Information report for AT3G06810
Gene Details
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Functional Descriptions
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- CS799952 — Resistant to (root elongation on) 2,4-dichlorobutyric acid and IBA
- SALK_004657 — Roots moderately resistant to elongation inhibition by 2,4-DB (2,4-Dichlorophenoxybutyric acid) but remained sensitive to inhibition by 2,4-D (2,4-Dichlorophenoxyacetic acid). Fewer lateral roots are produced without induction which becomes more pronounced in response to IBA (Indole-3-butyric acid) treatment.
- SALK_033467 — Roots moderately resistant to elongation inhibition by 2,4-DB (2,4-Dichlorophenoxybutyric acid) but remained sensitive to inhibition by 2,4-D (2,4-Dichlorophenoxyacetic acid). Fewer lateral roots are produced without induction which becomes more pronounced in response to IBA (Indole-3-butyric acid) treatment.
- ibr3-1 — Roots moderately resistant to elongation inhibition by 2,4-DB (2,4-Dichlorophenoxybutyric acid) but remained sensitive to inhibition by 2,4-D (2,4-Dichlorophenoxyacetic acid). Fewer lateral roots are produced without induction which becomes more pronounced in response to IBA (Indole-3-butyric acid) treatment.
- ibr3-11 — Roots moderately resistant to elongation inhibition by 2,4-DB (2,4-Dichlorophenoxybutyric acid) but remained sensitive to inhibition by 2,4-D (2,4-Dichlorophenoxyacetic acid). Fewer lateral roots are produced without induction which becomes more pronounced in response to IBA (Indole-3-butyric acid) treatment.
- ibr3-2 — Roots moderately resistant to elongation inhibition by 2,4-DB (2,4-Dichlorophenoxybutyric acid) but remained sensitive to inhibition by 2,4-D (2,4-Dichlorophenoxyacetic acid). Fewer lateral roots are produced without induction which becomes more pronounced in response to IBA (Indole-3-butyric acid) treatment.
Functional Keywords
Literature and News
- Transcriptome analysis of Arabidopsis colonized by a plant-growth promoting rhizobacterium reveals a general effect on disease resistance. DOI: 10.1046/j.1365-313x.2003.01867.x ; PMID: 14535883
- Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana. DOI: 10.1093/pcp/pcg173 ; PMID: 14701923
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- AraPerox. A database of putative Arabidopsis proteins from plant peroxisomes. DOI: 10.1104/pp.104.043695 ; PMID: 15333753
- Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02399.x ; PMID: 15860015
- IBR3, a novel peroxisomal acyl-CoA dehydrogenase-like protein required for indole-3-butyric acid response. DOI: 10.1007/s11103-007-9134-2 ; PMID: 17277896
- Peroxisomal metabolism of propionic acid and isobutyric acid in plants. DOI: 10.1074/jbc.M701028200 ; PMID: 17580301
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Identification and characterization of Arabidopsis indole-3-butyric acid response mutants defective in novel peroxisomal enzymes. DOI: 10.1534/genetics.108.090399 ; PMID: 18725356
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. DOI: 10.1104/pp.108.129999 ; PMID: 18931141
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants. DOI: 10.1016/j.cell.2014.01.039 ; PMID: 24529374
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Identification of two Arabidopsis genes encoding a peroxisomal oxidoreductase-like protein and an acyl-CoA synthetase-like protein that are required for responses to pro-auxins. DOI: 10.1007/s11103-008-9431-4 ; PMID: 19043666
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Gene Resources
- UniProt: A0A654FFE9
- EMBL: CACRSJ010000106, CACSHJ010000089
- AlphaFoldDB: A0A654FFE9
- EnsemblPlants: AT3G06810.1
- Gramene: AT3G06810.1
- KEGG: ath:AT3G06810
- Orthologous matrix: AIAMIKI
- ExpressionAtlas: AT3G06810
- InterPro: IPR002575, IPR006091, IPR009075
- PANTHER: PTHR48083, PTHR48083:SF13
- SUPFAM: SSF47203, SSF56112, SSF56645
- Gene3D: 1.10.540.10, 1.20.140.10, 2.40.110.10
- OrthoDB: A0A654FFE9
- SWISS-MODEL: A0A654FFE9
- Conserved Domain Database: cd01155, cd05154
Homologs
- Brassica oleracea Bo3g129870
Sequences
cDNA Sequence
- >AT3G06810.1
ATCACAATGACGATAATAACGATGATTATCAAAATCAAAATGGTTACTGTATTTACTATTTATAAAAAAAGAAAACATAGAATTATCTCTCCAAAAATAAGAAAAGTAGATAAACATTTCTGAAATTGCTGTAAGGTCAAAAGTAAAAAGAAAATTATCCAAAAGAAAGGTTATGCGACTTTCCGTAAATGGAATTGTTGGTATGAATGCGTGTATTTGTGTTTTAGAGAGCTATTCTTGTTGATGAATCTCTGAGGAGCAGAGCGAGATAGAGGAGAGTGAAGGAACATCATGGGAAGCAGCACGGGCGATCTTGTGACACGTATCCAATCAGCTCACCGTTTCGATCACGATGCCTTGTTTCGTTTTGCCGCCGACAACGTCTCTGGCTTTCCGACCAACCCTTCCCAATTCAAAGTCTCACAGTTCGGACATGGGCAGTCGAATCCAACGTTTCTGATAGAGGTTGGCTCAGGGAGTTCCTTGAAACGATACGTTTTGAGGAAGAAGCCTCCTGGCAAGCTTCTTCAATCTGCTCATGCTGTTGATCGAGAGTTTCAGGTGCTTCGGGCTTTAGGTGAACATACACAGGTTCCTGTTCCTAAAGTCTTCTGCTTATGCACTGACCCTGCTGTCATTGGGACTGCTTTTTACATTATGGAGTTTATGGAAGGACGTATTTTCATTGATCCAAAGTTGCCGAATGTAGCACCTGAAAGGAGAAATGCGATCTATCGTGCAACCGCCAAAGCCTTGGCATCTCTTCACTCTGCTGATGTGGATGCCATTGGTCTTGAGAAATATGGTCGGCGAGGCAATTACTGCAAAAGACAGATAGATAGGTGGTTCAAACAATATTTGGCTTCAACAAGTGAAGGTAAACCTGAAAGGAATCCAAAGATGTTTGAGCTTGTTGATTGGTTACGCAAAAACATCCCCGCGGAAGATTCAACTGGAGCAACATCAGGCCTTGTCCATGGAGACTTTCGCATTGACAATCTCGTTTTTCATCCTTCTGAGGATCGAGTTATTGGAATAATTGACTGGGAATTGTCCACGCTTGGGAACCAAATGTGTGATGTTGCATACAGCTGCATGCATTACATTGTGAATGTTCAGCTCGATAAGGAGCATGTTAGTGAAGGTTTTGAAACTACTGGGCTTCCAGAAGGAATGCTTTCGATGCCAGAATTTCTCTTAGAATACTGTTCTGCATCGGGAAAACCATGGCCTGCTGCAAACTGGAAGTTCTACGTAGCGTTCTCCTTATTTCGGGCTGCTTCAATCTACACAGGGGTGTACAGTAGATGGTTAATGGGGAATGCTTCTGCCGGTGAAAGAGCGCGAAATACAGGGGTTCAAGCTAATGAGCTTGTAGAGTCTGCCTTGGGTTATATTGCACGTGAAAATGTTCTTCCAGAACACCCTCCATCTGTTCAAAGAGACGTGTCTCCGTCGTATGAAAGCCTTGTGGATGGAAGCGGGAGATTCATCCCCAACAGAAAAGTATTGGAGTTAAGGCAGAAGTTGATCAAGTTTATGGAAACTCATATCTACCCAATGGAAAACGAGTTCTCCAAACTTGCTCAATCAGATATGCGATGGACCGTTCACCCTCAGGAGGAAAAGTTAAAGGAAATGGCAAAGAGAGAAGGCCTATGGAACTTATTTGTTCCTGTAGATAGTGCTGCTAGAGCTAGAAGAGAACTGGCGGCTACCGAGAATAAACATAACCTCTCGGGCAAGTCTTTTGATCAATTGTTTGGTGAGGGCCTCACGAACCTGGAGTATGGTTACCTTTGTGAGATCATGGGTCGTTCTGTTTGGGCTCCACAGGTGTTTAACTGTGGTGCACCAGATACTGGAAACATGGAGGTGATACTGCGGTATGGTAACAAAGAACAAATTTCTGAATGGCTTATTCCGTTGCTCGAGGGAAGAATTCGTTCTGGATTTGCTATGACTGAGCCACAAGTTGCATCGTCTGATGCAACCAATATTGAATGCTCTATCCGAAGACAAGGTGATTCATACGTCATTAATGGCACAAAATGGTGGACAAGTGGAGCTATGGATCCCAGGTGCAGAGTCCTTATTCTCATGGGAAAAACTGATTTCAACGCCCCAAAACATAAGCAGCAGTCTATGATATTAGTGGACATGCGGACTCCAGGTATAAGTGTGAAGAGGCCTCTCACAGTGTTTGGTTTTGATGACGCACCTCATGGACATGCTGAAATTTCTTTTGAAAATGTGGTTGTCCCGGCGAAGAACATTCTCCTTGGAGAAGGCCGAGGATTCGAGATTGCTCAGGGTAGGTTAGGCCCTGGAAGACTGCACCATTGCATGAGACTAATAGGTGCAGCAGAGCGTGGAATGGAGCTAATGGCTCAAAGAGCTCTGAGTAGAAAAACTTTTGGGAAGTTCATTGCGCAGCACGGTTCTTTCGTCTCTGATCTTGCAAAGTTACGGGTAGAGCTAGAAGGAACCCGATTGTTGGTTCTAGAAGCTGCTGATCATCTTGATAAATTTGGAAACAAAAAAGCTCGAGGAATTCTCGCAATGGCCAAGGTTGCAGCTCCAAACATGGCATTGAAGGTACTAGACACGGCAATACAAGTTCATGGAGCAGCCGGTGTATCCTCGGACACAGTTTTAGCGCATTTGTGGGCTACAGCTAGAACACTGAGGATTGCTGATGGACCTGATGAGGTTCATCTTGGGACCATTGGCAAGTTAGAACTGCAAAGAGCTTCAAAGCTTTAAAGCGTTTTGGGATATGCGAATTCGATTCTCAGAATAAGATATCAGTTTTTTTTTTTTACATCATTAATAAAGTTGTTCTTGGGTCTTTTAGTACAAACAGTAAATCTGAATAAATTTACTACTAGATCTTATCTGTTTCATAATGTTAATACTTTATAATATTAAATCTTACTACGAAAACGTATCTTAAACTAAAG
CDS Sequence
- >AT3G06810.1
ATGGGAAGCAGCACGGGCGATCTTGTGACACGTATCCAATCAGCTCACCGTTTCGATCACGATGCCTTGTTTCGTTTTGCCGCCGACAACGTCTCTGGCTTTCCGACCAACCCTTCCCAATTCAAAGTCTCACAGTTCGGACATGGGCAGTCGAATCCAACGTTTCTGATAGAGGTTGGCTCAGGGAGTTCCTTGAAACGATACGTTTTGAGGAAGAAGCCTCCTGGCAAGCTTCTTCAATCTGCTCATGCTGTTGATCGAGAGTTTCAGGTGCTTCGGGCTTTAGGTGAACATACACAGGTTCCTGTTCCTAAAGTCTTCTGCTTATGCACTGACCCTGCTGTCATTGGGACTGCTTTTTACATTATGGAGTTTATGGAAGGACGTATTTTCATTGATCCAAAGTTGCCGAATGTAGCACCTGAAAGGAGAAATGCGATCTATCGTGCAACCGCCAAAGCCTTGGCATCTCTTCACTCTGCTGATGTGGATGCCATTGGTCTTGAGAAATATGGTCGGCGAGGCAATTACTGCAAAAGACAGATAGATAGGTGGTTCAAACAATATTTGGCTTCAACAAGTGAAGGTAAACCTGAAAGGAATCCAAAGATGTTTGAGCTTGTTGATTGGTTACGCAAAAACATCCCCGCGGAAGATTCAACTGGAGCAACATCAGGCCTTGTCCATGGAGACTTTCGCATTGACAATCTCGTTTTTCATCCTTCTGAGGATCGAGTTATTGGAATAATTGACTGGGAATTGTCCACGCTTGGGAACCAAATGTGTGATGTTGCATACAGCTGCATGCATTACATTGTGAATGTTCAGCTCGATAAGGAGCATGTTAGTGAAGGTTTTGAAACTACTGGGCTTCCAGAAGGAATGCTTTCGATGCCAGAATTTCTCTTAGAATACTGTTCTGCATCGGGAAAACCATGGCCTGCTGCAAACTGGAAGTTCTACGTAGCGTTCTCCTTATTTCGGGCTGCTTCAATCTACACAGGGGTGTACAGTAGATGGTTAATGGGGAATGCTTCTGCCGGTGAAAGAGCGCGAAATACAGGGGTTCAAGCTAATGAGCTTGTAGAGTCTGCCTTGGGTTATATTGCACGTGAAAATGTTCTTCCAGAACACCCTCCATCTGTTCAAAGAGACGTGTCTCCGTCGTATGAAAGCCTTGTGGATGGAAGCGGGAGATTCATCCCCAACAGAAAAGTATTGGAGTTAAGGCAGAAGTTGATCAAGTTTATGGAAACTCATATCTACCCAATGGAAAACGAGTTCTCCAAACTTGCTCAATCAGATATGCGATGGACCGTTCACCCTCAGGAGGAAAAGTTAAAGGAAATGGCAAAGAGAGAAGGCCTATGGAACTTATTTGTTCCTGTAGATAGTGCTGCTAGAGCTAGAAGAGAACTGGCGGCTACCGAGAATAAACATAACCTCTCGGGCAAGTCTTTTGATCAATTGTTTGGTGAGGGCCTCACGAACCTGGAGTATGGTTACCTTTGTGAGATCATGGGTCGTTCTGTTTGGGCTCCACAGGTGTTTAACTGTGGTGCACCAGATACTGGAAACATGGAGGTGATACTGCGGTATGGTAACAAAGAACAAATTTCTGAATGGCTTATTCCGTTGCTCGAGGGAAGAATTCGTTCTGGATTTGCTATGACTGAGCCACAAGTTGCATCGTCTGATGCAACCAATATTGAATGCTCTATCCGAAGACAAGGTGATTCATACGTCATTAATGGCACAAAATGGTGGACAAGTGGAGCTATGGATCCCAGGTGCAGAGTCCTTATTCTCATGGGAAAAACTGATTTCAACGCCCCAAAACATAAGCAGCAGTCTATGATATTAGTGGACATGCGGACTCCAGGTATAAGTGTGAAGAGGCCTCTCACAGTGTTTGGTTTTGATGACGCACCTCATGGACATGCTGAAATTTCTTTTGAAAATGTGGTTGTCCCGGCGAAGAACATTCTCCTTGGAGAAGGCCGAGGATTCGAGATTGCTCAGGGTAGGTTAGGCCCTGGAAGACTGCACCATTGCATGAGACTAATAGGTGCAGCAGAGCGTGGAATGGAGCTAATGGCTCAAAGAGCTCTGAGTAGAAAAACTTTTGGGAAGTTCATTGCGCAGCACGGTTCTTTCGTCTCTGATCTTGCAAAGTTACGGGTAGAGCTAGAAGGAACCCGATTGTTGGTTCTAGAAGCTGCTGATCATCTTGATAAATTTGGAAACAAAAAAGCTCGAGGAATTCTCGCAATGGCCAAGGTTGCAGCTCCAAACATGGCATTGAAGGTACTAGACACGGCAATACAAGTTCATGGAGCAGCCGGTGTATCCTCGGACACAGTTTTAGCGCATTTGTGGGCTACAGCTAGAACACTGAGGATTGCTGATGGACCTGATGAGGTTCATCTTGGGACCATTGGCAAGTTAGAACTGCAAAGAGCTTCAAAGCTTTAA
Protein Sequence
- >AT3G06810.1
MGSSTGDLVTRIQSAHRFDHDALFRFAADNVSGFPTNPSQFKVSQFGHGQSNPTFLIEVGSGSSLKRYVLRKKPPGKLLQSAHAVDREFQVLRALGEHTQVPVPKVFCLCTDPAVIGTAFYIMEFMEGRIFIDPKLPNVAPERRNAIYRATAKALASLHSADVDAIGLEKYGRRGNYCKRQIDRWFKQYLASTSEGKPERNPKMFELVDWLRKNIPAEDSTGATSGLVHGDFRIDNLVFHPSEDRVIGIIDWELSTLGNQMCDVAYSCMHYIVNVQLDKEHVSEGFETTGLPEGMLSMPEFLLEYCSASGKPWPAANWKFYVAFSLFRAASIYTGVYSRWLMGNASAGERARNTGVQANELVESALGYIARENVLPEHPPSVQRDVSPSYESLVDGSGRFIPNRKVLELRQKLIKFMETHIYPMENEFSKLAQSDMRWTVHPQEEKLKEMAKREGLWNLFVPVDSAARARRELAATENKHNLSGKSFDQLFGEGLTNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVILRYGNKEQISEWLIPLLEGRIRSGFAMTEPQVASSDATNIECSIRRQGDSYVINGTKWWTSGAMDPRCRVLILMGKTDFNAPKHKQQSMILVDMRTPGISVKRPLTVFGFDDAPHGHAEISFENVVVPAKNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMELMAQRALSRKTFGKFIAQHGSFVSDLAKLRVELEGTRLLVLEAADHLDKFGNKKARGILAMAKVAAPNMALKVLDTAIQVHGAAGVSSDTVLAHLWATARTLRIADGPDEVHLGTIGKLELQRASKL