Information report for AT3G07390
Gene Details
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Functional Descriptions
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0005886 — located in — plasma membrane
- GO:0010102 — acts upstream of or within — lateral root morphogenesis
- GO:0009733 — acts upstream of or within — response to auxin
- GO:0005201 — enables — extracellular matrix structural constituent
- GO:0016020 — located in — membrane
- GO:0005829 — located in — cytosol
- GO:0005576 — located in — extracellular region
- GO:0030198 — acts upstream of or within — extracellular matrix organization
Functional Keywords
Literature and News
- Isolation and characterization of cDNA clones corresponding with mRNAs that accumulate during auxin-induced lateral root formation. DOI: 10.1023/a:1006104205959 ; PMID: 10080694
- Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. DOI: 10.1104/pp.010884 ; PMID: 12068095
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- SETH1 and SETH2, two components of the glycosylphosphatidylinositol anchor biosynthetic pathway, are required for pollen germination and tube growth in Arabidopsis. DOI: 10.1105/tpc.014407 ; PMID: 14671020
- Development and evaluation of an Arabidopsis whole genome Affymetrix probe array. DOI: 10.1111/j.1365-313X.2004.02061.x ; PMID: 15086809
- Transcript profiling of early lateral root initiation. DOI: 10.1073/pnas.0308702101 ; PMID: 15051881
- Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications. DOI: 10.1101/gr.2544504 ; PMID: 15489341
- Regulation of genes associated with auxin, ethylene and ABA pathways by 2,4-dichlorophenoxyacetic acid in Arabidopsis. DOI: 10.1007/s10142-005-0012-1 ; PMID: 16317577
- Expression profiling of auxin-treated Arabidopsis roots: toward a molecular analysis of lateral root emergence. DOI: 10.1093/pcp/pcj043 ; PMID: 16621846
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis. DOI: 10.1104/pp.106.082289 ; PMID: 16920880
- Suppression by ABA of salicylic acid and lignin accumulation and the expression of multiple genes, in Arabidopsis infected with Pseudomonas syringae pv. tomato. DOI: 10.1007/s10142-006-0041-4 ; PMID: 17149585
- Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis. DOI: 10.1007/s00425-007-0530-2 ; PMID: 17497164
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Genome-wide identification of osmotic stress response gene in Arabidopsis thaliana. DOI: 10.1016/j.ygeno.2008.08.011 ; PMID: 18804526
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Identification and Characterization of Arabidopsis Seed Coat Mucilage Proteins. DOI: 10.1104/pp.16.01600 ; PMID: 28003327
- A prospective study of short-term apoplastic responses to ammonium treatment. DOI: 10.1016/j.jplph.2023.154008 ; PMID: 37245458
- Isolation and characterization of cDNA clones corresponding with mRNAs that accumulate during auxin-induced lateral root formation. DOI: 10.1023/a:1006104205959 ; PMID: 10080694
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VEI7
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178VEI7
- EnsemblPlants: AT3G07390.1
- Gramene: AT3G07390.1
- KEGG: ath:AT3G07390
Homologs
- Brassica oleracea Bol045562
- Musa acuminata Ma04_g17130
Sequences
cDNA Sequence
- >AT3G07390.1
ATTCACATCGTGAACGTGACTTTTCTATAGCTAGTGGTCAACTCGACACGTGGCATCATCTCAACGGTCTCCTTGATTCTCTCGTCATAGAAACGATGCACTGAATCAATCTCCATAACTTCAGGGCATTGCCCTTCTATATAAACATCACATGTCCCTGTGTCTTAAAATACCTCTTATCAAACACCAAACCACACCAGAACAGAACTCAGCCATGGCTTCTTCTTCTTCTTCTCTTCTAATCCTAGCCGTTGCTTGTTTCGTCTCGCTAATCTCACCGGCGATTTCACAACAGGCTTGCAAATCACAGAACTTGAACTCCGCCGGTCCGTTCGATAGTTGCGAAGACCTTCCGGTACTCAATTCCTACCTCCATTACACCTACAATTCCTCAAATTCATCTCTCTCCGTCGCTTTCGTCGCCACTCCATCTCAAGCCAACGGTGGCTGGGTCGCTTGGGCTATTAACCCTACGGGGACTAAGATGGCTGGTTCTCAAGCCTTCCTCGCTTACAGATCCGGCGGTGGTGCGGCTCCGGTCGTGAAGACGTACAACATTAGCAGCTACAGCAGTCTCGTCGAAGGTAAACTTGCTTTTGATTTTTGGAATCTACGCGCCGAGTCGTTAAGCGGCGGTAGGATCGCCATTTTCACGACGGTTAAGGTTCCGGCGGGAGCTGATAGTGTGAATCAGGTATGGCAGATCGGCGGCAATGTTACCAACGGTCGTCCCGGTGTACATCCTTTCGGTCCTGATAATTTGGGCTCCCACCGTGTGTTGAGTTTCACAGAAGATGCAGCACCGGGCTCTGCTCCTTCGCCGGGATCTGCTCCGGCGCCGGGCACCAGTGGCTCGACTACCCCAGGAACAGCGGCGGGAGGTCCAGGGAACGCGGGGTCATTGACGAGGAACGTAAATTTTGGGGTCAATTTGGGAATTTTGGTTTTGTTGGGTTCTATTTTTATTTTCTGAATGGGGATCTCTCTCTAGTCTCTCTTCTCTTCTTGAGTCTCTCTCTATTTTTTTTTTTTTTTGGTTTGTTCGAACAATAATGGTGCCCCATACTTTTGTACTGTTTTAGTCTTAGGGCCATTTACTTTGTTTCACCACATTACTTAGAGTTATTGGATTGTATGGACCATTACTATCATGAGATTGAGATCATCTTATCTTCTTAAAATATCTATTTGCCATC - >AT3G07390.2
ATTCACATCGTGAACGTGACTTTTCTATAGCTAGTGGTCAACTCGACACGTGGCATCATCTCAACGGTCTCCTTGATTCTCTCGTCATAGAAACGATGCACTGAATCAATCTCCATAACTTCAGGGCATTGCCCTTCTATATAAACATCACATGTCCCTGTGTCTTAAAATACCTCTTATCAAACACCAAACCACACCAGAACAGAACTCAGCCATGGCTTCTTCTTCTTCTTCTCTTCTAATCCTAGCCGTTGCTTGTTTCGTCTCGCTAATCTCACCGGCGATTTCACAACAGGCTTGCAAATCACAGAACTTGAACTCCGCCGGTCCGTTCGATAGTTGCGAAGACCTTCCGGTACTCAATTCCTACCTCCATTACACCTACAATTCCTCAAATTCATCTCTCTCCGTCGCTTTCGTCGCCACTCCATCTCAAGCCAACGGTGGCTGGGTCGCTTGGGCTATTAACCCTACGGGGACTAAGATGGCTGGTTCTCAAGCCTTCCTCGCTTACAGATCCGGCGGTGGTGCGGCTCCGGTCGTGAAGACGTACAACATTAGCAGCTACAGCAGTCTCGTCGAAGGTAAACTTGCTTTTGATTTTTGGAATCTACGCGCCGAGTCGTTAAGCGGCGGTAGGATCGCCATTTTCACGACGGTTAAGGTTCCGGCGGGAGCTGATAGTGTGAATCAGGTATGGCAGATCGGCGGCAATGTTACCAACGGTCGTCCCGGTGTACATCCTTTCGGTCCTGATAATTTGGGCTCCCACCGTGTGTTGAGTTTCACAGAAGATGCAGCACCGGGCTCTGCTCCTTCGCCGGGATCTGCTCCGGCGCCGGGCACCAGTGGCTCGACTACCCCAGGAACAGCGGCGGGAGGTCCAGGGAACGCGGGGTCATTGACGAGGAACGTAAATTTTGGGGTCAATTTGGGAATTTTGGTTTTGTTGGGTTCTATTTTTATTTTCTGAATGGGGATCTCTCTCTAGTCTCTCTTCTCTTCTTGAGTCTCTCTCTATTTTTTTTTTTTTTTGGTTTGTTCGAACAATAATGGTGCCCCATACTTTTGTACTGTTTTAGTCTTAGGGCCATTTACTTTGTTTCACCACATTACTTAGAGTTATTGGATTGTATGGACCATTACTATCATGAGATTGAGATCATCTTATCTTCTTAAAATATCTATTTGCCATC
CDS Sequence
- >AT3G07390.1
ATGTCCCTGTGTCTTAAAATACCTCTTATCAAACACCAAACCACACCAGAACAGAACTCAGCCATGGCTTCTTCTTCTTCTTCTCTTCTAATCCTAGCCGTTGCTTGTTTCGTCTCGCTAATCTCACCGGCGATTTCACAACAGGCTTGCAAATCACAGAACTTGAACTCCGCCGGTCCGTTCGATAGTTGCGAAGACCTTCCGGTACTCAATTCCTACCTCCATTACACCTACAATTCCTCAAATTCATCTCTCTCCGTCGCTTTCGTCGCCACTCCATCTCAAGCCAACGGTGGCTGGGTCGCTTGGGCTATTAACCCTACGGGGACTAAGATGGCTGGTTCTCAAGCCTTCCTCGCTTACAGATCCGGCGGTGGTGCGGCTCCGGTCGTGAAGACGTACAACATTAGCAGCTACAGCAGTCTCGTCGAAGGTAAACTTGCTTTTGATTTTTGGAATCTACGCGCCGAGTCGTTAAGCGGCGGTAGGATCGCCATTTTCACGACGGTTAAGGTTCCGGCGGGAGCTGATAGTGTGAATCAGGTATGGCAGATCGGCGGCAATGTTACCAACGGTCGTCCCGGTGTACATCCTTTCGGTCCTGATAATTTGGGCTCCCACCGTGTGTTGAGTTTCACAGAAGATGCAGCACCGGGCTCTGCTCCTTCGCCGGGATCTGCTCCGGCGCCGGGCACCAGTGGCTCGACTACCCCAGGAACAGCGGCGGGAGGTCCAGGGAACGCGGGGTCATTGACGAGGAACGTAAATTTTGGGGTCAATTTGGGAATTTTGGTTTTGTTGGGTTCTATTTTTATTTTCTGA - >AT3G07390.2
ATGTCCCTGTGTCTTAAAATACCTCTTATCAAACACCAAACCACACCAGAACAGAACTCAGCCATGGCTTCTTCTTCTTCTTCTCTTCTAATCCTAGCCGTTGCTTGTTTCGTCTCGCTAATCTCACCGGCGATTTCACAACAGGCTTGCAAATCACAGAACTTGAACTCCGCCGGTCCGTTCGATAGTTGCGAAGACCTTCCGGTACTCAATTCCTACCTCCATTACACCTACAATTCCTCAAATTCATCTCTCTCCGTCGCTTTCGTCGCCACTCCATCTCAAGCCAACGGTGGCTGGGTCGCTTGGGCTATTAACCCTACGGGGACTAAGATGGCTGGTTCTCAAGCCTTCCTCGCTTACAGATCCGGCGGTGGTGCGGCTCCGGTCGTGAAGACGTACAACATTAGCAGCTACAGCAGTCTCGTCGAAGGTAAACTTGCTTTTGATTTTTGGAATCTACGCGCCGAGTCGTTAAGCGGCGGTAGGATCGCCATTTTCACGACGGTTAAGGTTCCGGCGGGAGCTGATAGTGTGAATCAGGTATGGCAGATCGGCGGCAATGTTACCAACGGTCGTCCCGGTGTACATCCTTTCGGTCCTGATAATTTGGGCTCCCACCGTGTGTTGAGTTTCACAGAAGATGCAGCACCGGGCTCTGCTCCTTCGCCGGGATCTGCTCCGGCGCCGGGCACCAGTGGCTCGACTACCCCAGGAACAGCGGCGGGAGGTCCAGGGAACGCGGGGTCATTGACGAGGAACGTAAATTTTGGGGTCAATTTGGGAATTTTGGTTTTGTTGGGTTCTATTTTTATTTTCTGA
Protein Sequence
- >AT3G07390.1
MSLCLKIPLIKHQTTPEQNSAMASSSSSLLILAVACFVSLISPAISQQACKSQNLNSAGPFDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAINPTGTKMAGSQAFLAYRSGGGAAPVVKTYNISSYSSLVEGKLAFDFWNLRAESLSGGRIAIFTTVKVPAGADSVNQVWQIGGNVTNGRPGVHPFGPDNLGSHRVLSFTEDAAPGSAPSPGSAPAPGTSGSTTPGTAAGGPGNAGSLTRNVNFGVNLGILVLLGSIFIF - >AT3G07390.2
MSLCLKIPLIKHQTTPEQNSAMASSSSSLLILAVACFVSLISPAISQQACKSQNLNSAGPFDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAINPTGTKMAGSQAFLAYRSGGGAAPVVKTYNISSYSSLVEGKLAFDFWNLRAESLSGGRIAIFTTVKVPAGADSVNQVWQIGGNVTNGRPGVHPFGPDNLGSHRVLSFTEDAAPGSAPSPGSAPAPGTSGSTTPGTAAGGPGNAGSLTRNVNFGVNLGILVLLGSIFIF