Information report for AT3G07110
Gene Details
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Functional Descriptions
- GO:0003729 — enables — mRNA binding
- GO:0017148 — involved in — negative regulation of translation
- GO:0022625 — located in — cytosolic large ribosomal subunit
- GO:0009506 — located in — plasmodesma
- GO:0006412 — involved in — translation
- GO:0005829 — located in — cytosol
- GO:0022626 — located in — cytosolic ribosome
- GO:0022625 — part of — cytosolic large ribosomal subunit
- GO:0005730 — located in — nucleolus
- GO:0005840 — is active in — ribosome
- GO:0003735 — enables — structural constituent of ribosome
- GO:0005737 — located in — cytoplasm
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- The Arabidopsis co-expression tool (ACT): a WWW-based tool and database for microarray-based gene expression analysis. DOI: 10.1111/j.1365-313X.2006.02681.x ; PMID: 16623895
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying and up-regulation. DOI: 10.1093/jxb/ert227 ; PMID: 24064926
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Gene Resources
- UniProt: A0A178VCI5
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VCI5
- EnsemblPlants: AT3G07110.1
- Gramene: AT3G07110.1
- KEGG: ath:AT3G07110
- Orthologous matrix: RMAHDRY
- ExpressionAtlas: AT3G07110
- InterPro: IPR005755, IPR005822, IPR023563
- PANTHER: PTHR11545, PTHR11545:SF39
- SUPFAM: SSF52161
- PROSITE: PS00783
- Gene3D: 3.90.1180.10, 6.10.250.3250
- OrthoDB: A0A178VCI5
- SWISS-MODEL: A0A178VCI5
- Conserved Domain Database: cd00392
Homologs
- Actinidia chinensis Achn253811
Sequences
cDNA Sequence
- >AT3G07110.1
TAAACTAAGTACATAACCCAACAGACAATTATCACGGCCCAATAAAATGGTGCTAAAAGGCACCGCAAAACCCTAATTTGAATAAGCTGCTCACTTTTAATCACCCCGGAGTAGTAAGCTTGCGGCTGATCAGAGCTGAGTGAAAAATGGTGTCTGGATCAGGAATTTGCGCGAAGCGCGTGGTGGTTGATGCTCGTCACCACATGCTAGGTCGCTTGGCTTCGGTTGTAGCAAAGGATCTGCTCAATGGCCAGAATATTGTGGTTGTCCGGTGCGAGGAGATTTGTCTCTCCGGCGGACTTGTTCGTCAGAAGATGAAGTACATGAGGTTTCTCCGTAAGCGTATGAACACTAAACCTTCTCACGGACCTATTCACTTCCGTGCTCCCTCCAAGATCTTCTGGCGTACCGTTCGCGGTATGATTCCACACAAGACTAAGCGTGGAGCTAATGCACTTGCCCGCTTGAAGGTCTTTGAAGGAGTTCCTACTCCATATGACAAGATCAAGAGGATGGTCGTTCCTGATGCTCTCAAGGTCTTGAGGCTGCAGGCTGGACACAAATACTGTCTGTTGGGTCGCCTTTCTTCTGAAGTCGGGTGGAACCACTACGACACCATCAAGGAGCTGGAGAACAAGAGAAAGGAAAGAGCTCAAGCTGTTTATGAGAGAAAGAAGCAACTTAGCAAACTCAGAGCTAAGGCCGAGAAGGTTGCTGAAGAGAAGCTTGGATCTCAATTGGATGTTCTTGCACCCGTCAAGTACTGAATTCAATCAGTTTATCGTATTTGAATGTTTTTGCAAGTTTTGCTCAGACATTATACTATTATATTACGAGGTTTTGTTGTATGCGATTTTGACTTAGTTTATTTCTTGAATTCGACTTTACTTAGTTTATTTCTTGAATTCGTCTTTTGTCATGCGCCTCCTCCAAAACGTTTCGTGATTTATTTTTCCTCTGCATATATCATCCTCTGTAATCTGTATCATGCCGAAGTCTTAGAATCTCGTAGATTTTCCTTTTGGCAAATAC - >AT3G07110.2
TAAACTAAGTACATAACCCAACAGACAATTATCACGGCCCAATAAAATGGTGCTAAAAGGCACCGCAAAACCCTAATTTGAATAAGCTGCTCACTTTTAATCACCCCGGAGTAGTAAGCTTGCGGCTGATCAGAGCTGAGTGAAAAATGGTGTCTGGATCAGGAATTTGCGCGAAGCGCGTGGTGGTTGATGCTCGTCACCACATGCTAGGTCGCTTGGCTTCGGTTGTAGCAAAGGATCTGCTCAATGGCCAGAATATTGTGGTTGTCCGGTGCGAGGAGATTTGTCTCTCCGGCGGACTTGTTCGTCAGAAGATGAAGTACATGAGGTTTCTCCGTAAGCGTATGAACACTAAACCTTCTCACGGACCTATTCACTTCCGTGCTCCCTCCAAGATCTTCTGGCGTACCGTTCGCGGTATGATTCCACACAAGACTAAGCGTGGAGCTAATGCACTTGCCCGCTTGAAGGTCTTTGAAGGAGTTCCTACTCCATATGACAAGATCAAGAGGATGGTCGTTCCTGATGCTCTCAAGGTCTTGAGGCTGCAGGCTGGACACAAATACTGTCTGTTGGGTCGCCTTTCTTCTGAAGTCGGGTGGAACCACTACGACACCATCAAGGAGCTGGAGAACAAGAGAAAGGAAAGAGCTCAAGCTGTTTATGAGAGAAAGAAGCAACTTAGCAAACTCAGAGCTAAGGCCGAGAAGGTTGCTGAAGAGAAGCTTGGATCTCAATTGGATGTTCTTGCACCCGTCAAGTACTGAATTCAATCAGTTTATCGTATTTGAATGTTTTTGCAAGTTTTGCTCAGACATTATACTATTATATTACGAGGTTTTGTTGTATGCGATTTTGACTTAGTTTATTTCTTGAATTCGACTTTACTTAGTTTATTTCTTGAATTCGTCTTTTGTCATGCGCCTCCTCCAAAACGTTTCGTGATTTATTTTTCCTCTGCATATATCATCCTCTGTAATCTGTATCATGCCGAAGTCTTAGAATCTCGTAGATTTTCCTTTTGGCAAATAC
CDS Sequence
- >AT3G07110.1
ATGGTGTCTGGATCAGGAATTTGCGCGAAGCGCGTGGTGGTTGATGCTCGTCACCACATGCTAGGTCGCTTGGCTTCGGTTGTAGCAAAGGATCTGCTCAATGGCCAGAATATTGTGGTTGTCCGGTGCGAGGAGATTTGTCTCTCCGGCGGACTTGTTCGTCAGAAGATGAAGTACATGAGGTTTCTCCGTAAGCGTATGAACACTAAACCTTCTCACGGACCTATTCACTTCCGTGCTCCCTCCAAGATCTTCTGGCGTACCGTTCGCGGTATGATTCCACACAAGACTAAGCGTGGAGCTAATGCACTTGCCCGCTTGAAGGTCTTTGAAGGAGTTCCTACTCCATATGACAAGATCAAGAGGATGGTCGTTCCTGATGCTCTCAAGGTCTTGAGGCTGCAGGCTGGACACAAATACTGTCTGTTGGGTCGCCTTTCTTCTGAAGTCGGGTGGAACCACTACGACACCATCAAGGAGCTGGAGAACAAGAGAAAGGAAAGAGCTCAAGCTGTTTATGAGAGAAAGAAGCAACTTAGCAAACTCAGAGCTAAGGCCGAGAAGGTTGCTGAAGAGAAGCTTGGATCTCAATTGGATGTTCTTGCACCCGTCAAGTACTGA - >AT3G07110.2
ATGGTGTCTGGATCAGGAATTTGCGCGAAGCGCGTGGTGGTTGATGCTCGTCACCACATGCTAGGTCGCTTGGCTTCGGTTGTAGCAAAGGATCTGCTCAATGGCCAGAATATTGTGGTTGTCCGGTGCGAGGAGATTTGTCTCTCCGGCGGACTTGTTCGTCAGAAGATGAAGTACATGAGGTTTCTCCGTAAGCGTATGAACACTAAACCTTCTCACGGACCTATTCACTTCCGTGCTCCCTCCAAGATCTTCTGGCGTACCGTTCGCGGTATGATTCCACACAAGACTAAGCGTGGAGCTAATGCACTTGCCCGCTTGAAGGTCTTTGAAGGAGTTCCTACTCCATATGACAAGATCAAGAGGATGGTCGTTCCTGATGCTCTCAAGGTCTTGAGGCTGCAGGCTGGACACAAATACTGTCTGTTGGGTCGCCTTTCTTCTGAAGTCGGGTGGAACCACTACGACACCATCAAGGAGCTGGAGAACAAGAGAAAGGAAAGAGCTCAAGCTGTTTATGAGAGAAAGAAGCAACTTAGCAAACTCAGAGCTAAGGCCGAGAAGGTTGCTGAAGAGAAGCTTGGATCTCAATTGGATGTTCTTGCACCCGTCAAGTACTGA
Protein Sequence
- >AT3G07110.1
MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKIKRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY - >AT3G07110.2
MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKIKRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY