Gene Details:
- Gene ID: AT3G07970
- Gene Symbol: QRT2
- Gene Name: QUARTET 2
- Description: Pectin lyase-like superfamily protein;(source:Araport11)
- TAIR Accession: locus:2077407
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000146 — abscission zone — zona de absición (Spanish, exact), 離層 (Japanese, exact), abscission layer (related)
Gene Ontology:
- GO:0048235 — acts upstream of or within — pollen sperm cell differentiation
- GO:0010047 — involved in — fruit dehiscence
- GO:0045490 — acts upstream of or within — pectin catabolic process
- GO:0045490 — involved in — pectin catabolic process
- GO:0009901 — involved in — anther dehiscence
- GO:0005576 — located in — extracellular region
- GO:0009830 — acts upstream of or within — cell wall modification involved in abscission
- GO:0009901 — acts upstream of or within — anther dehiscence
- GO:0010047 — acts upstream of or within — fruit dehiscence
- GO:0004650 — enables — polygalacturonase activity
Germplasm Phenotype:
- AT3 — Reduced seed set. Indehiscent anthers.
- CS8051 — outer walls of the four meiotic products of a pollen mother cell are fused and the pollen grains fail to separate, forming pollen tetrads; pollen viable and fertile, and fertilization with a single tetrad usually yields four seeds.
Function-related keywords:
Literature:
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- Patterns of expansion and expression divergence in the plant polygalacturonase gene family. DOI: 10.1186/gb-2006-7-9-r87 ; PMID: 17010199
- Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2. DOI: 10.1104/pp.107.110908 ; PMID: 18192438
- ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE1 (ADPG1), ADPG2, and QUARTET2 are Polygalacturonases required for cell separation during reproductive development in Arabidopsis. DOI: 10.1105/tpc.108.063768 ; PMID: 19168715
- A survey of dominant mutations in Arabidopsis thaliana. DOI: 10.1016/j.tplants.2012.08.006 ; PMID: 22995285
- The pectin lyases in Arabidopsis thaliana: evolution, selection and expression profiles. DOI: 10.1371/journal.pone.0046944 ; PMID: 23056537
- Defects in Peroxisomal 6-Phosphogluconate Dehydrogenase Isoform PGD2 Prevent Gametophytic Interaction in Arabidopsis thaliana. DOI: 10.1104/pp.15.01301 ; PMID: 26941195
- Polygalacturonase45 cleaves pectin and links cell proliferation and morphogenesis to leaf curvature in Arabidopsis thaliana. DOI: 10.1111/tpj.15308 ; PMID: 33960548
- MicroRNA775 regulates intrinsic leaf size and reduces cell wall pectin levels by targeting a galactosyltransferase gene in Arabidopsis. DOI: 10.1093/plcell/koaa049 ; PMID: 33955485
- Knock-down of gene expression throughout meiosis and pollen formation by virus-induced gene silencing in Arabidopsis thaliana. DOI: 10.1111/tpj.15733 ; PMID: 35340073
- ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE1 (ADPG1), ADPG2, and QUARTET2 are Polygalacturonases required for cell separation during reproductive development in Arabidopsis. DOI: 10.1105/tpc.108.063768 ; PMID: 19168715
Sequences:
cDNA Sequence
- >AT3G07970.1
ACATCATTCACTCATCTCTTTCCTCATCATTCTTTCTACGTCAAACCCAACCTTAATCTAACTTTGAGAGAAGTCCCACTCCAACAAAAAAAAATGTATGAAAAGATCATAATCTTATCAGTATTTCTCTTAACATTTCTTCCTTCTTGTTTCAGCAGCTACCCATTTAATCATAGAGATGATCTTTTCATGTCTTCTAATGTTTATTATGAAACCAATCGACAACATCAACATGGTCACAATACACGCAACAGTCACTTGAAAAATCGCCATGGTTATGCTCCTAGATCTTCTCCTCGATCTTTTAACGTCAACACTTTCGGTGCTAAAGCCAACGGGAACGACGATTCTAAGGCCTTCATGAAAGCTTGGGAAGCAGCTTGTTCGTCAACCGGAATAGTTTACATTGTGGCTCCAAAGAATAGAGATTACATGCTTAAAGCGGTTACGTTCTCTGGTCCATGTAAATCATCCTTGATTATTTTTAAGATTTACGGAAGGATTGAGGCATGGGAAAATCCATCAGACTACAAGGAACGTAGGCATTGGATTGTGTTCGAAAATGTCAATAACCTTCGAGTTGAAGGAGGTGGGCGCATCGACGGTAATGGACATATTTGGTGGCCAAAATCTTGCAAAATCAACCCTCAACTTCCTTGCCTGGGAGCTCCAACGGCGGTTACGTTTGTGGAGTGTAATAACTTGAGAGTAAGTAACATTAGGTTGGAAAACGCACAGCAAATGCATTTGACGTTTCAAGACTGCAAAAACGTGAAGGCTTTGAATCTTATGGTCACATCTCCGGCTGATAGTCCTAACACTGATGGCATTCACGTTTCCGGAACTCAGAATATCTTAATTCAAGACTCTATCGTCCGTACTGGTGATGATTGTATATCGATAGTGAGTGGGTCGGAGAATGTGAGAGCGACAGGCATTACATGCGGGCCTGGTCATGGAATCAGTATTGGAAGTTTGGGAGAAGATAACTCAGAAGCATATGTTTCAAATGTGGTAGTCAACAAAGCGACTCTTATAGGAACCACTAATGGTGTGAGAATCAAGACTTGGCAGGGAGGACATGGAATGGCAAAGAACATCATATTCCAAGACATCATAATGAAAAACGTTACAAACCCAATAATCATCAACCAGGACTACTGCGATCGTGTTGAAGCATGCCCCGAACAGAAATCCGCGGTACAAGTGAGCAATGTGTTGTACAAAAACATACAAGGGACGAGCTCAAGACCCATAGCTGTGAAATTTGTATGCAGCAAGAACATTCCATGTCGAGGAATATCAATGCAAAACGTTAAACTGGTCGATCAAACTCAACAAGATGTATCCAAAGCTTCTTGCTCCAATGTGAAGTTGGACACCCGAGGAAATGTTTCTCCTCTTTGCACTTGATCACTTTTGATCCCCAAGAAAAAAAAACAGTATTCACCGATCGATTTTAGTCTATTTCTATATGTTTTCGTTATTTGGTCGTGATTTCTGTATATATAGAATATCAATATAGTCCATGTTTGAAGTGTAGGTTTTTATGGAGATTATTCGATATACGAAATGGGATTGTAAGGTTATAATTAGGGTATTGATCTTGGTTAGATGTAAAACAAAATTTACTAATATTCTGTCTCAGCTTATCAT
CDS Sequence
- >AT3G07970.1
ATGTATGAAAAGATCATAATCTTATCAGTATTTCTCTTAACATTTCTTCCTTCTTGTTTCAGCAGCTACCCATTTAATCATAGAGATGATCTTTTCATGTCTTCTAATGTTTATTATGAAACCAATCGACAACATCAACATGGTCACAATACACGCAACAGTCACTTGAAAAATCGCCATGGTTATGCTCCTAGATCTTCTCCTCGATCTTTTAACGTCAACACTTTCGGTGCTAAAGCCAACGGGAACGACGATTCTAAGGCCTTCATGAAAGCTTGGGAAGCAGCTTGTTCGTCAACCGGAATAGTTTACATTGTGGCTCCAAAGAATAGAGATTACATGCTTAAAGCGGTTACGTTCTCTGGTCCATGTAAATCATCCTTGATTATTTTTAAGATTTACGGAAGGATTGAGGCATGGGAAAATCCATCAGACTACAAGGAACGTAGGCATTGGATTGTGTTCGAAAATGTCAATAACCTTCGAGTTGAAGGAGGTGGGCGCATCGACGGTAATGGACATATTTGGTGGCCAAAATCTTGCAAAATCAACCCTCAACTTCCTTGCCTGGGAGCTCCAACGGCGGTTACGTTTGTGGAGTGTAATAACTTGAGAGTAAGTAACATTAGGTTGGAAAACGCACAGCAAATGCATTTGACGTTTCAAGACTGCAAAAACGTGAAGGCTTTGAATCTTATGGTCACATCTCCGGCTGATAGTCCTAACACTGATGGCATTCACGTTTCCGGAACTCAGAATATCTTAATTCAAGACTCTATCGTCCGTACTGGTGATGATTGTATATCGATAGTGAGTGGGTCGGAGAATGTGAGAGCGACAGGCATTACATGCGGGCCTGGTCATGGAATCAGTATTGGAAGTTTGGGAGAAGATAACTCAGAAGCATATGTTTCAAATGTGGTAGTCAACAAAGCGACTCTTATAGGAACCACTAATGGTGTGAGAATCAAGACTTGGCAGGGAGGACATGGAATGGCAAAGAACATCATATTCCAAGACATCATAATGAAAAACGTTACAAACCCAATAATCATCAACCAGGACTACTGCGATCGTGTTGAAGCATGCCCCGAACAGAAATCCGCGGTACAAGTGAGCAATGTGTTGTACAAAAACATACAAGGGACGAGCTCAAGACCCATAGCTGTGAAATTTGTATGCAGCAAGAACATTCCATGTCGAGGAATATCAATGCAAAACGTTAAACTGGTCGATCAAACTCAACAAGATGTATCCAAAGCTTCTTGCTCCAATGTGAAGTTGGACACCCGAGGAAATGTTTCTCCTCTTTGCACTTGA
Protein Sequence
- >AT3G07970.1
MYEKIIILSVFLLTFLPSCFSSYPFNHRDDLFMSSNVYYETNRQHQHGHNTRNSHLKNRHGYAPRSSPRSFNVNTFGAKANGNDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPCKSSLIIFKIYGRIEAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSCKINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVKLDTRGNVSPLCT