Information report for AT3G06490
Gene Details
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Functional Descriptions
- bos1 — Mis-regulated cell death development.
- bos1 era1-2 — Larger lesion sizes after Botrytis infection as compared to era1-2. Spontaneous cell death during flowering.
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The R2R3-MYB gene family in Arabidopsis thaliana. DOI: 10.1016/s1369-5266(00)00199-0 ; PMID: 11597504
- The BOTRYTIS SUSCEPTIBLE1 gene encodes an R2R3MYB transcription factor protein that is required for biotic and abiotic stress responses in Arabidopsis. DOI: 10.1105/tpc.014167 ; PMID: 14555693
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- Genome-wide transcriptional analysis of the Arabidopsis thaliana interaction with the plant pathogen Pseudomonas syringae pv. tomato DC3000 and the human pathogen Escherichia coli O157:H7. DOI: 10.1111/j.1365-313X.2006.02725.x ; PMID: 16553894
- Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance. DOI: 10.1111/j.1365-313X.2006.02672.x ; PMID: 16553893
- Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling. DOI: 10.1111/j.1365-313X.2006.02756.x ; PMID: 16805732
- The Arabidopsis Botrytis Susceptible1 Interactor defines a subclass of RING E3 ligases that regulate pathogen and stress responses. DOI: 10.1104/pp.110.163915 ; PMID: 20921156
- Regulation of ABA dependent wound induced spreading cell death by MYB108. DOI: 10.1111/nph.12456 ; PMID: 23952703
- Promoter-based integration in plant defense regulation. DOI: 10.1104/pp.114.248716 ; PMID: 25352272
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. DOI: 10.1105/tpc.15.00744 ; PMID: 27650334
- Screening Arabidopsis mutants in genes useful for phytoremediation. DOI: 10.1016/j.jhazmat.2017.04.021 ; PMID: 28441590
- AUXIN RESPONSE FACTOR17 Directly Regulates MYB108 for Anther Dehiscence. DOI: 10.1104/pp.19.00576 ; PMID: 31345954
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- Knockdown of the DUF647 family member RUS4 impairs stamen development and pollen maturation in Arabidopsis. DOI: 10.1016/j.plantsci.2020.110645 ; PMID: 33218621
- Combined Abiotic Stresses Repress Defense and Cell Wall Metabolic Genes and Render Plants More Susceptible to Pathogen Infection. DOI: 10.3390/plants10091946 ; PMID: 34579478
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
Gene Resources
- UniProt: A0A178V5C1
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178V5C1
- EnsemblPlants: AT3G06490.1
- Gramene: AT3G06490.1
- KEGG: ath:AT3G06490
- Orthologous matrix: LNWFEDI
- ExpressionAtlas: AT3G06490
- InterPro: IPR001005, IPR009057, IPR017930
- PANTHER: PTHR45675, PTHR45675:SF45
- SUPFAM: SSF46689
- PROSITE: PS50090, PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A178V5C1
- SWISS-MODEL: A0A178V5C1
- Conserved Domain Database: cd00167
Homologs
- Brassica napus GSBRNA2T00108589001, GSBRNA2T00057532001, GSBRNA2T00120095001, GSBRNA2T00027069001
- Brassica oleracea XP_013584371.1, XP_013584557.1, XP_013623662.1
- Brassica rapa XP_009124852.1, XP_009147158.1, XP_009134903.1, XP_009134904.1
- Raphanus raphanistrum RrC6693_p1
Sequences
cDNA Sequence
- >AT3G06490.1
AATACCACCGAAGATTTATTGCTGGTCGCGTTTTTTATTACTAAATTTGATGTTTTATGTTTACACTTTGACTGTTTGCCAACCAAAAAAAAAAAAAAAAAAATTTTTTTTTTCACCTTCACGAATTCTAAAACTTTGAAGAGCTTATAAACAGAATTTAAGAGTACAAAATTATAAAAAAAATTAAATCAATAAACATACAGTTCCTGCTGCCAAAAAATAAAAATAAAAAATAAACATACAGTTCCTATATTACGGCTGTCTATTCCCTTCATCGCACATGTTCCAAATAATTTTAAAAAATAAAAAGAAAAATTGAAAACTATCTTCTTTTTTCTTCTATAAAACCCACAACTTCTCTTTTTCTTGTGCATTCAAAACTCATCCTATCTCTATCTACACATAACTCCAAAAAACAAACAAATTTTCTCTCTCTATCTCTCTTCGCAAAACAACATAGAAAAAAAGTAGAAAGTCTCAATCTTTTTGCTGAACAATCTTGTTGTGGTCTCTTCTGTGTATATCAATGGATGAAAAAGGAAGAAGCTTGAAGAACAACAACATGGAAGACGAGATGGACCTAAAGAGAGGTCCGTGGACTGCTGAAGAAGATTTTAAGCTCATGAATTACATTGCTACTAATGGAGAAGGTCGCTGGAACTCTCTTTCTCGTTGCGCCGGCCTCCAACGCACCGGTAAAAGCTGTAGACTAAGGTGGTTAAACTATCTCCGCCCTGACGTCCGCCGTGGAAACATTACACTTGAAGAACAACTCTTGATCCTCGAACTTCATTCCCGTTGGGGAAATAGATGGTCAAAAATCGCACAATATTTACCGGGAAGAACGGACAACGAGATCAAGAACTACTGGAGGACGCGGGTGCAAAAGCATGCGAAACAGTTGAAATGTGATGTGAATAGCCAACAATTCAAAGACACAATGAAGTACTTGTGGATGCCTCGACTAGTCGAGAGGATTCAGTCAGCCTCGGCCTCATCCGCAGCAGCAGCCACCACCACAACCACCACCACCACAGGATCAGCCGGCACGTCATCTTGCATCACAACCTCTAACAATCAATTCATGAATTACGACTACAACAACAACAACATGGGACAACAGTTTGGTGTAATGAGCAACAATGATTATATCACGCCTGAAAATTCCAGCGTGGCAGTGTCTCCGGCGTCAGACTTAACGGAGTACTACAGCGCTCCAAACCCTAACCCGGAATACTATTCGGGTCAAATGGGGAATAGTTATTATCCAGATCAGAATTTAGTGAGTTCACAATTATTACCGGATAATTATTTCGACTATAGTGGATTATTAGACGAAGATCTAACGGCTATGCAAGAGCAGAGTAACCTCAGCTGGTTTGAAAACATTAATGGTGCTGCTTCTTCTTCAGACAGTTTATGGAACATTGGAGAAACTGATGAAGAATTCTGGTTCTTACAGCAGCAACAACAGTTCAACAATAATGGTAGCTTCTGAAGTTAGAAAAAAAAAATAGAAATCGTTTTAAGTTAAATTATACACTATAGTATACGTGTGAAAGGAATTTGTTGTAAGGGAATAATTAAAAACAAAGAATTGTTCATAGGATATATGATCAGGTTTTTTATACCAAGCTTGATCATATATCATGGCGTTTTAACAAAGCGCTAAACTTGATTGGTTTTGTTTTTTGGGGGGGATTGCAATGATATTTTGTGGATAATTGATAAACTTGGATGAAATAATTTATGATTTAATGTTTGGAAAATAACTCATTCGTCGGTGGGACTATGTATACTATAAACATAAATAATGGAAATTGTATTCACACTATAGATTGAGTGATTTCCTCAATGGAAGCATAAT
CDS Sequence
- >AT3G06490.1
ATGGATGAAAAAGGAAGAAGCTTGAAGAACAACAACATGGAAGACGAGATGGACCTAAAGAGAGGTCCGTGGACTGCTGAAGAAGATTTTAAGCTCATGAATTACATTGCTACTAATGGAGAAGGTCGCTGGAACTCTCTTTCTCGTTGCGCCGGCCTCCAACGCACCGGTAAAAGCTGTAGACTAAGGTGGTTAAACTATCTCCGCCCTGACGTCCGCCGTGGAAACATTACACTTGAAGAACAACTCTTGATCCTCGAACTTCATTCCCGTTGGGGAAATAGATGGTCAAAAATCGCACAATATTTACCGGGAAGAACGGACAACGAGATCAAGAACTACTGGAGGACGCGGGTGCAAAAGCATGCGAAACAGTTGAAATGTGATGTGAATAGCCAACAATTCAAAGACACAATGAAGTACTTGTGGATGCCTCGACTAGTCGAGAGGATTCAGTCAGCCTCGGCCTCATCCGCAGCAGCAGCCACCACCACAACCACCACCACCACAGGATCAGCCGGCACGTCATCTTGCATCACAACCTCTAACAATCAATTCATGAATTACGACTACAACAACAACAACATGGGACAACAGTTTGGTGTAATGAGCAACAATGATTATATCACGCCTGAAAATTCCAGCGTGGCAGTGTCTCCGGCGTCAGACTTAACGGAGTACTACAGCGCTCCAAACCCTAACCCGGAATACTATTCGGGTCAAATGGGGAATAGTTATTATCCAGATCAGAATTTAGTGAGTTCACAATTATTACCGGATAATTATTTCGACTATAGTGGATTATTAGACGAAGATCTAACGGCTATGCAAGAGCAGAGTAACCTCAGCTGGTTTGAAAACATTAATGGTGCTGCTTCTTCTTCAGACAGTTTATGGAACATTGGAGAAACTGATGAAGAATTCTGGTTCTTACAGCAGCAACAACAGTTCAACAATAATGGTAGCTTCTGA
Protein Sequence
- >AT3G06490.1
MDEKGRSLKNNNMEDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQSASASSAAAATTTTTTTTGSAGTSSCITTSNNQFMNYDYNNNNMGQQFGVMSNNDYITPENSSVAVSPASDLTEYYSAPNPNPEYYSGQMGNSYYPDQNLVSSQLLPDNYFDYSGLLDEDLTAMQEQSNLSWFENINGAASSSDSLWNIGETDEEFWFLQQQQQFNNNGSF