic analysis of changes in the extracellular matrix of Arabidopsis cell suspension cultures induced by fungal elicitors. DOI: 10.1002/pmic.200300413 ; PMID: 12833529
- Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. DOI: 10.1002/pmic.200400882 ; PMID: 15593128
- A proteomic approach to apoplastic proteins involved in cell wall regeneration in protoplasts of Arabidopsis suspension-cultured cells. DOI: 10.1093/pcp/pci089 ; PMID: 15769804
- Expression profiling of auxin-treated Arabidopsis roots: toward a molecular analysis of lateral root emergence. DOI: 10.1093/pcp/pcj043 ; PMID: 16621846
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- Proline Hydroxylation in Cell Wall Proteins: Is It Yet Possible to Define Rules? DOI: 10.3389/fpls.2017.01802 ; PMID: 29089960
- Overview of the Role of Cell Wall DUF642 Proteins in Plant Development. DOI: 10.3390/ijms20133333 ; PMID: 31284602
- Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. DOI: 10.1002/pmic.200400882 ; PMID: 15593128
- Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. DOI: 10.1002/pmic.200400882 ; PMID: 15593128
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: Q9SFB1
- EMBL: AC013483, AY072318, AY086764
- AlphaFoldDB: Q9SFB1
- EnsemblPlants: AT3G08030.1
- Gramene: AT3G08030.1
- KEGG: ath:AT3G08030
- Orthologous matrix: NDYGALC
- ExpressionAtlas: AT3G08030
- InterPro: IPR006946, IPR052437
- PANTHER: PTHR31265, PTHR31265:SF2
- Gene3D: 2.60.120.260
- OrthoDB: Q9SFB1
Homologs
- Brassica napus BnaA02G0040000ZS
- Brassica rapa Bra011349
- Capsicum annuum T459_21618
- Citrullus lanatus Cla97C08G156430
- Cucumis melo MELO3C011233
- Cucumis sativus CsGy2G022990
- Lactuca sativa gene-LSAT_6X22100
- Manihot esculenta MANES_16G119100
- Nicotiana attenuata A4A49_04968
- Populus trichocarpa POPTR_018G031100v3, POPTR_006G250100v3
- Prunus persica PRUPE_1G472800
- Rosa chinensis RchiOBHm_Chr6g0298661
- Solanum lycopersicum Solyc08g067030.3
- Solanum tuberosum PGSC0003DMG400029086
Sequences
cDNA Sequence
- >AT3G08030.1
CTAACTTTAGTTCCTCTCAATTTCTCTTATTACCATACAAAATTTACTAATTACTGTACAAAAATTACCAAATAAAAGGCCACAAATATCTTAGGAAGAAATGAAGCAAGGCACAAGTGCCAATACGAGATTAGAGAGCATGAATTAAGGAGAAAAGTCGGTTTCGGTTCAGTAAGACAGACAGACAAAATCCATCGTTGGGGTCCAGTCACATTACCTCTTTCTACGTGATTTCCTCTCTCTCCACTCGCTTTTAATCCTTTCACTTGTATAAAGTCGTAGCATCTCGAGATCGTCTTCCTCTCACAATCTCAAATTCTTCGGACCTTTTCTCTCTCCCCTGAAGCTCCCCTCACTCACTCTTCTCCGAGGAAGAACAACAGAGACAATGGCGGTTCCCAAAGCCATTATTCTACCTATCTTGCTACTCATCTGTGGTGCTGCTCTCGGAGCTCCTGCTTCTGAAGGTTATCTTCGTAATGGAAACTTCGAAGAGTCACCAAAGAAAACCGACATGAAGAAAACAGTTCTACTAGGCAAAAACGCCTTGCCCGAATGGGAAACCACCGGTTTCGTCGAGTACATCGCCGGCGGTCCTCAGCCAGGAGGCATGTACTTCCCAGTGGCTCATGGAGTCCACGCCGTGAGGCTCGGAAACGAAGCTACAATCTCTCAGAAGTTAGAAGTGAAGCCAGGTTCTCTCTACGCACTCACGTTTGGTGCGTCGAGAACTTGTGCACAAGACGAAGTTCTTAGAGTCTCTGTACCTTCTCAGTCCGGTGACTTGCCACTTCAAACACTTTACAACAGTTTCGGAGGTGACGTGTACGCTTGGGCCTTCGTCGCCAAGACTTCTCAAGTTACTGTGACTTTCCACAATCCTGGAGTTCAAGAAGATCCTGCTTGTGGTCCTTTGTTGGACGCTGTCGCCATTAAAGAGCTTGTTCATCCAATCTACACCAGAGGGAACTTGGTGAAGAATGGAGGGTTCGAAGAAGGTCCTCACCGTCTAGTGAACTCCACACAAGGAGTCCTACTCCCACCTAAACAAGAAGATCTCACATCACCTTTACCTGGTTGGATCATAGAGTCACTCAAGGCAGTGAAATTCATAGACTCTAAGTACTTTAATGTCCCCTTTGGACATGCTGCGATCGAGCTAGTTGCAGGCAAAGAAAGTGCCATTGCACAAGTCATTAGAACCTCTCCTGGTCAAACTTACACCCTCTCCTTCGTCGTTGGAGATGCTAAGAATGACTGCCATGGTTCCATGATGGTTGAAGCTTTTGCAGCCAGAGATACACTCAAAGTACCACACACTTCCGTTGGTGGAGGTCATGTCAAGACCGCGAGTTTCAAGTTCAAGGCGGTTGAGGCAAGAACTAGAATTACTTTCTTCAGTGGTTTTTACCATACCAAGAAGACTGATACTGTATCTTTATGTGGTCCTGTCATTGACGAGATTGTGGTTTCTCATGTCGCTTAGATTAAGTTTACTCTTTATGACAACTGCACTTGTGTTCTTAGACTGGTCATGGACTTGGTGCCTTGCTTTGTATGTCTTGGCTCCTTTTGGAATTGAGTTATTGTCATCAAGTTAAAATGAATGATATATTATTGTAATATGAAATGTTTTGAGTTAAACGAATACCAAGAAGTATAATCTAGGACATTCCAAAAAGTGCAAGGAAATTAATACCTATAAAGTA - >AT3G08030.2
CTAACTTTAGTTCCTCTCAATTTCTCTTATTACCATACAAAATTTACTAATTACTGTACAAAAATTACCAAATAAAAGGCCACAAATATCTTAGGAAGAAATGAAGCAAGGCACAAGTGCCAATACGAGATTAGAGAGCATGAATTAAGGAGAAAAGTCGGTTTCGGTTCAGTAAGACAGACAGACAAAATCCATCGTTGGGGTCCAGTCACATTACCTCTTTCTACGTGATTTCCTCTCTCTCCACTCGCTTTTAATCCTTTCACTTGTATAAAGTCGTAGCATCTCGAGATCGTCTTCCTCTCACAATCTCAAATTCTTCGGACCTTTTCTCTCTCCCCTGAAGCTCCCCTCACTCACTCTTCTCCGAGGAAGAACAACAGAGACAATGGCGGTTCCCAAAGCCATTATTCTACCTATCTTGCTACTCATCTGTGGTGCTGCTCTCGGAGCTCCTGCTTCTGAAGGTTATCTTCGTAATGGAAACTTCGAAGAGTCACCAAAGAAAACCGACATGAAGAAAACAGTTCTACTAGGCAAAAACGCCTTGCCCGAATGGGAAACCACCGGTTTCGTCGAGTACATCGCCGGCGGTCCTCAGCCAGGAGGCATGTACTTCCCAGTGGCTCATGGAGTCCACGCCGTGAGGCTCGGAAACGAAGCTACAATCTCTCAGAAGTTAGAAGTGAAGCCAGGTTCTCTCTACGCACTCACGTTTGGTGCGTCGAGAACTTGTGCACAAGACGAAGTTCTTAGAGTCTCTGTACCTTCTCAGTCCGGTGACTTGCCACTTCAAACACTTTACAACAGTTTCGGAGGTGACGTGTACGCTTGGGCCTTCGTCGCCAAGACTTCTCAAGTTACTGTGACTTTCCACAATCCTGGAGTTCAAGAAGATCCTGCTTGTGGTCCTTTGTTGGACGCTGTCGCCATTAAAGAGCTTGTTCATCCAATCTACACCAGAGGGAACTTGGTGAAGAATGGAGGGTTCGAAGAAGGTCCTCACCGTCTAGTGAACTCCACACAAGGAGTCCTACTCCCACCTAAACAAGAAGATCTCACATCACCTTTACCTGGTTGGATCATAGAGTCACTCAAGGCAGTGAAATTCATAGACTCTAAGTACTTTAATGTCCCCTTTGGACATGCTGCGATCGAGCTAGTTGCAGGCAAAGAAAGTGCCATTGCACAAGTCATTAGAACCTCTCCTGGTCAAACTTACACCCTCTCCTTCGTCGTTGGAGATGCTAAGAATGACTGCCATGGTTCCATGATGGTTGAAGCTTTTGCAGCCAGAGATACACTCAAAGTACCACACACTTCCGTTGGTGGAGGTCATGTCAAGACCGCGAGTTTCAAGTTCAAGGCGGTTGAGGCAAGAACTAGAATTACTTTCTTCAGTGGTTTTTACCATACCAAGAAGACTGATACTGTATCTTTATGTGGTCCTGTCATTGACGAGATTGTGGTTTCTCATGTCGCTTAGATTAAGTTTACTCTTTATGACAACTGCACTTGTGTTCTTAGACTGGTCATGGACTTGGTGCCTTGCTTTGTATGTCTTGGCTCCTTTTGGAATTGAGTTATTGTCATCAAGTTAAAATGAATGATATATTATTGTAATATGAAATGTTTTGAGTTAAACGAATACCAAGAAGTATAATCTAGGACATTCCAAAAAGTGCAAGGAAATTAATACCTATAAAGTA
CDS Sequence
- >AT3G08030.1
ATGGCGGTTCCCAAAGCCATTATTCTACCTATCTTGCTACTCATCTGTGGTGCTGCTCTCGGAGCTCCTGCTTCTGAAGGTTATCTTCGTAATGGAAACTTCGAAGAGTCACCAAAGAAAACCGACATGAAGAAAACAGTTCTACTAGGCAAAAACGCCTTGCCCGAATGGGAAACCACCGGTTTCGTCGAGTACATCGCCGGCGGTCCTCAGCCAGGAGGCATGTACTTCCCAGTGGCTCATGGAGTCCACGCCGTGAGGCTCGGAAACGAAGCTACAATCTCTCAGAAGTTAGAAGTGAAGCCAGGTTCTCTCTACGCACTCACGTTTGGTGCGTCGAGAACTTGTGCACAAGACGAAGTTCTTAGAGTCTCTGTACCTTCTCAGTCCGGTGACTTGCCACTTCAAACACTTTACAACAGTTTCGGAGGTGACGTGTACGCTTGGGCCTTCGTCGCCAAGACTTCTCAAGTTACTGTGACTTTCCACAATCCTGGAGTTCAAGAAGATCCTGCTTGTGGTCCTTTGTTGGACGCTGTCGCCATTAAAGAGCTTGTTCATCCAATCTACACCAGAGGGAACTTGGTGAAGAATGGAGGGTTCGAAGAAGGTCCTCACCGTCTAGTGAACTCCACACAAGGAGTCCTACTCCCACCTAAACAAGAAGATCTCACATCACCTTTACCTGGTTGGATCATAGAGTCACTCAAGGCAGTGAAATTCATAGACTCTAAGTACTTTAATGTCCCCTTTGGACATGCTGCGATCGAGCTAGTTGCAGGCAAAGAAAGTGCCATTGCACAAGTCATTAGAACCTCTCCTGGTCAAACTTACACCCTCTCCTTCGTCGTTGGAGATGCTAAGAATGACTGCCATGGTTCCATGATGGTTGAAGCTTTTGCAGCCAGAGATACACTCAAAGTACCACACACTTCCGTTGGTGGAGGTCATGTCAAGACCGCGAGTTTCAAGTTCAAGGCGGTTGAGGCAAGAACTAGAATTACTTTCTTCAGTGGTTTTTACCATACCAAGAAGACTGATACTGTATCTTTATGTGGTCCTGTCATTGACGAGATTGTGGTTTCTCATGTCGCTTAG - >AT3G08030.2
ATGGCGGTTCCCAAAGCCATTATTCTACCTATCTTGCTACTCATCTGTGGTGCTGCTCTCGGAGCTCCTGCTTCTGAAGGTTATCTTCGTAATGGAAACTTCGAAGAGTCACCAAAGAAAACCGACATGAAGAAAACAGTTCTACTAGGCAAAAACGCCTTGCCCGAATGGGAAACCACCGGTTTCGTCGAGTACATCGCCGGCGGTCCTCAGCCAGGAGGCATGTACTTCCCAGTGGCTCATGGAGTCCACGCCGTGAGGCTCGGAAACGAAGCTACAATCTCTCAGAAGTTAGAAGTGAAGCCAGGTTCTCTCTACGCACTCACGTTTGGTGCGTCGAGAACTTGTGCACAAGACGAAGTTCTTAGAGTCTCTGTACCTTCTCAGTCCGGTGACTTGCCACTTCAAACACTTTACAACAGTTTCGGAGGTGACGTGTACGCTTGGGCCTTCGTCGCCAAGACTTCTCAAGTTACTGTGACTTTCCACAATCCTGGAGTTCAAGAAGATCCTGCTTGTGGTCCTTTGTTGGACGCTGTCGCCATTAAAGAGCTTGTTCATCCAATCTACACCAGAGGGAACTTGGTGAAGAATGGAGGGTTCGAAGAAGGTCCTCACCGTCTAGTGAACTCCACACAAGGAGTCCTACTCCCACCTAAACAAGAAGATCTCACATCACCTTTACCTGGTTGGATCATAGAGTCACTCAAGGCAGTGAAATTCATAGACTCTAAGTACTTTAATGTCCCCTTTGGACATGCTGCGATCGAGCTAGTTGCAGGCAAAGAAAGTGCCATTGCACAAGTCATTAGAACCTCTCCTGGTCAAACTTACACCCTCTCCTTCGTCGTTGGAGATGCTAAGAATGACTGCCATGGTTCCATGATGGTTGAAGCTTTTGCAGCCAGAGATACACTCAAAGTACCACACACTTCCGTTGGTGGAGGTCATGTCAAGACCGCGAGTTTCAAGTTCAAGGCGGTTGAGGCAAGAACTAGAATTACTTTCTTCAGTGGTTTTTACCATACCAAGAAGACTGATACTGTATCTTTATGTGGTCCTGTCATTGACGAGATTGTGGTTTCTCATGTCGCTTAG
Protein Sequence
- >AT3G08030.1
MAVPKAIILPILLLICGAALGAPASEGYLRNGNFEESPKKTDMKKTVLLGKNALPEWETTGFVEYIAGGPQPGGMYFPVAHGVHAVRLGNEATISQKLEVKPGSLYALTFGASRTCAQDEVLRVSVPSQSGDLPLQTLYNSFGGDVYAWAFVAKTSQVTVTFHNPGVQEDPACGPLLDAVAIKELVHPIYTRGNLVKNGGFEEGPHRLVNSTQGVLLPPKQEDLTSPLPGWIIESLKAVKFIDSKYFNVPFGHAAIELVAGKESAIAQVIRTSPGQTYTLSFVVGDAKNDCHGSMMVEAFAARDTLKVPHTSVGGGHVKTASFKFKAVEARTRITFFSGFYHTKKTDTVSLCGPVIDEIVVSHVA - >AT3G08030.2
MAVPKAIILPILLLICGAALGAPASEGYLRNGNFEESPKKTDMKKTVLLGKNALPEWETTGFVEYIAGGPQPGGMYFPVAHGVHAVRLGNEATISQKLEVKPGSLYALTFGASRTCAQDEVLRVSVPSQSGDLPLQTLYNSFGGDVYAWAFVAKTSQVTVTFHNPGVQEDPACGPLLDAVAIKELVHPIYTRGNLVKNGGFEEGPHRLVNSTQGVLLPPKQEDLTSPLPGWIIESLKAVKFIDSKYFNVPFGHAAIELVAGKESAIAQVIRTSPGQTYTLSFVVGDAKNDCHGSMMVEAFAARDTLKVPHTSVGGGHVKTASFKFKAVEARTRITFFSGFYHTKKTDTVSLCGPVIDEIVVSHVA