Information report for AT3G07830
Gene Details
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Functional Descriptions
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005975 — involved in — carbohydrate metabolic process
- GO:0005576 — located in — extracellular region
- GO:0004650 — enables — polygalacturonase activity
Functional Keywords
Literature and News
- Patterns of expansion and expression divergence in the plant polygalacturonase gene family. DOI: 10.1186/gb-2006-7-9-r87 ; PMID: 17010199
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The pectin lyases in Arabidopsis thaliana: evolution, selection and expression profiles. DOI: 10.1371/journal.pone.0046944 ; PMID: 23056537
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
Gene Resources
- UniProt: Q9SFD1
- EMBL: AC013483, CP002686
- AlphaFoldDB: Q9SFD1
- EnsemblPlants: AT3G07830.1
- Gramene: AT3G07830.1
- KEGG: ath:AT3G07830
- Orthologous matrix: NITFRGW
- ExpressionAtlas: AT3G07830
Homologs
- Brassica napus GSBRNA2T00078063001, GSBRNA2T00139307001
- Brassica oleracea Bo8g094600, Bol042823
- Brassica rapa Brara.F03263
- Cicer arietinum Ca_01031
- Fragaria vesca mrna04504.1-v1.0-hybrid
- Malus domestica Md-PG1
- Oryza sativa OsPG2, PSL1;OsPG1
- Pyrus bretschneideri Pbr023394.1
- Raphanus raphanistrum RrC4101_p1
- Saccharum spontaneum Sspon.03G0015710-3C
- Vitis vinifera VIT_212s0028g01270
Sequences
cDNA Sequence
- >AT3G07830.1
TTAGAAAACAAACAAAAAAAAAAAAACAAAAAAAAAAACATAAGAAAAAAATTAAAATAAAATAAAATAATGGGTTCATATTTTGGAATTTCTACAATTTTCGTGATATGTTTGCTGGGATTTTCAGCCAATGCTCATGAGGTGCTTAGACTTACGTCTTCTCCAGGTTCTGATATTACGCAGGCGCTTCTGAGAGCATTCACAACGGCATGCCAATCTCCGACACCGAGGAAGGTGGTGATCCCAAAAGGACAGTTCAAGCTTGGTGAGATCATGATGTCGGGTCCATGCAAATCTCCAGTCGAGATCACCTTGCTAGGCACTGTCCTCGCTGACGGAAACTCGATCCATGGAAAAGAAAAATGGGTCGTGTTCCAAAGAATGGATGGGTTCAGGTTGAACGGAGGTGGAACTTTCGACGGTGAAGGTAACGCAGCTTGGAGGGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCCATCAGTATAAGGTTTGATTTCGTGACGAACGCTGAGATCAGAGACATATCCTCAATCGATGCCAAGAACTTTCACATCAACGTGATTGGCGCCAAGAACATGACCTTTGACAACGTCAAGATCATGGCTCCAGCAGAGAGCCCCAACACTGACGGGATCCACTTGGGAAGAAGTGTCGGGGTCTCCATTATCAACTCTAGGATCTCCACCGGAGATGACTGTGTCTCTGTCGGGGACGGGATGGTGAATCTTCTAGTTAAGAACGTCGTGTGTGGTCCTGGACACGGGATCAGTGTTGGAAGCCTTGGAAGGTACGGACATGAACAGGACGTCAGCGGCATTAGGGTCATCAATTGCACCCTCCAGGAGACTGACAATGGCCTCAGGATCAAGACTTGGCCCTCTGCAGCTTGCTCCACCACTGCCTCCAATATTCATTTTGAGAATATCATCCTTAGAAACGTTAGTAACCCAATCCTCATCGACCAAGAGTACTGTCCTTGGAACCAGTGCAACAAGCAGAAATCATCATCCATTAAGCTGGCAAACATAAGCTTCAGGAGGATTAGAGGGACATCAGGGAACAAAGACGCAGTGAAGCTATTGTGCAGCAAGGGATATCCGTGTGAGAACGTTCAGGTTGGAGACATTAATATTCAGTACACTGGAGCCGATGGTCCAGCCACCTTCATGTGCTCAAACGTAAGGCCTAAGCTAGTTGGAACTCAGTTCCCAAAGGCTTGTAACACACCACCCGTGCTGACCCAACCTAAGTAAAATGTAGAAAGTTCTCATAACATTTAGGAATTTCTCATCCATTTTTTCTTCAATCTTAGTTTTTCCCAATGTCACACAAGGGAGATTTCTTTTATTTAAAAACTGTAAAAGAATTTTGTTTCACTTTTTATTTGTTTGATGCCAACACAAATACATAGATGTGTGTGCGCATATATGAATGCAATAAAACTAAAAAGATGCAGGTTATTTTATTTTATTTGTATTTTAATATCGTTTGTTATCAAAATCCTTTTTTTTTC
CDS Sequence
- >AT3G07830.1
ATGGGTTCATATTTTGGAATTTCTACAATTTTCGTGATATGTTTGCTGGGATTTTCAGCCAATGCTCATGAGGTGCTTAGACTTACGTCTTCTCCAGGTTCTGATATTACGCAGGCGCTTCTGAGAGCATTCACAACGGCATGCCAATCTCCGACACCGAGGAAGGTGGTGATCCCAAAAGGACAGTTCAAGCTTGGTGAGATCATGATGTCGGGTCCATGCAAATCTCCAGTCGAGATCACCTTGCTAGGCACTGTCCTCGCTGACGGAAACTCGATCCATGGAAAAGAAAAATGGGTCGTGTTCCAAAGAATGGATGGGTTCAGGTTGAACGGAGGTGGAACTTTCGACGGTGAAGGTAACGCAGCTTGGAGGGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCCATCAGTATAAGGTTTGATTTCGTGACGAACGCTGAGATCAGAGACATATCCTCAATCGATGCCAAGAACTTTCACATCAACGTGATTGGCGCCAAGAACATGACCTTTGACAACGTCAAGATCATGGCTCCAGCAGAGAGCCCCAACACTGACGGGATCCACTTGGGAAGAAGTGTCGGGGTCTCCATTATCAACTCTAGGATCTCCACCGGAGATGACTGTGTCTCTGTCGGGGACGGGATGGTGAATCTTCTAGTTAAGAACGTCGTGTGTGGTCCTGGACACGGGATCAGTGTTGGAAGCCTTGGAAGGTACGGACATGAACAGGACGTCAGCGGCATTAGGGTCATCAATTGCACCCTCCAGGAGACTGACAATGGCCTCAGGATCAAGACTTGGCCCTCTGCAGCTTGCTCCACCACTGCCTCCAATATTCATTTTGAGAATATCATCCTTAGAAACGTTAGTAACCCAATCCTCATCGACCAAGAGTACTGTCCTTGGAACCAGTGCAACAAGCAGAAATCATCATCCATTAAGCTGGCAAACATAAGCTTCAGGAGGATTAGAGGGACATCAGGGAACAAAGACGCAGTGAAGCTATTGTGCAGCAAGGGATATCCGTGTGAGAACGTTCAGGTTGGAGACATTAATATTCAGTACACTGGAGCCGATGGTCCAGCCACCTTCATGTGCTCAAACGTAAGGCCTAAGCTAGTTGGAACTCAGTTCCCAAAGGCTTGTAACACACCACCCGTGCTGACCCAACCTAAGTAA
Protein Sequence
- >AT3G07830.1
MGSYFGISTIFVICLLGFSANAHEVLRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQFPKACNTPPVLTQPK