Information report for AT3G07340
Gene Details
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Functional Descriptions
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0046983 — enables — protein dimerization activity
- GO:0005634 — is active in — nucleus
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- The Arabidopsis basic/helix-loop-helix transcription factor family. DOI: 10.1105/tpc.013839 ; PMID: 12897250
- Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana. DOI: 10.1105/tpc.151140 ; PMID: 14600211
- A global survey of gene regulation during cold acclimation in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.0010026 ; PMID: 16121258
- Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. DOI: 10.1016/j.diff.2010.02.003 ; PMID: 20219281
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Multiple bHLH proteins form heterodimers to mediate CRY2-dependent regulation of flowering-time in Arabidopsis. DOI: 10.1371/journal.pgen.1003861 ; PMID: 24130508
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Arabidopsis CIB3 regulates photoperiodic flowering in an FKF1-dependent way. DOI: 10.1093/bbb/zbaa120 ; PMID: 33686404
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
Gene Resources
- UniProt: A0A654F6M8
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654F6M8
- EnsemblPlants: AT3G07340.1
- Gramene: AT3G07340.1
- KEGG: ath:AT3G07340
- Orthologous matrix: IHMGFAQ
- ExpressionAtlas: AT3G07340
- InterPro: IPR011598, IPR024097, IPR036638
- PANTHER: PTHR12565, PTHR12565:SF444
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- SWISS-MODEL: A0A654F6M8
- Conserved Domain Database: cd18919
Homologs
- Brassica napus GSBRNA2T00039003001, GSBRNA2T00059474001, BnaA06G0363300ZS, BnaC07G0330000ZS
- Brassica oleracea XP_013638496.1, XP_013593917.1, XP_013593916.1, Bo7g089350
- Brassica rapa XP_009147085.1, XP_009151653.1, Bra037478
- Raphanus raphanistrum RrC10958_p1
Sequences
cDNA Sequence
- >AT3G07340.1
GAAGCTTGTTTCTCCAATTATCTCATTTGGTAAAGACGTTTCATTAGCGATATCGTGTTAACGTCGAAAGTCCTCCTCTCGTTACGGTCCGGTCCGACACAGAAATTTTTATTTAATATTTACTTTATTTTTTGTCCATTTATTAGAAAGAAAGTCATTGATTGGTGCAATTTATTAATATAAATTTATTAAACAACTATATAAACTCCTCATTACTGCCCATTAACGAGCTTCCCTTTTCCTCTGTTCTTCACTTTAAGAAAATTACAAACTTTTATCTTCTATTGGACGAATCTTTGATCTGGTTTTAATTAATCACACGCTTACTTTAGGATTTTTTTACCTGAATTCGAATATATACTTTTGATTTTCATCTTCCGTAGTCCGTACCGTAGAATTGAGGAGCTTCATGGAGAACGAGCTGTTTATGAATGCAGGAGTTTCGCATCCGCCGGTGATGACGTCACCGTCTTCTTCGTCGGCGATGCTTAAGTGGGTTTCAATGGAGACTCAGCCAGTGGATCCAAGTCTCAGTCGCAATCTGTTTTGGGAAAAGTCAACGGAACAGAGCATTTTTGATTCGGCTCTGAGCTCACTCGTCTCTTCTCCTACGCCGTCAAATTCAAACTTTTCGGTTGGCGGAGTAGGTGGAGAAAATGTCATTATGAGAGAGCTCATCGGGAAACTGGGTAATATCGGCGATATCTATGGAATTACGGCGAGCAATGGAAACTCGTGTTACGCAACTCCGATGAGCTCTCCACCGCCTGGAAGTATGATGGAGACGAAAACGACGACGCCGATGGCAGAACTGTCCGGCGACCCGGGATTCGCTGAGAGAGCGGCGAGGTTCTCGTGTTTTGGTAGCCGGAGTTTTAACAGCAGAACAAACTCGCCGTTTCCGATTAATAACGAACCACCCATCACAACCAATGAGAAAATGCCACGTGTATCAAGCAGCCCAGTTTTTAAGCCTCTTGCGTCTCATGTTCCCGCCGGCGAATCGTCCGGTGAACTTTCCCGGAAAAGAAAAACTAAATCCAAGCAGAATTCTCCTTCTGCAGTTTCATCATCAAAGGAGATTGAAGAGAAGGAAGATTCTGATCCAAAGAGATGCAAAAAATCAGAAGAAAATGGAGACAAAACTAAATCAATTGATCCTTACAAAGATTACATTCATGTTAGAGCTCGACGAGGCCAAGCCACCGATAGTCACAGTCTCGCCGAACGAGTTCGAAGAGAGAAAATAAGCGAAAGAATGAAGCTGCTTCAAGATCTTGTCCCTGGATGCAACAAGGTTACTGGAAAAGCACTGATGTTGGATGAAATTATAAACTATGTCCAATCATTGCAACGACAAGTTGAGTTCTTGTCGATGAAGTTATCGTCAGTGAACACCAGGCTGGACTTTAACATGGACGCTCTCTTGTCTAAGGATATATTTCCTTCAAGCAACAATCTAATGCATCATCAACAAGTACTTCAATTAGATTCTTCAGCAGAAACGTTATTGGGTGATCATCACAACAAAAATTTGCAATTGAACCCTGATATTTCTTCTAATAACGTAATAAACCCTTTGGAAACTTCTGAAACTAGAAGCTTCATTTCTCACTTACCAACACTTGCTCATTTCACTGACTCTATTTCTCAGTATTCAACATTTTCCGAAGATGATTTACATAGCATTATTCATATGGGTTTTGCGCAAAACCGTCTCCAAGAATTGAACCAAGGTTCATCAAACCAAGTACCATCGCACATGAAAGCTGAACTTTGATCAACCACTATATGCATTTTTACAAAAATATTGGCGTTTTAAAGGTCTCGAGGATAGAAAGTAAGAAAAGGATTGATGGGTGTACATAACAAGAAATTTGAATTGGACCACACCATATGCGAATTCATTTCTATAATCATCTTCATATACATAACTTCTTCTTTTTATCCTTCCGATTCATTTGTGGTGCTCAATTGTATTGTCATGTTGTTATCCGCTATTCTTCTTCTTATCAGATTCTTTAAACTTTTCTTGTTTGGATTTAATATCATTGTATGTTTTAACCCCACTATAAGTACTATAGCTATAATTCTTCCGAACAACAAGACTGTTTTTATCAAAC - >AT3G07340.2
GAAGCTTGTTTCTCCAATTATCTCATTTGGTAAAGACGTTTCATTAGCGATATCGTGTTAACGTCGAAAGTCCTCCTCTCGTTACGGTCCGGTCCGACACAGAAATTTTTATTTAATATTTACTTTATTTTTTGTCCATTTATTAGAAAGAAAGTCATTGATTGGTGCAATTTATTAATATAAATTTATTAAACAACTATATAAACTCCTCATTACTGCCCATTAACGAGCTTCCCTTTTCCTCTGTTCTTCACTTTAAGAAAATTACAAACTTTTATCTTCTATTGGACGAATCTTTGATCTGGTTTTAATTAATCACACGCTTACTTTAGGATTTTTTTACCTGAATTCGAATATATACTTTTGATTTTCATCTTCCGTAGTCCGTACCGTAGAATTGAGGAGCTTCATGGAGAACGAGCTGTTTATGAATGCAGGAGTTTCGCATCCGCCGGTGATGACGTCACCGTCTTCTTCGTCGGCGATGCTTAAGTGGGTTTCAATGGAGACTCAGCCAGTGGATCCAAGTCTCAGTCGCAATCTGTTTTGGGAAAAGTCAACGGAACAGAGCATTTTTGATTCGGCTCTGAGCTCACTCGTCTCTTCTCCTACGCCGTCAAATTCAAACTTTTCGGTTGGCGGAGTAGGTGGAGAAAATGTCATTATGAGAGAGCTCATCGGGAAACTGGGTAATATCGGCGATATCTATGGAATTACGGCGAGCAATGGAAACTCGTGTTACGCAACTCCGATGAGCTCTCCACCGCCTGGAAGTATGATGGAGACGAAAACGACGACGCCGATGGCAGAACTGTCCGGCGACCCGGGATTCGCTGAGAGAGCGGCGAGGTTCTCGTGTTTTGGTAGCCGGAGTTTTAACAGCAGAACAAACTCGCCGTTTCCGATTAATAACGAACCACCCATCACAACCAATGAGAAAATGCCACGTGTATCAAGCAGCCCAGTTTTTAAGCCTCTTGCGTCTCATGTTCCCGCCGGCGAATCGTCCGGTGAACTTTCCCGGAAAAGAAAAACTAAATCCAAGCAGAATTCTCCTTCTGCAGTTTCATCATCAAAGGAGATTGAAGAGAAGGAAGATTCTGATCCAAAGAGATGCAAAAAATCAGAAGAAAATGGAGACAAAACTAAATCAATTGATCCTTACAAAGATTACATTCATGTTAGAGCTCGACGAGGCCAAGCCACCGATAGTCACAGTCTCGCCGAACGAGTTCGAAGAGAGAAAATAAGCGAAAGAATGAAGCTGCTTCAAGATCTTGTCCCTGGATGCAACAAGGTTACTGGAAAAGCACTGATGTTGGATGAAATTATAAACTATGTCCAATCATTGCAACGACAAGTTGAGTTCTTGTCGATGAAGTTATCGTCAGTGAACACCAGGCTGGACTTTAACATGGACGCTCTCTTGTCTAAGGATATATTTCCTTCAAGCAACAATCTAATGCATCATCAACAAGTACTTCAATTAGATTCTTCAGCAGAAACGTTATTGGGTGATCATCACAACAAAAATTTGCAATTGAACCCTGATATTTCTTCTAATAACGTAATAAACCCTTTGGAAACTTCTGAAACTAGAAGCTTCATTTCTCACTTACCAACACTTGCTCATTTCACTGACTCTATTTCTCAGTATTCAACATTTTCCGAAGATGATTTACATAGCATTATTCATATGGGTTTTGCGCAAAACCGTCTCCAAGAATTGAACCAAGGTTCATCAAACCAAGTACCATCGCACATGAAAGCTGAACTTTGATCAACCACTATATGCATTTTTACAAAAATATTGGCGTTTTAAAGGTCTCGAGGATAGAAAGTAAGAAAAGGATTGATGGGTGTACATAACAAGAAATTTGAATTGGACCACACCATATGCGAATTCATTTCTATAATCATCTTCATATACATAACTTCTTCTTTTTATCCTTCCGATTCATTTGTGGTGCTCAATTGTATTGTCATGTTGTTATCCGCTATTCTTCTTCTTATCAGATTCTTTAAACTTTTCTTGTTTGGATTTAATATCATTGTATGTTTTAACCCCACTATAAGTACTATAGCTATAATTCTTCCGAACAACAAGACTGTTTTTATCAAAC
CDS Sequence
- >AT3G07340.1
ATGGAGAACGAGCTGTTTATGAATGCAGGAGTTTCGCATCCGCCGGTGATGACGTCACCGTCTTCTTCGTCGGCGATGCTTAAGTGGGTTTCAATGGAGACTCAGCCAGTGGATCCAAGTCTCAGTCGCAATCTGTTTTGGGAAAAGTCAACGGAACAGAGCATTTTTGATTCGGCTCTGAGCTCACTCGTCTCTTCTCCTACGCCGTCAAATTCAAACTTTTCGGTTGGCGGAGTAGGTGGAGAAAATGTCATTATGAGAGAGCTCATCGGGAAACTGGGTAATATCGGCGATATCTATGGAATTACGGCGAGCAATGGAAACTCGTGTTACGCAACTCCGATGAGCTCTCCACCGCCTGGAAGTATGATGGAGACGAAAACGACGACGCCGATGGCAGAACTGTCCGGCGACCCGGGATTCGCTGAGAGAGCGGCGAGGTTCTCGTGTTTTGGTAGCCGGAGTTTTAACAGCAGAACAAACTCGCCGTTTCCGATTAATAACGAACCACCCATCACAACCAATGAGAAAATGCCACGTGTATCAAGCAGCCCAGTTTTTAAGCCTCTTGCGTCTCATGTTCCCGCCGGCGAATCGTCCGGTGAACTTTCCCGGAAAAGAAAAACTAAATCCAAGCAGAATTCTCCTTCTGCAGTTTCATCATCAAAGGAGATTGAAGAGAAGGAAGATTCTGATCCAAAGAGATGCAAAAAATCAGAAGAAAATGGAGACAAAACTAAATCAATTGATCCTTACAAAGATTACATTCATGTTAGAGCTCGACGAGGCCAAGCCACCGATAGTCACAGTCTCGCCGAACGAGTTCGAAGAGAGAAAATAAGCGAAAGAATGAAGCTGCTTCAAGATCTTGTCCCTGGATGCAACAAGGTTACTGGAAAAGCACTGATGTTGGATGAAATTATAAACTATGTCCAATCATTGCAACGACAAGTTGAGTTCTTGTCGATGAAGTTATCGTCAGTGAACACCAGGCTGGACTTTAACATGGACGCTCTCTTGTCTAAGGATATATTTCCTTCAAGCAACAATCTAATGCATCATCAACAAGTACTTCAATTAGATTCTTCAGCAGAAACGTTATTGGGTGATCATCACAACAAAAATTTGCAATTGAACCCTGATATTTCTTCTAATAACGTAATAAACCCTTTGGAAACTTCTGAAACTAGAAGCTTCATTTCTCACTTACCAACACTTGCTCATTTCACTGACTCTATTTCTCAGTATTCAACATTTTCCGAAGATGATTTACATAGCATTATTCATATGGGTTTTGCGCAAAACCGTCTCCAAGAATTGAACCAAGGTTCATCAAACCAAGTACCATCGCACATGAAAGCTGAACTTTGA - >AT3G07340.2
ATGGAGAACGAGCTGTTTATGAATGCAGGAGTTTCGCATCCGCCGGTGATGACGTCACCGTCTTCTTCGTCGGCGATGCTTAAGTGGGTTTCAATGGAGACTCAGCCAGTGGATCCAAGTCTCAGTCGCAATCTGTTTTGGGAAAAGTCAACGGAACAGAGCATTTTTGATTCGGCTCTGAGCTCACTCGTCTCTTCTCCTACGCCGTCAAATTCAAACTTTTCGGTTGGCGGAGTAGGTGGAGAAAATGTCATTATGAGAGAGCTCATCGGGAAACTGGGTAATATCGGCGATATCTATGGAATTACGGCGAGCAATGGAAACTCGTGTTACGCAACTCCGATGAGCTCTCCACCGCCTGGAAGTATGATGGAGACGAAAACGACGACGCCGATGGCAGAACTGTCCGGCGACCCGGGATTCGCTGAGAGAGCGGCGAGGTTCTCGTGTTTTGGTAGCCGGAGTTTTAACAGCAGAACAAACTCGCCGTTTCCGATTAATAACGAACCACCCATCACAACCAATGAGAAAATGCCACGTGTATCAAGCAGCCCAGTTTTTAAGCCTCTTGCGTCTCATGTTCCCGCCGGCGAATCGTCCGGTGAACTTTCCCGGAAAAGAAAAACTAAATCCAAGCAGAATTCTCCTTCTGCAGTTTCATCATCAAAGGAGATTGAAGAGAAGGAAGATTCTGATCCAAAGAGATGCAAAAAATCAGAAGAAAATGGAGACAAAACTAAATCAATTGATCCTTACAAAGATTACATTCATGTTAGAGCTCGACGAGGCCAAGCCACCGATAGTCACAGTCTCGCCGAACGAGTTCGAAGAGAGAAAATAAGCGAAAGAATGAAGCTGCTTCAAGATCTTGTCCCTGGATGCAACAAGGTTACTGGAAAAGCACTGATGTTGGATGAAATTATAAACTATGTCCAATCATTGCAACGACAAGTTGAGTTCTTGTCGATGAAGTTATCGTCAGTGAACACCAGGCTGGACTTTAACATGGACGCTCTCTTGTCTAAGGATATATTTCCTTCAAGCAACAATCTAATGCATCATCAACAAGTACTTCAATTAGATTCTTCAGCAGAAACGTTATTGGGTGATCATCACAACAAAAATTTGCAATTGAACCCTGATATTTCTTCTAATAACGTAATAAACCCTTTGGAAACTTCTGAAACTAGAAGCTTCATTTCTCACTTACCAACACTTGCTCATTTCACTGACTCTATTTCTCAGTATTCAACATTTTCCGAAGATGATTTACATAGCATTATTCATATGGGTTTTGCGCAAAACCGTCTCCAAGAATTGAACCAAGGTTCATCAAACCAAGTACCATCGCACATGAAAGCTGAACTTTGA
Protein Sequence
- >AT3G07340.1
MENELFMNAGVSHPPVMTSPSSSSAMLKWVSMETQPVDPSLSRNLFWEKSTEQSIFDSALSSLVSSPTPSNSNFSVGGVGGENVIMRELIGKLGNIGDIYGITASNGNSCYATPMSSPPPGSMMETKTTTPMAELSGDPGFAERAARFSCFGSRSFNSRTNSPFPINNEPPITTNEKMPRVSSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDHHNKNLQLNPDISSNNVINPLETSETRSFISHLPTLAHFTDSISQYSTFSEDDLHSIIHMGFAQNRLQELNQGSSNQVPSHMKAEL - >AT3G07340.2
MENELFMNAGVSHPPVMTSPSSSSAMLKWVSMETQPVDPSLSRNLFWEKSTEQSIFDSALSSLVSSPTPSNSNFSVGGVGGENVIMRELIGKLGNIGDIYGITASNGNSCYATPMSSPPPGSMMETKTTTPMAELSGDPGFAERAARFSCFGSRSFNSRTNSPFPINNEPPITTNEKMPRVSSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDHHNKNLQLNPDISSNNVINPLETSETRSFISHLPTLAHFTDSISQYSTFSEDDLHSIIHMGFAQNRLQELNQGSSNQVPSHMKAEL