Information report for AT3G07100
Gene Details
|
|
Functional Descriptions
- GO:0005515 — enables — protein binding
- GO:0006888 — involved in — endoplasmic reticulum to Golgi vesicle-mediated transport
- GO:0009555 — involved in — pollen development
- GO:0090392 — acts upstream of negative effect — sepal giant cell differentiation
- GO:0046740 — acts upstream of or within — transport of virus in host, cell to cell
- GO:0008270 — enables — zinc ion binding
- GO:0006886 — involved in — intracellular protein transport
- GO:0030127 — part of — COPII vesicle coat
- GO:0070971 — is active in — endoplasmic reticulum exit site
- GO:0048232 — acts upstream of or within — male gamete generation
- GO:0032876 — acts upstream of or within — negative regulation of DNA endoreduplication
- GO:0007029 — involved in — endoplasmic reticulum organization
- GO:0080119 — acts upstream of or within — ER body organization
- GO:0007030 — acts upstream of or within — Golgi organization
- GO:0007030 — involved in — Golgi organization
- GO:0090110 — involved in — COPII-coated vesicle cargo loading
- GO:0007029 — acts upstream of or within — endoplasmic reticulum organization
- GO:0005794 — located in — Golgi apparatus
- GO:0005829 — located in — cytosol
- GO:0009507 — located in — chloroplast
- GO:0000149 — enables — SNARE binding
- GO:0008361 — acts upstream of or within — regulation of cell size
- CS68909 — Homozygous sec24a-2 mutants have the following phenotypes: ectopic giant cells in sepals and leaves; dwarfism; male sterile; increased lobing of pavement cells on sepals; abnormal ER morphology; abnormal Golgi morphology; prominent shoot developmental defects
- CS72568 — marker localization to Golgi stacks and large fluorescent globular structures
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- A chloroplast-localized vesicular transport system: a bio-informatics approach. DOI: 10.1186/1471-2164-5-40 ; PMID: 15236667
- Redundant function of two Arabidopsis COPII components, AtSec24B and AtSec24C, is essential for male and female gametogenesis. DOI: 10.1007/s00425-013-1913-1 ; PMID: 23779001
- Endomembrane trafficking protein SEC24A regulates cell size patterning in Arabidopsis. DOI: 10.1104/pp.114.246033 ; PMID: 25315606
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Gene Resources
- UniProt: A0A178V9J3
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178V9J3
- EnsemblPlants: AT3G07100.1
- Gramene: AT3G07100.1
- KEGG: ath:AT3G07100
- Orthologous matrix: AVECSKQ
- ExpressionAtlas: AT3G07100
- InterPro: IPR006895, IPR006896, IPR006900
- PANTHER: PTHR13803, PTHR13803:SF39
- SUPFAM: SSF53300, SSF81811, SSF81995
- Gene3D: 1.20.120.730, 2.30.30.380, 2.60.40.1670
- OrthoDB: A0A178V9J3
- SWISS-MODEL: A0A178V9J3
- Conserved Domain Database: cd01479
Sequences
cDNA Sequence
- >AT3G07100.1
GAAACTGTTAAATGGGCTGGAGAGATATAAAACTGTTAGCCACTACCTGGCCCATAATATATCACATCGTCTCTTTCGCTGCACTTGGTGGTTCTCCAATTCCGTATCGAAAATCTTCTTCGGGTCAGACGATCTGAAGCCGATCGCTGTAGAATCAGTTTCGTGCTCCGCAGTTTCTCGAGTTTCCTCTCACTTCAGATCTTCATAAGAGAATTCACTTACGGAGAGGGACTTTTTCGTAGACGATTCTCACTGGATATCTATCACCCGGTAAGATCGTCTTGCTCGAAAAGAATTGAAAAGTTTTTAAGTAATTGAATAAGGAACTGTGAATCGGAGAGGCTTACTTTTTTGAAAAGATCTAAACCATCGTAGAAGATCGTCCTCAAATATCTCACAGAAGTTACCAATTTTGAAAGATCACTAGAGATAGCTACGGATTTTGAGAGGCGGATCTGTCCAGGTCGGCACTGTGAAAGAGAACTACACTGGTTTTTTCCAGATGATATGAAGCTTCCGTGAACGAATCTGATTCTAAGGTACTCATCGAAGAGAATCTGGGATTGTATTGATCTGGTCCCTTAGCTTCCAGTTTGGCTATAACTCTGACAACTGTTGTAAGTGATAAGTTGTGATCAATAATGGGTACGGAGAATCAGGGCTATCCAAATTTTCCAGCTAGGCCTGCTTCCTCTCCATTTGCATCTGCTCCGCCACCAGGGATTCCTCCTCAATCAGGTGGACCACCCACTGGATCAGAGGCGGTTGGCTTTAGACCTTTTACACCATCTGCATCCCAACCTACAAGACCTTTCACTGCCTCTGGTCCTCCTCCGGCTCCACCAGTGGGTACGATGAGGCCTGGCCAGCCGTCTCCTTTTGTTTCTCAGATTCCTGGGAGTAGACCTCCACCGCCATCATCAAATTCGTTTCCTTCACCAGCATATGGTCCTCCTGGTGGTGCCCCTTTTCAGCGTTTTCCATCCCCGCCATTCCCGACTACACAAAACCCTCCTCAGGGCCCACCACCACCTCAAACTCTTGCAGGTCACTTATCTCCTCCTATGTCTCTTCGCCCACAGCAACCGATGGCACCTGTAGCAATGGGGCCTCCGCCACAAAGTACGACTTCTGGGCTACCTGGAGCAAATGCTTATCCCCCTGCTACAGATTATCATATGCCTGCCAGGCCTGGTTTTCAACAGTCAATGCCTCCAGTTACTCCGTCTTATCCTGGCGTGGGCGGTTCGCAGCCATCTTTTCCTGGTTATCCTAGCAAGCAGGTCTTACAGGCTCCGACGCCATTCCAGACATCTCAAGGTCCCCCAGGACCCCCTCCAGTCTCATCATATCCTCCTCACACAGGAGGTTTTGCTCAGCGACCAAATATGGCAGCACAGCAGAATCTGCATCCAAACTATGCACCTCCTCCCAGTAACGTTCAAGGCTTGACTGAAGATTTTAACTCGCTATCTCTTTCATCTATTCCTGGATCGCTGGAACCAGGACTTGATCATAAATCATTCCCAAGGCCATTGGATGGTGACGTGGAGCCAAATTCATTTGCTGAAATGTACCCAATGAATTGCCATTCTAGATATCTACGACTGACGACTAGTGCTATACCAAATTCCCAGTCTCTGGCTTCAAGGTGGCATTTACCTCTAGGAGCTGTGGTTTGTCCACTTGCTGAGACTCCTGAAGGGGAGGAGGTACCACTTATTGATTTTGGCTCAACTGGCATCATCCGCTGCAGAAGATGCCGTACCTATGTGAATCCTTTTGTGACTTTTACAGATTCTGGAAGAAAGTGGCGGTGTAATATATGTTCGATGCTTAATGATGTGCCTGGTGAATACTTCTCACATTTGGATGCTACTGGCCGAAGAATGGATATGGATCAACGACCTGAGCTGACTAAAGGCAGTGTTGAAATCATAGCTCCAACTGAATACATGGTTCGGCCTCCGATGCCACCTATCTACTTCTTCCTCATTGATGTTTCGATTTCGGCTACTAAAAGTGGAATGCTTGAGGTTGTTGCTCAAACGATTAAGTCTTGTTTGGATAACCTGCCTGGTTATCCAAGAACTCAAATTGGATTTATTACTTATGACAGCACGTTACATTTTTACAACATGAAGTCATCTTTGAGCCAGCCGCAGATGATGGTTGTATCAGATCTAGATGATATCTTTGTCCCATTGCCAGACGATCTGCTTGTAAATCTATCTGAATCTAGAACTGTGGTGGACGCCTTTTTGGACAGTCTACCTTTGATGTTTCAAGATAATTTCAATGTGGAATCAGCTTTTGGCCCAGCCCTCAGAGCGGCGTTTATGGTTATGAACCAACTTGGGGGCAAGTTACTAATTTTCCAGAACTCATTACCTTCTCTTGGTGCTGGGAGGTTAAAGTTGCGGGGAGATGATCCTCGTGTCTATGGAACTGACAAAGAATATGCATTAAGGGTAGCTGAAGATCCCTTCTATAAACAAATGGCTGCTGATTGTACCAAGTTCCAGATAGGAATTAATGTTTATGCATTCAGTGATAAGTACACTGATATTGCCTCATTAGGGACTCTGGCAAAATACACTGGAGGACAGGTGTACTATTATCCAGGTTTCCAATCATCTGTTCATGGAGATAAGTTAAGACACGAGCTTGCTAGAGACCTTACAAGGGAAACTGCGTGGGAGGCGGTTATGCGAATAAGATGTGGAAAAGGAATTCGTTTCTCGTCCTACCATGGGAACTTCATGCTAAGGTCTACTGACCTGCTTGCTCTTCCTGCTGTTGACTGTGACAAAGCGTATGCAATGCAGCTATCTCTTGAGGAGACTTTGCTAACATCCCAGACTGTGTATTTCCAAGTGGCTTTGCTATATACCGCCTCTTGTGGAGAGAGACGTATAAGGGTACACACATCTGTTGCACCAGTGGTTACAGATCTTGGGGAGATGTATAGACAAGCAGACACTGGTTCCATTGTGTCTTTATATGCTAGATTAGCAATTGAGAAATCTTTGTCCGCAAAATTGGATGATGCACGGAATGCAATACAGCAAAAGATTGTTAAAGCCCTCAAAGAATATCGTAATCTTCACGCGGTGCAGCATCGCTTGGGGTCCAGATTAGTATACCCAGAGTCTCTGAAGTTCTTGCCATTGTACGGATTGGCAATTACTAAGTCCACTCCTCTTCTAGGTGGACCTGCTGATACTTCTCTTGATGAGCGCTGTGCTGCAGGCTTCACCATGATGGCTCTGCCTGTCAAAAAGCTATTGAAGCTTTTGTATCCCAATTTATTCCGTGTTGACGAATGGCTCTTAAAGCCATCAGCAGCCCACGATGACTTTAAAGACGTATTAAGGAGATTGCCGCTGGCTGCAGAGAGTTTGGATTCTAGAGGCCTTTACATATATGATGATGGTTTTCGATTAGTTTTGTGGTTTGGCCGGATGCTTTCACCTGACATTGCTAAAAATCTTCTTGGGGTTGACTTTGCAGCAGACCTCTCAAGGGTTACCTTTCAAGAGCAAGAGAATGGGATGTCAAAGAAGCTAATGAGGTTGGTAAAGAAACTGAGGGAGAGTGATCCTTCATATCACCCCATGTGTTTTCTAGTGAGACAAGGAGAACAACCCCGAGAAGGCTTCCTTCTCCTCAGAAATCTCATTGAGGACCAGATGGGCGGTTCGAGTGGTTATGTCGATTGGATTCTACAACTTCACCGCCAAGTTCAACAAAACTAAGATAGCTCACAATGACAACTCGGGTGCTAGGATGCCACCTCTTTGTAACCATTGAAGAACTCTTGAGCTCAAAAATCTTCTACTTAAGCAGGATCATGGCGGCCTTCTTCCTTGGGCCATAATGTGTTGTTTTGGATAAAGAAGTGCTACTTTTTGATTTTTCTTCATTTGTTTTTCTATATAGACCTTTTTTCTCAAGATTAGGCTTTTATTTGCCTAACCAGAATGGTTATCTCCGTAAGATTAGTCGTTTTTTAAATCTTTTGTTGCCTTTTTTTTTTGTCCTCATTCGATTTTTTGTTGATGTGCGTCTGTTCTAGATTTATTTTGGGAGTTGCAGTTCATGAATCTGTCCTAATTAGGGTTATTAACAAGAAGATGCTACTGTTAAAATTTTAAAATATTTTTATGAATAAATAATGTTGTGAAAACCTT
CDS Sequence
- >AT3G07100.1
ATGGGTACGGAGAATCAGGGCTATCCAAATTTTCCAGCTAGGCCTGCTTCCTCTCCATTTGCATCTGCTCCGCCACCAGGGATTCCTCCTCAATCAGGTGGACCACCCACTGGATCAGAGGCGGTTGGCTTTAGACCTTTTACACCATCTGCATCCCAACCTACAAGACCTTTCACTGCCTCTGGTCCTCCTCCGGCTCCACCAGTGGGTACGATGAGGCCTGGCCAGCCGTCTCCTTTTGTTTCTCAGATTCCTGGGAGTAGACCTCCACCGCCATCATCAAATTCGTTTCCTTCACCAGCATATGGTCCTCCTGGTGGTGCCCCTTTTCAGCGTTTTCCATCCCCGCCATTCCCGACTACACAAAACCCTCCTCAGGGCCCACCACCACCTCAAACTCTTGCAGGTCACTTATCTCCTCCTATGTCTCTTCGCCCACAGCAACCGATGGCACCTGTAGCAATGGGGCCTCCGCCACAAAGTACGACTTCTGGGCTACCTGGAGCAAATGCTTATCCCCCTGCTACAGATTATCATATGCCTGCCAGGCCTGGTTTTCAACAGTCAATGCCTCCAGTTACTCCGTCTTATCCTGGCGTGGGCGGTTCGCAGCCATCTTTTCCTGGTTATCCTAGCAAGCAGGTCTTACAGGCTCCGACGCCATTCCAGACATCTCAAGGTCCCCCAGGACCCCCTCCAGTCTCATCATATCCTCCTCACACAGGAGGTTTTGCTCAGCGACCAAATATGGCAGCACAGCAGAATCTGCATCCAAACTATGCACCTCCTCCCAGTAACGTTCAAGGCTTGACTGAAGATTTTAACTCGCTATCTCTTTCATCTATTCCTGGATCGCTGGAACCAGGACTTGATCATAAATCATTCCCAAGGCCATTGGATGGTGACGTGGAGCCAAATTCATTTGCTGAAATGTACCCAATGAATTGCCATTCTAGATATCTACGACTGACGACTAGTGCTATACCAAATTCCCAGTCTCTGGCTTCAAGGTGGCATTTACCTCTAGGAGCTGTGGTTTGTCCACTTGCTGAGACTCCTGAAGGGGAGGAGGTACCACTTATTGATTTTGGCTCAACTGGCATCATCCGCTGCAGAAGATGCCGTACCTATGTGAATCCTTTTGTGACTTTTACAGATTCTGGAAGAAAGTGGCGGTGTAATATATGTTCGATGCTTAATGATGTGCCTGGTGAATACTTCTCACATTTGGATGCTACTGGCCGAAGAATGGATATGGATCAACGACCTGAGCTGACTAAAGGCAGTGTTGAAATCATAGCTCCAACTGAATACATGGTTCGGCCTCCGATGCCACCTATCTACTTCTTCCTCATTGATGTTTCGATTTCGGCTACTAAAAGTGGAATGCTTGAGGTTGTTGCTCAAACGATTAAGTCTTGTTTGGATAACCTGCCTGGTTATCCAAGAACTCAAATTGGATTTATTACTTATGACAGCACGTTACATTTTTACAACATGAAGTCATCTTTGAGCCAGCCGCAGATGATGGTTGTATCAGATCTAGATGATATCTTTGTCCCATTGCCAGACGATCTGCTTGTAAATCTATCTGAATCTAGAACTGTGGTGGACGCCTTTTTGGACAGTCTACCTTTGATGTTTCAAGATAATTTCAATGTGGAATCAGCTTTTGGCCCAGCCCTCAGAGCGGCGTTTATGGTTATGAACCAACTTGGGGGCAAGTTACTAATTTTCCAGAACTCATTACCTTCTCTTGGTGCTGGGAGGTTAAAGTTGCGGGGAGATGATCCTCGTGTCTATGGAACTGACAAAGAATATGCATTAAGGGTAGCTGAAGATCCCTTCTATAAACAAATGGCTGCTGATTGTACCAAGTTCCAGATAGGAATTAATGTTTATGCATTCAGTGATAAGTACACTGATATTGCCTCATTAGGGACTCTGGCAAAATACACTGGAGGACAGGTGTACTATTATCCAGGTTTCCAATCATCTGTTCATGGAGATAAGTTAAGACACGAGCTTGCTAGAGACCTTACAAGGGAAACTGCGTGGGAGGCGGTTATGCGAATAAGATGTGGAAAAGGAATTCGTTTCTCGTCCTACCATGGGAACTTCATGCTAAGGTCTACTGACCTGCTTGCTCTTCCTGCTGTTGACTGTGACAAAGCGTATGCAATGCAGCTATCTCTTGAGGAGACTTTGCTAACATCCCAGACTGTGTATTTCCAAGTGGCTTTGCTATATACCGCCTCTTGTGGAGAGAGACGTATAAGGGTACACACATCTGTTGCACCAGTGGTTACAGATCTTGGGGAGATGTATAGACAAGCAGACACTGGTTCCATTGTGTCTTTATATGCTAGATTAGCAATTGAGAAATCTTTGTCCGCAAAATTGGATGATGCACGGAATGCAATACAGCAAAAGATTGTTAAAGCCCTCAAAGAATATCGTAATCTTCACGCGGTGCAGCATCGCTTGGGGTCCAGATTAGTATACCCAGAGTCTCTGAAGTTCTTGCCATTGTACGGATTGGCAATTACTAAGTCCACTCCTCTTCTAGGTGGACCTGCTGATACTTCTCTTGATGAGCGCTGTGCTGCAGGCTTCACCATGATGGCTCTGCCTGTCAAAAAGCTATTGAAGCTTTTGTATCCCAATTTATTCCGTGTTGACGAATGGCTCTTAAAGCCATCAGCAGCCCACGATGACTTTAAAGACGTATTAAGGAGATTGCCGCTGGCTGCAGAGAGTTTGGATTCTAGAGGCCTTTACATATATGATGATGGTTTTCGATTAGTTTTGTGGTTTGGCCGGATGCTTTCACCTGACATTGCTAAAAATCTTCTTGGGGTTGACTTTGCAGCAGACCTCTCAAGGGTTACCTTTCAAGAGCAAGAGAATGGGATGTCAAAGAAGCTAATGAGGTTGGTAAAGAAACTGAGGGAGAGTGATCCTTCATATCACCCCATGTGTTTTCTAGTGAGACAAGGAGAACAACCCCGAGAAGGCTTCCTTCTCCTCAGAAATCTCATTGAGGACCAGATGGGCGGTTCGAGTGGTTATGTCGATTGGATTCTACAACTTCACCGCCAAGTTCAACAAAACTAA
Protein Sequence
- >AT3G07100.1
MGTENQGYPNFPARPASSPFASAPPPGIPPQSGGPPTGSEAVGFRPFTPSASQPTRPFTASGPPPAPPVGTMRPGQPSPFVSQIPGSRPPPPSSNSFPSPAYGPPGGAPFQRFPSPPFPTTQNPPQGPPPPQTLAGHLSPPMSLRPQQPMAPVAMGPPPQSTTSGLPGANAYPPATDYHMPARPGFQQSMPPVTPSYPGVGGSQPSFPGYPSKQVLQAPTPFQTSQGPPGPPPVSSYPPHTGGFAQRPNMAAQQNLHPNYAPPPSNVQGLTEDFNSLSLSSIPGSLEPGLDHKSFPRPLDGDVEPNSFAEMYPMNCHSRYLRLTTSAIPNSQSLASRWHLPLGAVVCPLAETPEGEEVPLIDFGSTGIIRCRRCRTYVNPFVTFTDSGRKWRCNICSMLNDVPGEYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMVRPPMPPIYFFLIDVSISATKSGMLEVVAQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMVVSDLDDIFVPLPDDLLVNLSESRTVVDAFLDSLPLMFQDNFNVESAFGPALRAAFMVMNQLGGKLLIFQNSLPSLGAGRLKLRGDDPRVYGTDKEYALRVAEDPFYKQMAADCTKFQIGINVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSVHGDKLRHELARDLTRETAWEAVMRIRCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLSLEETLLTSQTVYFQVALLYTASCGERRIRVHTSVAPVVTDLGEMYRQADTGSIVSLYARLAIEKSLSAKLDDARNAIQQKIVKALKEYRNLHAVQHRLGSRLVYPESLKFLPLYGLAITKSTPLLGGPADTSLDERCAAGFTMMALPVKKLLKLLYPNLFRVDEWLLKPSAAHDDFKDVLRRLPLAAESLDSRGLYIYDDGFRLVLWFGRMLSPDIAKNLLGVDFAADLSRVTFQEQENGMSKKLMRLVKKLRESDPSYHPMCFLVRQGEQPREGFLLLRNLIEDQMGGSSGYVDWILQLHRQVQQN