Information report for AT3G06860
Gene Details
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Functional Descriptions
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- CS2105640 — Mildly sucrose dependent
- CS2105641 — Mildly sucrose dependent
- MFP2-1 — Has a sucrose-dependent seedling growth phenotype. Growth arrested 3-4 days after germination in the light, on medium without sucrose. In the dark, hypocotyl growth is significantly less than the wild type. Has less than 2% of L-3-hydroxyacyl-CoA dehydrogenase activity, and reduced 2-trans-enoyl-CoA hydratase activity towards long chain enoyl-CoAs. Accumulated 2.5-fold more long chain acyl-CoAs in 5-day-old seedlings. Has fewer but larger peroxisomes.
Functional Keywords
Literature and News
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Arabidopsis sterol carrier protein-2 is required for normal development of seeds and seedlings. DOI: 10.1093/jxb/ern201 ; PMID: 18687588
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Peroxisomal β-oxidation regulates histone acetylation and DNA methylation in Arabidopsis. DOI: 10.1073/pnas.1904143116 ; PMID: 31064880
- Metabolic Alterations in the Enoyl-CoA Hydratase 2 Mutant Disrupt Peroxisomal Pathways in Seedlings. DOI: 10.1104/pp.19.00300 ; PMID: 31138624
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Identification of two Arabidopsis genes encoding a peroxisomal oxidoreductase-like protein and an acyl-CoA synthetase-like protein that are required for responses to pro-auxins. DOI: 10.1007/s11103-008-9431-4 ; PMID: 19043666
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Gene Resources
- UniProt: Q8W4D2
- EMBL: AY062650
- AlphaFoldDB: Q8W4D2
- ExpressionAtlas: AT3G06860
- InterPro: IPR001753, IPR006176, IPR018376
- PANTHER: PTHR23309, PTHR23309:SF9
- SUPFAM: SSF51735, SSF52096
- PROSITE: PS00166
- Gene3D: 3.40.50.720, 3.90.226.10
- Conserved Domain Database: cd06558
Homologs
- Actinidia chinensis Achn032341
- Oryza sativa MFP;AIM1
Sequences
cDNA Sequence
- >AT3G06860.1
AATAACAAATAAAAATTCACATATCGAAAACATTATCAAAGTACCGTTGCTTTGAGGAGTGTGCCACTCTACCATATTATCACTGACGTCATCATCTTTTGCAATTATATAATCATCTGATTTCTCACGTCTCCTCTCTTTTTCATTAATTCCGAAAATTTTGACTCGCAAAATCTCAACGAAGCTCGAAAATGGATTCACGAACCAAGGGGAAGACGGTGATGGAAGTTGGTGGCGATGGCGTTGCCGTCATAACACTCATCAATCCTCCCGTCAATTCTCTATCCTTCGACGTGCTATACAATCTCAAAAGTAATTACGAGGAGGCCTTGAGCAGGAATGATGTTAAAGCTATTGTTATTACTGGTGCAAAGGGGAGGTTCTCTGGTGGCTTTGATATATCTGGTTTTGGTGAAATGCAGAAGGGGAATGTCAAAGAGCCAAAGGCTGGTTACATTTCGATTGACATCATAACCGACTTGCTTGAAGCTGCTAGGAAACCGTCTGTCGCTGCCATTGATGGACTTGCCTTGGGAGGAGGATTAGAACTTGCTATGGCTTGTCATGCTAGGATATCAGCTCCTGCTGCACAGTTAGGCTTGCCTGAGCTGCAACTTGGTGTTATTCCTGGTTTTGGAGGAACGCAGCGTCTCCCGCGTCTTGTTGGTCTCACCAAAGCCCTTGAAATGATTTTGACATCTAAGCCAGTTAAAGCTGAGGAAGGTCATTCTTTGGGTCTTATTGATGCTGTGGTGCCACCTGCGGAGTTAGTAACCACTGCTCGTCGCTGGGCCCTTGACATAGTCGGGAGGAGAAAACCATGGGTATCTAGTGTTTCCAAGACTGATAAGTTACCTCCTCTTGGAGAGGCAAGGGAGATACTGACGTTTGCCAAGGCACAGACACTCAAGCGTGCCCCCAATATGAAACACCCTTTAATGTGCCTTGACGCTATTGAAGTAGGTATTGTTTCTGGTCCAAGGGCTGGTTTAGAAAAGGAAGCTGAAGTCGCCTCACAAGTGGTAAAACTGGATACCACCAAAGGCTTGATCCACGTCTTCTTTTCTCAGCGAGGAACTGCTAAGGTTCCTGGAGTTACTGATCGTGGGTTGGTGCCAAGGAAGATTAAGAAGGTAGCCATAATTGGAGGCGGGTTGATGGGATCTGGAATAGCTACTGCGTTGATCCTAAGTAACTATCCAGTGATTCTCAAGGAGGTAAATGAGAAATTCCTGGAGGCTGGAATTGGCAGAGTTAAAGCTAATCTCCAGAGCCGTGTAAGGAAGGGAAGCATGTCTCAGGAAAAGTTTGAGAAAACCATGTCTCTCCTTAAGGGTTCTCTTGATTATGAAAGCTTTAGAGATGTGGACATGGTCATTGAGGCTGTTATTGAGAATATATCTTTGAAGCAACAAATTTTTGCTGATCTGGAGAAATACTGTCCTCAGCATTGTATCCTTGCTAGCAACACATCGACCATTGACTTGAACAAAATTGGGGAGCGGACCAAGTCTCAGGATCGAATTGTTGGAGCACATTTTTTCAGTCCAGCACATATCATGCCGCTACTTGAAATAGTTCGGACCAATCATACCTCTGCCCAAGTAATTGTTGACCTGTTAGATGTTGGGAAGAAGATTAAGAAAACACCAGTTGTGGTGGGAAACTGCACAGGGTTTGCAGTGAATAGGATGTTCTTCCCTTACACACAGGCAGCTATGTTCCTTGTTGAGTGTGGAGCAGATCCATATCTAATCGACAGGGCAATCAGCAAGTTTGGAATGCCAATGGGTCCCTTCAGACTGTGTGACCTGGTTGGATTTGGTGTGGCGATTGCAACCGCAACGCAGTTTATCGAGAACTTCTCAGAACGGACTTACAAATCAATGATTATTCCACTTATGCAAGAGGACAAGAGAGCTGGTGAAGCCACTCGCAAAGGTTTCTATTTGTATGATGATAAGCGCAAGGCGAAACCTGATCCTGAGCTAAAGAAATATATCGAAAAGGCAAGAAGCATATCTGGAGTAAAGCTTGACCCTAAGTTGGCGAATTTGTCGGAGAAGGACATTATTGAAATGACATTCTTCCCAGTAGTAAACGAGGCGTGTAGGGTTTTTGCTGAAGGTATCGCTGTCAAAGCAGCAGACCTTGACATTGCTGGCATAATGGGAATGGGTTTTCCACCTTACAGAGGAGGAATCATGTTCTGGGCTGATTCCATCGGATCGAAATACATTTACTCGAGGCTGGATGAGTGGTCGAAGGCTTATGGTGAATTCTTCAAGCCTTGTGCTTTTTTGGCTGAGAGGGGATCTAAAGGAGTTCTTTTGAGCGCTCCCGTGAAACAAGCCAGCTCACGGTTGTAAGGTCAGCGTTTCAGTGGAACCATTTCTCCATTGGTGCATCTTCTGTGTTTTCTTTATGTTCACATTTTACTTAGCCGGGAAGTGGGTATCTTTTGGCCTCAGAAGCTTTTAAATAAAGTCTCATCTCAGACATATGAATCTGGGAGGAAGTAGGGATTAAGTTGTAGTAGCAATAAGATTTGTTTTATGTTGTGCTTTGTCATACAACAAAGTTGTCAGATACATTTGTTGTTATAAAGCTATATGGAGTAAGTTCTATGATTTAATGATAATGTTGTCATTTGACAAATCAGTTAAAATAAATTGTGAATCAATATGGAATTAAGTATGGCAGGTTTTGATATACTG
CDS Sequence
- >AT3G06860.1
ATGGATTCACGAACCAAGGGGAAGACGGTGATGGAAGTTGGTGGCGATGGCGTTGCCGTCATAACACTCATCAATCCTCCCGTCAATTCTCTATCCTTCGACGTGCTATACAATCTCAAAAGTAATTACGAGGAGGCCTTGAGCAGGAATGATGTTAAAGCTATTGTTATTACTGGTGCAAAGGGGAGGTTCTCTGGTGGCTTTGATATATCTGGTTTTGGTGAAATGCAGAAGGGGAATGTCAAAGAGCCAAAGGCTGGTTACATTTCGATTGACATCATAACCGACTTGCTTGAAGCTGCTAGGAAACCGTCTGTCGCTGCCATTGATGGACTTGCCTTGGGAGGAGGATTAGAACTTGCTATGGCTTGTCATGCTAGGATATCAGCTCCTGCTGCACAGTTAGGCTTGCCTGAGCTGCAACTTGGTGTTATTCCTGGTTTTGGAGGAACGCAGCGTCTCCCGCGTCTTGTTGGTCTCACCAAAGCCCTTGAAATGATTTTGACATCTAAGCCAGTTAAAGCTGAGGAAGGTCATTCTTTGGGTCTTATTGATGCTGTGGTGCCACCTGCGGAGTTAGTAACCACTGCTCGTCGCTGGGCCCTTGACATAGTCGGGAGGAGAAAACCATGGGTATCTAGTGTTTCCAAGACTGATAAGTTACCTCCTCTTGGAGAGGCAAGGGAGATACTGACGTTTGCCAAGGCACAGACACTCAAGCGTGCCCCCAATATGAAACACCCTTTAATGTGCCTTGACGCTATTGAAGTAGGTATTGTTTCTGGTCCAAGGGCTGGTTTAGAAAAGGAAGCTGAAGTCGCCTCACAAGTGGTAAAACTGGATACCACCAAAGGCTTGATCCACGTCTTCTTTTCTCAGCGAGGAACTGCTAAGGTTCCTGGAGTTACTGATCGTGGGTTGGTGCCAAGGAAGATTAAGAAGGTAGCCATAATTGGAGGCGGGTTGATGGGATCTGGAATAGCTACTGCGTTGATCCTAAGTAACTATCCAGTGATTCTCAAGGAGGTAAATGAGAAATTCCTGGAGGCTGGAATTGGCAGAGTTAAAGCTAATCTCCAGAGCCGTGTAAGGAAGGGAAGCATGTCTCAGGAAAAGTTTGAGAAAACCATGTCTCTCCTTAAGGGTTCTCTTGATTATGAAAGCTTTAGAGATGTGGACATGGTCATTGAGGCTGTTATTGAGAATATATCTTTGAAGCAACAAATTTTTGCTGATCTGGAGAAATACTGTCCTCAGCATTGTATCCTTGCTAGCAACACATCGACCATTGACTTGAACAAAATTGGGGAGCGGACCAAGTCTCAGGATCGAATTGTTGGAGCACATTTTTTCAGTCCAGCACATATCATGCCGCTACTTGAAATAGTTCGGACCAATCATACCTCTGCCCAAGTAATTGTTGACCTGTTAGATGTTGGGAAGAAGATTAAGAAAACACCAGTTGTGGTGGGAAACTGCACAGGGTTTGCAGTGAATAGGATGTTCTTCCCTTACACACAGGCAGCTATGTTCCTTGTTGAGTGTGGAGCAGATCCATATCTAATCGACAGGGCAATCAGCAAGTTTGGAATGCCAATGGGTCCCTTCAGACTGTGTGACCTGGTTGGATTTGGTGTGGCGATTGCAACCGCAACGCAGTTTATCGAGAACTTCTCAGAACGGACTTACAAATCAATGATTATTCCACTTATGCAAGAGGACAAGAGAGCTGGTGAAGCCACTCGCAAAGGTTTCTATTTGTATGATGATAAGCGCAAGGCGAAACCTGATCCTGAGCTAAAGAAATATATCGAAAAGGCAAGAAGCATATCTGGAGTAAAGCTTGACCCTAAGTTGGCGAATTTGTCGGAGAAGGACATTATTGAAATGACATTCTTCCCAGTAGTAAACGAGGCGTGTAGGGTTTTTGCTGAAGGTATCGCTGTCAAAGCAGCAGACCTTGACATTGCTGGCATAATGGGAATGGGTTTTCCACCTTACAGAGGAGGAATCATGTTCTGGGCTGATTCCATCGGATCGAAATACATTTACTCGAGGCTGGATGAGTGGTCGAAGGCTTATGGTGAATTCTTCAAGCCTTGTGCTTTTTTGGCTGAGAGGGGATCTAAAGGAGTTCTTTTGAGCGCTCCCGTGAAACAAGCCAGCTCACGGTTGTAA
Protein Sequence
- >AT3G06860.1
MDSRTKGKTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGEMQKGNVKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFGVAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSAPVKQASSRL