Gene Details:

  • Gene ID: AT3G07170
  • Gene Symbol: IRP1
  • Gene Name: INVOLVED IN rRNA PROCESSING 1
  • Description: Sterile alpha motif (SAM) domain-containing protein;(source:Araport11)
  • TAIR Accession: locus:2098550
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Gene Ontology:

  • GO:0005737  — located in — cytoplasm
  • GO:0006364  — acts upstream of or within — rRNA processing
  • GO:0016757  — enables — glycosyltransferase activity
  • GO:0005730  — located in — nucleolus
  • GO:0005634  — located in — nucleus

Germplasm Phenotype:

  • irp1-1  — Early flowering.

Literature:

Sequences:

cDNA Sequence
  • >AT3G07170.2
    TCTATCTCCCTCTCTCCGTCATAATTCTATTGAGATATATCTTGCTTTCCTCGAAAATTCTTCAGTATGTTAGCTGGTACTTGGTGTTAGAGTCTTTTCCTCTTGTGTATAATCTTCCTTGTAGCATCCCCAAGTTTGATTCTTGCTTCGCTCTATGAATTAGAGTATGGAATCCGCTCTTTTTGTTAGCTTACTAGGACTCTCTGATTTGCCCATTTTGAATTGGCAAAGGCAGGACGACAAATGGGAGCATGATCTTTTCAGTAGTGACAAACCTCAACTTTCAAATCGCAGGGTTGATCCTAGAGATCTTCGTTTGAAGCTCCAAAAGAGACATCATGGGTCTCAAAGTGGGCGAGAAGCTGGTTCAGGCGTGCGGGATTTACGGGATCAGCTCTCTGGGACAATGAATCAGCAACCAAAAAACAGTGACCCACCAAAATCCAAAGCGGAGGCTGCTAGGCCAAGTATGAAGAGCGTAGCGACTGAAACAGAGACTAGAAAAACTTCCAGTCAAGCTACCAGGAAGAAATCACAGCAGGCTGATTCATCGGTTGATAGCTTTCTTGAATCATTGGGTCTCGAGAAATATTCAACAGCGTTTCAAGTGGAAGAAGTTGATATGGATGCTCTCATGCATATGACAGATGATGACCTCAAGGCTATGCTCATACCGATGGGTCCGAGGAAGAAGATACTTCTTGCTTTGGGATCTAAACCCTAA
  • >AT3G07170.1
    TCTATCTCCCTCTCTCCGTCATAATTCTATTGAGATATATCTTGCTTTCCTCGAAAATTCTTCAGTATGTTAGCTGGTACTTGGTGTTAGAGTCTTTTCCTCTTGTGTATAATCTTCCTTGTAGCATCCCCAAGTTTGATTCTTGCTTCGCTCTATGAATTAGAGTATGGAATCCGCTCTTTTTGTTAGCTTACTAGGACTCTCTGATTTGCCCATTTTGAATTGGCAAAGGCAGGACGACAAATGGGAGCATGATCTTTTCAGTAGTGACAAACCTCAACTTTCAAATCGCAGGGTTGATCCTAGAGATCTTCGTTTGAAGCTCCAAAAGAGACATCATGGGTCTCAAAGTGGGCGAGAAGCTGGTTCAGGCGTGCGGGATTTACGGGATCAGCTCTCTGGGACAATGAATCAGCAACCAAAAAACAGTGACCCACCAAAATCCAAAGCGGAGGCTGCTAGGCCAAGTATGAAGAGCGTAGCGACTGAAACAGAGACTAGAAAAACTTCCAGTCAAGCTACCAGGAAGAAATCACAGCAGGCTGATTCATCGGTTGATAGCTTTCTTGAATCATTGGGTCTCGAGAAATATTCAACAGCGTTTCAAGTGGAAGAAGTTGATATGGATGCTCTCATGCATATGACAGATGATGACCTCAAGGCTATGCTCATACCGATGGGTCCGAGGAAGAAGATACTTCTTGCTTTGGGATCTAAACCCTAA
CDS Sequence
  • >AT3G07170.2
    ATGGAATCCGCTCTTTTTGTTAGCTTACTAGGACTCTCTGATTTGCCCATTTTGAATTGGCAAAGGCAGGACGACAAATGGGAGCATGATCTTTTCAGTAGTGACAAACCTCAACTTTCAAATCGCAGGGTTGATCCTAGAGATCTTCGTTTGAAGCTCCAAAAGAGACATCATGGGTCTCAAAGTGGGCGAGAAGCTGGTTCAGGCGTGCGGGATTTACGGGATCAGCTCTCTGGGACAATGAATCAGCAACCAAAAAACAGTGACCCACCAAAATCCAAAGCGGAGGCTGCTAGGCCAAGTATGAAGAGCGTAGCGACTGAAACAGAGACTAGAAAAACTTCCAGTCAAGCTACCAGGAAGAAATCACAGCAGGCTGATTCATCGGTTGATAGCTTTCTTGAATCATTGGGTCTCGAGAAATATTCAACAGCGTTTCAAGTGGAAGAAGTTGATATGGATGCTCTCATGCATATGACAGATGATGACCTCAAGGCTATGCTCATACCGATGGGTCCGAGGAAGAAGATACTTCTTGCTTTGGGATCTAAACCCTAA
  • >AT3G07170.1
    ATGGAATCCGCTCTTTTTGTTAGCTTACTAGGACTCTCTGATTTGCCCATTTTGAATTGGCAAAGGCAGGACGACAAATGGGAGCATGATCTTTTCAGTAGTGACAAACCTCAACTTTCAAATCGCAGGGTTGATCCTAGAGATCTTCGTTTGAAGCTCCAAAAGAGACATCATGGGTCTCAAAGTGGGCGAGAAGCTGGTTCAGGCGTGCGGGATTTACGGGATCAGCTCTCTGGGACAATGAATCAGCAACCAAAAAACAGTGACCCACCAAAATCCAAAGCGGAGGCTGCTAGGCCAAGTATGAAGAGCGTAGCGACTGAAACAGAGACTAGAAAAACTTCCAGTCAAGCTACCAGGAAGAAATCACAGCAGGCTGATTCATCGGTTGATAGCTTTCTTGAATCATTGGGTCTCGAGAAATATTCAACAGCGTTTCAAGTGGAAGAAGTTGATATGGATGCTCTCATGCATATGACAGATGATGACCTCAAGGCTATGCTCATACCGATGGGTCCGAGGAAGAAGATACTTCTTGCTTTGGGATCTAAACCCTAA
Protein Sequence
  • >AT3G07170.2
    MESALFVSLLGLSDLPILNWQRQDDKWEHDLFSSDKPQLSNRRVDPRDLRLKLQKRHHGSQSGREAGSGVRDLRDQLSGTMNQQPKNSDPPKSKAEAARPSMKSVATETETRKTSSQATRKKSQQADSSVDSFLESLGLEKYSTAFQVEEVDMDALMHMTDDDLKAMLIPMGPRKKILLALGSKP
  • >AT3G07170.1
    MESALFVSLLGLSDLPILNWQRQDDKWEHDLFSSDKPQLSNRRVDPRDLRLKLQKRHHGSQSGREAGSGVRDLRDQLSGTMNQQPKNSDPPKSKAEAARPSMKSVATETETRKTSSQATRKKSQQADSSVDSFLESLGLEKYSTAFQVEEVDMDALMHMTDDDLKAMLIPMGPRKKILLALGSKP