Gene Details:
- Gene ID: AT3G07830
- Gene Symbol: PGA3
- Gene Name: polygalacturonase 3
- Description: Pectin lyase-like superfamily protein;(source:Araport11)
- TAIR Accession: locus:2077412
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005975 — involved in — carbohydrate metabolic process
- GO:0005576 — located in — extracellular region
- GO:0004650 — enables — polygalacturonase activity
Function-related keywords:
Literature:
- Patterns of expansion and expression divergence in the plant polygalacturonase gene family. DOI: 10.1186/gb-2006-7-9-r87 ; PMID: 17010199
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The pectin lyases in Arabidopsis thaliana: evolution, selection and expression profiles. DOI: 10.1371/journal.pone.0046944 ; PMID: 23056537
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
Sequences:
cDNA Sequence
- >AT3G07830.1
TTAGAAAACAAACAAAAAAAAAAAAACAAAAAAAAAAACATAAGAAAAAAATTAAAATAAAATAAAATAATGGGTTCATATTTTGGAATTTCTACAATTTTCGTGATATGTTTGCTGGGATTTTCAGCCAATGCTCATGAGGTGCTTAGACTTACGTCTTCTCCAGGTTCTGATATTACGCAGGCGCTTCTGAGAGCATTCACAACGGCATGCCAATCTCCGACACCGAGGAAGGTGGTGATCCCAAAAGGACAGTTCAAGCTTGGTGAGATCATGATGTCGGGTCCATGCAAATCTCCAGTCGAGATCACCTTGCTAGGCACTGTCCTCGCTGACGGAAACTCGATCCATGGAAAAGAAAAATGGGTCGTGTTCCAAAGAATGGATGGGTTCAGGTTGAACGGAGGTGGAACTTTCGACGGTGAAGGTAACGCAGCTTGGAGGGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCCATCAGTATAAGGTTTGATTTCGTGACGAACGCTGAGATCAGAGACATATCCTCAATCGATGCCAAGAACTTTCACATCAACGTGATTGGCGCCAAGAACATGACCTTTGACAACGTCAAGATCATGGCTCCAGCAGAGAGCCCCAACACTGACGGGATCCACTTGGGAAGAAGTGTCGGGGTCTCCATTATCAACTCTAGGATCTCCACCGGAGATGACTGTGTCTCTGTCGGGGACGGGATGGTGAATCTTCTAGTTAAGAACGTCGTGTGTGGTCCTGGACACGGGATCAGTGTTGGAAGCCTTGGAAGGTACGGACATGAACAGGACGTCAGCGGCATTAGGGTCATCAATTGCACCCTCCAGGAGACTGACAATGGCCTCAGGATCAAGACTTGGCCCTCTGCAGCTTGCTCCACCACTGCCTCCAATATTCATTTTGAGAATATCATCCTTAGAAACGTTAGTAACCCAATCCTCATCGACCAAGAGTACTGTCCTTGGAACCAGTGCAACAAGCAGAAATCATCATCCATTAAGCTGGCAAACATAAGCTTCAGGAGGATTAGAGGGACATCAGGGAACAAAGACGCAGTGAAGCTATTGTGCAGCAAGGGATATCCGTGTGAGAACGTTCAGGTTGGAGACATTAATATTCAGTACACTGGAGCCGATGGTCCAGCCACCTTCATGTGCTCAAACGTAAGGCCTAAGCTAGTTGGAACTCAGTTCCCAAAGGCTTGTAACACACCACCCGTGCTGACCCAACCTAAGTAAAATGTAGAAAGTTCTCATAACATTTAGGAATTTCTCATCCATTTTTTCTTCAATCTTAGTTTTTCCCAATGTCACACAAGGGAGATTTCTTTTATTTAAAAACTGTAAAAGAATTTTGTTTCACTTTTTATTTGTTTGATGCCAACACAAATACATAGATGTGTGTGCGCATATATGAATGCAATAAAACTAAAAAGATGCAGGTTATTTTATTTTATTTGTATTTTAATATCGTTTGTTATCAAAATCCTTTTTTTTTC
CDS Sequence
- >AT3G07830.1
ATGGGTTCATATTTTGGAATTTCTACAATTTTCGTGATATGTTTGCTGGGATTTTCAGCCAATGCTCATGAGGTGCTTAGACTTACGTCTTCTCCAGGTTCTGATATTACGCAGGCGCTTCTGAGAGCATTCACAACGGCATGCCAATCTCCGACACCGAGGAAGGTGGTGATCCCAAAAGGACAGTTCAAGCTTGGTGAGATCATGATGTCGGGTCCATGCAAATCTCCAGTCGAGATCACCTTGCTAGGCACTGTCCTCGCTGACGGAAACTCGATCCATGGAAAAGAAAAATGGGTCGTGTTCCAAAGAATGGATGGGTTCAGGTTGAACGGAGGTGGAACTTTCGACGGTGAAGGTAACGCAGCTTGGAGGGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCCATCAGTATAAGGTTTGATTTCGTGACGAACGCTGAGATCAGAGACATATCCTCAATCGATGCCAAGAACTTTCACATCAACGTGATTGGCGCCAAGAACATGACCTTTGACAACGTCAAGATCATGGCTCCAGCAGAGAGCCCCAACACTGACGGGATCCACTTGGGAAGAAGTGTCGGGGTCTCCATTATCAACTCTAGGATCTCCACCGGAGATGACTGTGTCTCTGTCGGGGACGGGATGGTGAATCTTCTAGTTAAGAACGTCGTGTGTGGTCCTGGACACGGGATCAGTGTTGGAAGCCTTGGAAGGTACGGACATGAACAGGACGTCAGCGGCATTAGGGTCATCAATTGCACCCTCCAGGAGACTGACAATGGCCTCAGGATCAAGACTTGGCCCTCTGCAGCTTGCTCCACCACTGCCTCCAATATTCATTTTGAGAATATCATCCTTAGAAACGTTAGTAACCCAATCCTCATCGACCAAGAGTACTGTCCTTGGAACCAGTGCAACAAGCAGAAATCATCATCCATTAAGCTGGCAAACATAAGCTTCAGGAGGATTAGAGGGACATCAGGGAACAAAGACGCAGTGAAGCTATTGTGCAGCAAGGGATATCCGTGTGAGAACGTTCAGGTTGGAGACATTAATATTCAGTACACTGGAGCCGATGGTCCAGCCACCTTCATGTGCTCAAACGTAAGGCCTAAGCTAGTTGGAACTCAGTTCCCAAAGGCTTGTAACACACCACCCGTGCTGACCCAACCTAAGTAA
Protein Sequence
- >AT3G07830.1
MGSYFGISTIFVICLLGFSANAHEVLRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQFPKACNTPPVLTQPK