Information report for AT3G06930
Gene Details
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Functional Descriptions
- PO:0000034 — vascular system — sistema vascular (Spanish, exact), vasculature (exact), 維管束系 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0009049 — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)
- PO:0020147 — root apical meristem — RAM (exact), meristema apical de la raíz (Spanish, exact), 根端分裂組織 (Japanese, exact), promeristem (broad)
- PO:0020148 — shoot apical meristem — SAM (exact), meristema apical del epiblasto (epiblastema) (Spanish, exact), 茎頂分裂組織 (Japanese, exact), primary shoot meristem (related), promeristem (broad)
- SALK_097442c — atprmt4b-1 mutants do not have any obvious phenotypic defects when compared to wild-type plants. But, the double mutants atprmt4a-1 atprmt4b-1 and atprmt4a-2 atprmt4b-1 have delayed flowering under long days.
- atprmt4a-2 atprmt4b-1 — These double mutants have delayed flowering compared to wild type plants when grown under long day conditions. Analysis of growth under short day conditions indicates that these mutants are not disrupted in the photoperiod pathway. These double mutants also seem to be able to respond to vernalization signals and to gibberellin. But they have an impaired autonomous pathway to flowering. FLC transcripts are up-regulated in these double mutants through an unknown mechanism. The global level of asymmetric dimethylation of arginine 17 in histone 3 (H3)is reduced in these mutants. The transcript levels for several repressors of FLC do not seem to be altered in the double mutants, nor are there discernible changes in several types of H3 modifications at the FLC locus.
Functional Keywords
Literature and News
- Redundant requirement for a pair of PROTEIN ARGININE METHYLTRANSFERASE4 homologs for the proper regulation of Arabidopsis flowering time. DOI: 10.1104/pp.108.124727 ; PMID: 18660432
- PARAQUAT TOLERANCE3 Is an E3 Ligase That Switches off Activated Oxidative Response by Targeting Histone-Modifying PROTEIN METHYLTRANSFERASE4b. DOI: 10.1371/journal.pgen.1006332 ; PMID: 27676073
- PRMT6 physically associates with nuclear factor Y to regulate photoperiodic flowering in Arabidopsis. DOI: 10.1007/s42994-021-00065-y ; PMID: 36304422
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VEK8
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VEK8
- EnsemblPlants: AT3G06930.1
- Gramene: AT3G06930.1
- Orthologous matrix: CMVEGSD
- ExpressionAtlas: AT3G06930
- InterPro: IPR025799, IPR029063, IPR055135
- PANTHER: PTHR11006, PTHR11006:SF10
- SUPFAM: SSF53335
- PROSITE: PS51678
- Gene3D: 2.70.160.11, 3.40.50.150
- OrthoDB: A0A178VEK8
- SWISS-MODEL: A0A178VEK8
- Conserved Domain Database: cd02440
Homologs
- Brassica napus BnaA02G0364800ZS, BnaC02G0489900ZS, BnaC07G0333600ZS
- Brassica oleracea Bo2g150420, Bo7g089780
- Brassica rapa Bra020667, Bra037440
- Glycine max Glyma.17G026500
- Gossypium hirsutum Gohir.A09G239000, Gohir.A09G062500, Gohir.D09G239900
- Juglans regia Jr12_11180, Jr07_18690
- Manihot esculenta MANES_03G195300
- Populus trichocarpa POPTR_010G014600v3
- Prunus persica PRUPE_1G136600
Sequences
cDNA Sequence
- >AT3G06930.1
TTACTCCTTTTGGCGGCTTTAACTCTTCTCCCTCTCAGAGAGTTCGGAAACTCTCAGCAGAAAAACCCTAAAATTCTTAAGCTTCGTTTACACACACATACAGAGACTGTATCTGTACATTCGCATCGTTTTGTAAAAATGGAGGTATCTTCTGTGAAAAAGCTTGAGCAGCTGGAGTACTCTTTAGAGTCAGTCACTGATCTCTCTTCGTCTTCCGTTTCGTCGTCCTCTCCAGCTGTAGCTACGTTTTCCTACGTTGATGGAGTCACGGAGCTCCGATTTCTGCAATCGGATTCGACCCATTGTTTCAATTTTGATCTCGCTTCCGCTCAGTTATTCAAGTTGGGGCCAGTCCATTTCATCTGTGTATCTGATGGTTCAAGTTCTTCAGAGGAGAAATCATTCTCCAAAGGAGTCAATATAAAATTCAAAAATGAGAAGGATAGCAAGGATTTTTGTGAGTCCTTTGAAGAGTGGAGAAATGATTCTGTTGTTCAAGGATCATCCTTGCAAAATGGAACAGTTTCAGCTAATAAAAGCAAGTTCGACAATAAGATAGAGGCGTCATCGGCAAAAATGTATTTTCATTATTATGGACAACTTCTACATCAGCAAAATATGCTACAAGATTATGTGCGGACAGGTACGTACTATGCCGCAGTCATGGAGAATCATTCAGATTTTGCTGGTCGTGTTGTGGTCGATGTGGGTGCTGGGAGTGGCATTTTGTCAATGTTTGCGGCCCAGGCTGGTGCCAAACATGTGTATGCGGTTGAAGCATCAGAAATGGCTGAGTATGCTCGTAAGCTGATTGCTGGAAACCCATTATTCGCTGACCGAATCACAGTCATCAAGGGTAAAGTTGAGGATATCGAGTTGCCTGAGAAAGCAGATATTTTGATTTCTGAACCGATGGGCACCTTATTGGTCAACGAGAGAATGTTAGAATCGTATGTAATTGCTAGGGATCGTTTTATGACTCCAAAAGGCAAAATGTTTCCCACTGTCGGAAGGATTCACATGGCACCTTTTTCTGATGAATTCTTATTTATTGAGATGGCAAATAAGGCTATGTTTTGGCAACAGCAGAACTATTATGGAGTTGATCTGACACCTCTATATGGATCAGCGCACCAAGGTTATTTTTCTCAGCCCGTGGTTGATGCATTTGATCCGAGATTATTAGTGGCTTCTCCGATGTTCCACATGATAGATTTCACTCAAATGAAGGAAGAAGATTTTTACGAGATTGATATCCCGTTGAAGTTCACTGCTTCCATGTGCACCAGAATGCATGGACTTGCCTGCTGGTTTGACGTTCTCTTTGACGGGAGCACGGTCCAAAGATGGCTCACAACTGCTCCCGGTGCACCTACAACGCATTGGTACCAAATCAGATGTGTTCTCTCGCAGCCTATTTACGTAATGGCAGGTCAAGAGATCACTGGTAGACTTCATTTGATAGCCCACAGTGCTCAGAGTTACACCATAGATCTAACTTTATCAGCTAAAATGTGGGGGCCCGGTGCAAGTCAAGGCGGAATTCTCCAATCATCGACATGCAAATTCGATCTGAAAGAACCTTATTATAGAATGTCTCAGCCACAAGCATACCCTGTTGCACAAGAACCACCTCTACAACCACAACCAGAGCTAAGTACACAGGACATACAAACACCAAACGATGAATTAGAAGAAGAGTTACTGCAACAATTGCCACAGAACCCAAGTGCCCAGCTCTAAAAGCTAATAAGTGAAATGAAGGTGAGAGATGATAATTGGGATCTTTGAATCTCAGTCATATTTTGAGCTTGGGATTTCTGTTTGTAACGTCAAAAAGGTAAAAAAAATGTTTCTGGTGTCTTTATGAGTTTTGGTATGGAAAGATCAAAATGATGAGCATGGAAAGATCTTATCATTCCCATTGCTTCCATGGAAAAGTCTCTGCTTCTTTGTGTATTTCTTTTCACACCCAACTTATCAATTATTTACGTTATCTTTAAAAGCCACACGCAATGTAAACAATGAATCAAGAATCGAGTTCATTTATCAGAAAAACATGTCTTTCTAAATTGAGTTCTAT - >AT3G06930.2
TTACTCCTTTTGGCGGCTTTAACTCTTCTCCCTCTCAGAGAGTTCGGAAACTCTCAGCAGAAAAACCCTAAAATTCTTAAGCTTCGTTTACACACACATACAGAGACTGTATCTGTACATTCGCATCGTTTTGTAAAAATGGAGGTATCTTCTGTGAAAAAGCTTGAGCAGCTGGAGTACTCTTTAGAGTCAGTCACTGATCTCTCTTCGTCTTCCGTTTCGTCGTCCTCTCCAGCTGTAGCTACGTTTTCCTACGTTGATGGAGTCACGGAGCTCCGATTTCTGCAATCGGATTCGACCCATTGTTTCAATTTTGATCTCGCTTCCGCTCAGTTATTCAAGTTGGGGCCAGTCCATTTCATCTGTGTATCTGATGGTTCAAGTTCTTCAGAGGAGAAATCATTCTCCAAAGGAGTCAATATAAAATTCAAAAATGAGAAGGATAGCAAGGATTTTTGTGAGTCCTTTGAAGAGTGGAGAAATGATTCTGTTGTTCAAGGATCATCCTTGCAAAATGGAACAGTTTCAGCTAATAAAAGCAAGTTCGACAATAAGATAGAGGCGTCATCGGCAAAAATGTATTTTCATTATTATGGACAACTTCTACATCAGCAAAATATGCTACAAGATTATGTGCGGACAGGTACGTACTATGCCGCAGTCATGGAGAATCATTCAGATTTTGCTGGTCGTGTTGTGGTCGATGTGGGTGCTGGGAGTGGCATTTTGTCAATGTTTGCGGCCCAGGCTGGTGCCAAACATGTGTATGCGGTTGAAGCATCAGAAATGGCTGAGTATGCTCGTAAGCTGATTGCTGGAAACCCATTATTCGCTGACCGAATCACAGTCATCAAGGGTAAAGTTGAGGATATCGAGTTGCCTGAGAAAGCAGATATTTTGATTTCTGAACCGATGGGCACCTTATTGGTCAACGAGAGAATGTTAGAATCGTATGTAATTGCTAGGGATCGTTTTATGACTCCAAAAGGCAAAATGTTTCCCACTGTCGGAAGGATTCACATGGCACCTTTTTCTGATGAATTCTTATTTATTGAGATGGCAAATAAGGCTATGTTTTGGCAACAGCAGAACTATTATGGAGTTGATCTGACACCTCTATATGGATCAGCGCACCAAGGTTATTTTTCTCAGCCCGTGGTTGATGCATTTGATCCGAGATTATTAGTGGCTTCTCCGATGTTCCACATGATAGATTTCACTCAAATGAAGGAAGAAGATTTTTACGAGATTGATATCCCGTTGAAGTTCACTGCTTCCATGTGCACCAGAATGCATGGACTTGCCTGCTGGTTTGACGTTCTCTTTGACGGGAGCACGGTCCAAAGATGGCTCACAACTGCTCCCGGTGCACCTACAACGCATTGGTACCAAATCAGATGTGTTCTCTCGCAGCCTATTTACGTAATGGCAGGTCAAGAGATCACTGGTAGACTTCATTTGATAGCCCACAGTGCTCAGAGTTACACCATAGATCTAACTTTATCAGCTAAAATGTGGGGGCCCGGTGCAAGTCAAGGCGGAATTCTCCAATCATCGACATGCAAATTCGATCTGAAAGAACCTTATTATAGAATGTCTCAGCCACAAGCATACCCTGTTGCACAAGAACCACCTCTACAACCACAACCAGAGCTAAGTACACAGGACATACAAACACCAAACGATGAATTAGAAGAAGAGTTACTGCAACAATTGCCACAGAACCCAAGTGCCCAGCTCTAAAAGCTAATAAGTGAAATGAAGGTGAGAGATGATAATTGGGATCTTTGAATCTCAGTCATATTTTGAGCTTGGGATTTCTGTTTGTAACGTCAAAAAGGTAAAAAAAATGTTTCTGGTGTCTTTATGAGTTTTGGTATGGAAAGATCAAAATGATGAGCATGGAAAGATCTTATCATTCCCATTGCTTCCATGGAAAAGTCTCTGCTTCTTTGTGTATTTCTTTTCACACCCAACTTATCAATTATTTACGTTATCTTTAAAAGCCACACGCAATGTAAACAATGAATCAAGAATCGAGTTCATTTATCAGAAAAACATGTCTTTCTAAATTGAGTTCTAT
CDS Sequence
- >AT3G06930.1
ATGGAGGTATCTTCTGTGAAAAAGCTTGAGCAGCTGGAGTACTCTTTAGAGTCAGTCACTGATCTCTCTTCGTCTTCCGTTTCGTCGTCCTCTCCAGCTGTAGCTACGTTTTCCTACGTTGATGGAGTCACGGAGCTCCGATTTCTGCAATCGGATTCGACCCATTGTTTCAATTTTGATCTCGCTTCCGCTCAGTTATTCAAGTTGGGGCCAGTCCATTTCATCTGTGTATCTGATGGTTCAAGTTCTTCAGAGGAGAAATCATTCTCCAAAGGAGTCAATATAAAATTCAAAAATGAGAAGGATAGCAAGGATTTTTGTGAGTCCTTTGAAGAGTGGAGAAATGATTCTGTTGTTCAAGGATCATCCTTGCAAAATGGAACAGTTTCAGCTAATAAAAGCAAGTTCGACAATAAGATAGAGGCGTCATCGGCAAAAATGTATTTTCATTATTATGGACAACTTCTACATCAGCAAAATATGCTACAAGATTATGTGCGGACAGGTACGTACTATGCCGCAGTCATGGAGAATCATTCAGATTTTGCTGGTCGTGTTGTGGTCGATGTGGGTGCTGGGAGTGGCATTTTGTCAATGTTTGCGGCCCAGGCTGGTGCCAAACATGTGTATGCGGTTGAAGCATCAGAAATGGCTGAGTATGCTCGTAAGCTGATTGCTGGAAACCCATTATTCGCTGACCGAATCACAGTCATCAAGGGTAAAGTTGAGGATATCGAGTTGCCTGAGAAAGCAGATATTTTGATTTCTGAACCGATGGGCACCTTATTGGTCAACGAGAGAATGTTAGAATCGTATGTAATTGCTAGGGATCGTTTTATGACTCCAAAAGGCAAAATGTTTCCCACTGTCGGAAGGATTCACATGGCACCTTTTTCTGATGAATTCTTATTTATTGAGATGGCAAATAAGGCTATGTTTTGGCAACAGCAGAACTATTATGGAGTTGATCTGACACCTCTATATGGATCAGCGCACCAAGGTTATTTTTCTCAGCCCGTGGTTGATGCATTTGATCCGAGATTATTAGTGGCTTCTCCGATGTTCCACATGATAGATTTCACTCAAATGAAGGAAGAAGATTTTTACGAGATTGATATCCCGTTGAAGTTCACTGCTTCCATGTGCACCAGAATGCATGGACTTGCCTGCTGGTTTGACGTTCTCTTTGACGGGAGCACGGTCCAAAGATGGCTCACAACTGCTCCCGGTGCACCTACAACGCATTGGTACCAAATCAGATGTGTTCTCTCGCAGCCTATTTACGTAATGGCAGGTCAAGAGATCACTGGTAGACTTCATTTGATAGCCCACAGTGCTCAGAGTTACACCATAGATCTAACTTTATCAGCTAAAATGTGGGGGCCCGGTGCAAGTCAAGGCGGAATTCTCCAATCATCGACATGCAAATTCGATCTGAAAGAACCTTATTATAGAATGTCTCAGCCACAAGCATACCCTGTTGCACAAGAACCACCTCTACAACCACAACCAGAGCTAAGTACACAGGACATACAAACACCAAACGATGAATTAGAAGAAGAGTTACTGCAACAATTGCCACAGAACCCAAGTGCCCAGCTCTAA - >AT3G06930.2
ATGGAGGTATCTTCTGTGAAAAAGCTTGAGCAGCTGGAGTACTCTTTAGAGTCAGTCACTGATCTCTCTTCGTCTTCCGTTTCGTCGTCCTCTCCAGCTGTAGCTACGTTTTCCTACGTTGATGGAGTCACGGAGCTCCGATTTCTGCAATCGGATTCGACCCATTGTTTCAATTTTGATCTCGCTTCCGCTCAGTTATTCAAGTTGGGGCCAGTCCATTTCATCTGTGTATCTGATGGTTCAAGTTCTTCAGAGGAGAAATCATTCTCCAAAGGAGTCAATATAAAATTCAAAAATGAGAAGGATAGCAAGGATTTTTGTGAGTCCTTTGAAGAGTGGAGAAATGATTCTGTTGTTCAAGGATCATCCTTGCAAAATGGAACAGTTTCAGCTAATAAAAGCAAGTTCGACAATAAGATAGAGGCGTCATCGGCAAAAATGTATTTTCATTATTATGGACAACTTCTACATCAGCAAAATATGCTACAAGATTATGTGCGGACAGGTACGTACTATGCCGCAGTCATGGAGAATCATTCAGATTTTGCTGGTCGTGTTGTGGTCGATGTGGGTGCTGGGAGTGGCATTTTGTCAATGTTTGCGGCCCAGGCTGGTGCCAAACATGTGTATGCGGTTGAAGCATCAGAAATGGCTGAGTATGCTCGTAAGCTGATTGCTGGAAACCCATTATTCGCTGACCGAATCACAGTCATCAAGGGTAAAGTTGAGGATATCGAGTTGCCTGAGAAAGCAGATATTTTGATTTCTGAACCGATGGGCACCTTATTGGTCAACGAGAGAATGTTAGAATCGTATGTAATTGCTAGGGATCGTTTTATGACTCCAAAAGGCAAAATGTTTCCCACTGTCGGAAGGATTCACATGGCACCTTTTTCTGATGAATTCTTATTTATTGAGATGGCAAATAAGGCTATGTTTTGGCAACAGCAGAACTATTATGGAGTTGATCTGACACCTCTATATGGATCAGCGCACCAAGGTTATTTTTCTCAGCCCGTGGTTGATGCATTTGATCCGAGATTATTAGTGGCTTCTCCGATGTTCCACATGATAGATTTCACTCAAATGAAGGAAGAAGATTTTTACGAGATTGATATCCCGTTGAAGTTCACTGCTTCCATGTGCACCAGAATGCATGGACTTGCCTGCTGGTTTGACGTTCTCTTTGACGGGAGCACGGTCCAAAGATGGCTCACAACTGCTCCCGGTGCACCTACAACGCATTGGTACCAAATCAGATGTGTTCTCTCGCAGCCTATTTACGTAATGGCAGGTCAAGAGATCACTGGTAGACTTCATTTGATAGCCCACAGTGCTCAGAGTTACACCATAGATCTAACTTTATCAGCTAAAATGTGGGGGCCCGGTGCAAGTCAAGGCGGAATTCTCCAATCATCGACATGCAAATTCGATCTGAAAGAACCTTATTATAGAATGTCTCAGCCACAAGCATACCCTGTTGCACAAGAACCACCTCTACAACCACAACCAGAGCTAAGTACACAGGACATACAAACACCAAACGATGAATTAGAAGAAGAGTTACTGCAACAATTGCCACAGAACCCAAGTGCCCAGCTCTAA
Protein Sequence
- >AT3G06930.1
MEVSSVKKLEQLEYSLESVTDLSSSSVSSSSPAVATFSYVDGVTELRFLQSDSTHCFNFDLASAQLFKLGPVHFICVSDGSSSSEEKSFSKGVNIKFKNEKDSKDFCESFEEWRNDSVVQGSSLQNGTVSANKSKFDNKIEASSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENHSDFAGRVVVDVGAGSGILSMFAAQAGAKHVYAVEASEMAEYARKLIAGNPLFADRITVIKGKVEDIELPEKADILISEPMGTLLVNERMLESYVIARDRFMTPKGKMFPTVGRIHMAPFSDEFLFIEMANKAMFWQQQNYYGVDLTPLYGSAHQGYFSQPVVDAFDPRLLVASPMFHMIDFTQMKEEDFYEIDIPLKFTASMCTRMHGLACWFDVLFDGSTVQRWLTTAPGAPTTHWYQIRCVLSQPIYVMAGQEITGRLHLIAHSAQSYTIDLTLSAKMWGPGASQGGILQSSTCKFDLKEPYYRMSQPQAYPVAQEPPLQPQPELSTQDIQTPNDELEEELLQQLPQNPSAQL - >AT3G06930.2
MEVSSVKKLEQLEYSLESVTDLSSSSVSSSSPAVATFSYVDGVTELRFLQSDSTHCFNFDLASAQLFKLGPVHFICVSDGSSSSEEKSFSKGVNIKFKNEKDSKDFCESFEEWRNDSVVQGSSLQNGTVSANKSKFDNKIEASSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENHSDFAGRVVVDVGAGSGILSMFAAQAGAKHVYAVEASEMAEYARKLIAGNPLFADRITVIKGKVEDIELPEKADILISEPMGTLLVNERMLESYVIARDRFMTPKGKMFPTVGRIHMAPFSDEFLFIEMANKAMFWQQQNYYGVDLTPLYGSAHQGYFSQPVVDAFDPRLLVASPMFHMIDFTQMKEEDFYEIDIPLKFTASMCTRMHGLACWFDVLFDGSTVQRWLTTAPGAPTTHWYQIRCVLSQPIYVMAGQEITGRLHLIAHSAQSYTIDLTLSAKMWGPGASQGGILQSSTCKFDLKEPYYRMSQPQAYPVAQEPPLQPQPELSTQDIQTPNDELEEELLQQLPQNPSAQL