Information report for AT3G06440
Gene Details
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Functional Descriptions
- GO:0048354 — acts upstream of or within — mucilage biosynthetic process involved in seed coat development
- GO:0018258 — involved in — protein O-linked glycosylation via hydroxyproline
- GO:0000139 — is active in — Golgi membrane
- GO:0005794 — located in — Golgi apparatus
- GO:0030246 — enables — carbohydrate binding
- GO:0008378 — enables — galactosyltransferase activity
- GO:0080147 — acts upstream of or within — root hair cell development
- GO:0010405 — involved in — arabinogalactan protein metabolic process
- GO:0016757 — enables — glycosyltransferase activity
- GO:1990714 — enables — hydroxyproline O-galactosyltransferase activity
- CS65853 — The mutation disrupts pollen tube growth in vitro.
Functional Keywords
Literature and News
- A unique beta1,3-galactosyltransferase is indispensable for the biosynthesis of N-glycans containing Lewis a structures in Arabidopsis thaliana. DOI: 10.1105/tpc.107.052985 ; PMID: 17630273
- Identification of a novel group of putative Arabidopsis thaliana beta-(1,3)-galactosyltransferases. DOI: 10.1007/s11103-008-9351-3 ; PMID: 18548197
- A small multigene hydroxyproline-O-galactosyltransferase family functions in arabinogalactan-protein glycosylation, growth and development in Arabidopsis. DOI: 10.1186/s12870-015-0670-7 ; PMID: 26690932
- CRISPR-Cas9 multiplex genome editing of the hydroxyproline-O-galactosyltransferase gene family alters arabinogalactan-protein glycosylation and function in Arabidopsis. DOI: 10.1186/s12870-020-02791-9 ; PMID: 33407116
Gene Resources
- UniProt: A0A2H1ZEH6
- EMBL: CP002686
- AlphaFoldDB: A0A2H1ZEH6
- EnsemblPlants: AT3G06440.2
- Gramene: AT3G06440.2
- ExpressionAtlas: AT3G06440
- InterPro: IPR001079, IPR002659, IPR013320
- PANTHER: PTHR11214, PTHR11214:SF3
- SUPFAM: SSF49899
- PROSITE: PS51304
- Gene3D: 2.60.120.200, 3.90.550.50
- SWISS-MODEL: A0A2H1ZEH6
- Conserved Domain Database: cd00070
Homologs
- Brassica napus BnaA07G0249900ZS, BnaA07G0347900ZS
- Brassica rapa Bra003785
- Citrullus lanatus Cla97C01G024910
- Cucumis melo MELO3C007101
- Glycine max Glyma.15G091500
- Juglans regia Jr03_14040
- Medicago truncatula Medtr2g018770
- Populus trichocarpa POPTR_006G011300v3
- Prunus persica PRUPE_4G086100
- Setaria italica SETIT_029833mg
Sequences
cDNA Sequence
- >AT3G06440.2
AAGATGCTCTCTGCTTCAGCTGGCCTTCGTCGTCTCTGCCTGGGCTCTGAAACTGCATTTGGCTGATCTTGGATCTTCATGAATTATGTACTTGAAAGATCATCGAAATTCAATATAAAACGGGTTACTCAATGAAGCAATTCATGTCAGTGGTGAGATTCAAATTTGGTTTCACTTCAGTCAGAATGAGGGATTGGTCGGTGGGAGTCTCCATTATGGTTCTTACATTGATCTTCATCATCCGTTATGAACAATCTGATCACACTCACACTGTGGATGATTCTAGTATAGAAGGAGAGAGTGTTCATGAACCCGCAAAGAAGCCACATTTTATGACTTTGGAAGATCTTGATTATCTATTTTCAAACAAGAGCTTTTTTGGAGAAGAAGAAGTGTCCAATGGAATGCTTGTATGGTCTCGAATGCGTCCATTTCTTGAAAGGCCAGATGCTTTGCCAGAAACTGCTCAAGGGATAGAAGAAGCTACATTGGCAATGAAAGGTTTGGTTTTAGAAATCAATAGAGAGAAGAGAGCTTATTCTTCTGGTATGGTCTCTAAGGAAATTAGAAGAATCTGTCCGGATTTTGTCACTGCATTTGATAAGGATTTGTCTGGTTTAAGTCATATTCAGCTCGTTGGCTCGGGATTATCAGGAGAAACTCGTCGGCCAATAATCTTGCGTTACAATGTGAACTTTTCTAAACCATCGATAGTGCAAAATACATGGACAGAGAAGCTAGGTTGGGGAAACGAAGAGCGATGCCAATATCATGGATCATTGAAAAATCATTTAGTTGATGAACTTCCTCTCTGCAACAAACAGACCGGTAGAATCATTTCGGAAAAGAGTTCCAACGATGATGCAACTATGGAACTTTCTCTTTCAAATGCTAATTTTCCATTTCTCAAAGGGAGTCCCTTCACTGCCGCATTGTGGTTTGGCTTAGAAGGTTTTCATATGACGATAAATGGGCGGCACGAGACTTCATTTGCTTACAGGGAGAAGCTCGAGCCATGGTTAGTCAGTGCAGTCAAAGTCTCAGGTGGTTTGAAAATTTTATCTGTCTTAGCCACAAGACTGCCCATTCCCGATGACCATGCATCTTTAATCATAGAAGAGAAACTTAAAGCTCCATCTCTTTCCGGGACAAGAATAGAACTATTGGTGGGTGTTTTCTCCACTGGAAATAATTTTAAGCGGCGTATGGCATTGAGAAGATCTTGGATGCAATACGAGGCAGTAAGATCTGGCAAAGTAGCTGTTCGATTTCTCATTGGCCTTCACACAAATGAAAAAGTCAATTTAGAGATGTGGAGAGAATCTAAGGCATATGGAGACATTCAGTTTATGCCATTTGTTGACTACTATGGTTTACTTAGCTTGAAAACAGTTGCGCTTTGCATTCTCGGGACCAAAGTCATCCCAGCAAAATACATAATGAAGACGGATGATGATGCGTTTGTACGGATTGATGAGCTCCTATCAAGTCTAGAAGAAAGACCGTCTAGTGCCCTTCTGTACGGTTTGATCTCATTTGATTCATCACCGGACCGTGAACAAGGCAGCAAATGGTTTATCCCTAAAGAGGAATGGCCTTTAGATTCATACCCTCCATGGGCACATGGCCCTGGCTACATCATCTCTCATGATATAGCGAAATTTGTGGTGAAGGGTCACCGTCAAAGAGATCTTGGACTTTTCAAGCTGGAAGATGTGGCGATGGGGATATGGATTCAACAATTCAACCAGACGATAAAAAGAGTGAAGTACATCAATGACAAAAGATTTCATAACAGTGATTGTAAATCAAATTACATTCTTGTTCATTACCAAACTCCTAGACTAATTTTGTGTCTTTGGGAGAAGCTGCAAAAAGAGAACCAATCTATTTGCTGCGAATAAATCTCTCGAGCATGTACGTATGTAACTTTTCTGGTTCTGTTTCACACTTCAGGAAGAAGTTCTCCCAGTTAAAGACACACTGGCTCGAGTATGTCAGAGTATATTGGC - >AT3G06440.1
AAGATGCTCTCTGCTTCAGCTGGCCTTCGTCGTCTCTGCCTGGGCTCTGAAACTGCATTTGGCTGATCTTGGATCTTCATGAATTATGTACTTGAAAGATCATCGAAATTCAATATAAAACGGGTTACTCAATGAAGCAATTCATGTCAGTGGTGAGATTCAAATTTGGTTTCACTTCAGTCAGAATGAGGGATTGGTCGGTGGGAGTCTCCATTATGGTTCTTACATTGATCTTCATCATCCGTTATGAACAATCTGATCACACTCACACTGTGGATGATTCTAGTATAGAAGGAGAGAGTGTTCATGAACCCGCAAAGAAGCCACATTTTATGACTTTGGAAGATCTTGATTATCTATTTTCAAACAAGAGCTTTTTTGGAGAAGAAGAAGTGTCCAATGGAATGCTTGTATGGTCTCGAATGCGTCCATTTCTTGAAAGGCCAGATGCTTTGCCAGAAACTGCTCAAGGGATAGAAGAAGCTACATTGGCAATGAAAGGTTTGGTTTTAGAAATCAATAGAGAGAAGAGAGCTTATTCTTCTGGTATGGTCTCTAAGGAAATTAGAAGAATCTGTCCGGATTTTGTCACTGCATTTGATAAGGATTTGTCTGGTTTAAGTCATATTCAGCTCGTTGGCTCGGGATTATCAGGAGAAACTCGTCGGCCAATAATCTTGCGTTACAATGTGAACTTTTCTAAACCATCGATAGTGCAAAATACATGGACAGAGAAGCTAGGTTGGGGAAACGAAGAGCGATGCCAATATCATGGATCATTGAAAAATCATTTAGTTGATGAACTTCCTCTCTGCAACAAACAGACCGGTAGAATCATTTCGGAAAAGAGTTCCAACGATGATGCAACTATGGAACTTTCTCTTTCAAATGCTAATTTTCCATTTCTCAAAGGGAGTCCCTTCACTGCCGCATTGTGGTTTGGCTTAGAAGGTTTTCATATGACGATAAATGGGCGGCACGAGACTTCATTTGCTTACAGGGAGAAGCTCGAGCCATGGTTAGTCAGTGCAGTCAAAGTCTCAGGTGGTTTGAAAATTTTATCTGTCTTAGCCACAAGACTGCCCATTCCCGATGACCATGCATCTTTAATCATAGAAGAGAAACTTAAAGCTCCATCTCTTTCCGGGACAAGAATAGAACTATTGGTGGGTGTTTTCTCCACTGGAAATAATTTTAAGCGGCGTATGGCATTGAGAAGATCTTGGATGCAATACGAGGCAGTAAGATCTGGCAAAGTAGCTGTTCGATTTCTCATTGGCCTTCACACAAATGAAAAAGTCAATTTAGAGATGTGGAGAGAATCTAAGGCATATGGAGACATTCAGTTTATGCCATTTGTTGACTACTATGGTTTACTTAGCTTGAAAACAGTTGCGCTTTGCATTCTCGGGACCAAAGTCATCCCAGCAAAATACATAATGAAGACGGATGATGATGCGTTTGTACGGATTGATGAGCTCCTATCAAGTCTAGAAGAAAGACCGTCTAGTGCCCTTCTGTACGGTTTGATCTCATTTGATTCATCACCGGACCGTGAACAAGGCAGCAAATGGTTTATCCCTAAAGAGGAATGGCCTTTAGATTCATACCCTCCATGGGCACATGGCCCTGGCTACATCATCTCTCATGATATAGCGAAATTTGTGGTGAAGGGTCACCGTCAAAGAGATCTTGGACTTTTCAAGCTGGAAGATGTGGCGATGGGGATATGGATTCAACAATTCAACCAGACGATAAAAAGAGTGAAGTACATCAATGACAAAAGATTTCATAACAGTGATTGTAAATCAAATTACATTCTTGTTCATTACCAAACTCCTAGACTAATTTTGTGTCTTTGGGAGAAGCTGCAAAAAGAGAACCAATCTATTTGCTGCGAATAAATCTCTCGAGCATGTACGTATGTAACTTTTCTGGTTCTGTTTCACACTTCAGGAAGAAGTTCTCCCAGTTAAAGACACACTGGCTCGAGTATGTCAGAGTATATTGGC
CDS Sequence
- >AT3G06440.2
ATGAAGCAATTCATGTCAGTGGTGAGATTCAAATTTGGTTTCACTTCAGTCAGAATGAGGGATTGGTCGGTGGGAGTCTCCATTATGGTTCTTACATTGATCTTCATCATCCGTTATGAACAATCTGATCACACTCACACTGTGGATGATTCTAGTATAGAAGGAGAGAGTGTTCATGAACCCGCAAAGAAGCCACATTTTATGACTTTGGAAGATCTTGATTATCTATTTTCAAACAAGAGCTTTTTTGGAGAAGAAGAAGTGTCCAATGGAATGCTTGTATGGTCTCGAATGCGTCCATTTCTTGAAAGGCCAGATGCTTTGCCAGAAACTGCTCAAGGGATAGAAGAAGCTACATTGGCAATGAAAGGTTTGGTTTTAGAAATCAATAGAGAGAAGAGAGCTTATTCTTCTGGTATGGTCTCTAAGGAAATTAGAAGAATCTGTCCGGATTTTGTCACTGCATTTGATAAGGATTTGTCTGGTTTAAGTCATATTCAGCTCGTTGGCTCGGGATTATCAGGAGAAACTCGTCGGCCAATAATCTTGCGTTACAATGTGAACTTTTCTAAACCATCGATAGTGCAAAATACATGGACAGAGAAGCTAGGTTGGGGAAACGAAGAGCGATGCCAATATCATGGATCATTGAAAAATCATTTAGTTGATGAACTTCCTCTCTGCAACAAACAGACCGGTAGAATCATTTCGGAAAAGAGTTCCAACGATGATGCAACTATGGAACTTTCTCTTTCAAATGCTAATTTTCCATTTCTCAAAGGGAGTCCCTTCACTGCCGCATTGTGGTTTGGCTTAGAAGGTTTTCATATGACGATAAATGGGCGGCACGAGACTTCATTTGCTTACAGGGAGAAGCTCGAGCCATGGTTAGTCAGTGCAGTCAAAGTCTCAGGTGGTTTGAAAATTTTATCTGTCTTAGCCACAAGACTGCCCATTCCCGATGACCATGCATCTTTAATCATAGAAGAGAAACTTAAAGCTCCATCTCTTTCCGGGACAAGAATAGAACTATTGGTGGGTGTTTTCTCCACTGGAAATAATTTTAAGCGGCGTATGGCATTGAGAAGATCTTGGATGCAATACGAGGCAGTAAGATCTGGCAAAGTAGCTGTTCGATTTCTCATTGGCCTTCACACAAATGAAAAAGTCAATTTAGAGATGTGGAGAGAATCTAAGGCATATGGAGACATTCAGTTTATGCCATTTGTTGACTACTATGGTTTACTTAGCTTGAAAACAGTTGCGCTTTGCATTCTCGGGACCAAAGTCATCCCAGCAAAATACATAATGAAGACGGATGATGATGCGTTTGTACGGATTGATGAGCTCCTATCAAGTCTAGAAGAAAGACCGTCTAGTGCCCTTCTGTACGGTTTGATCTCATTTGATTCATCACCGGACCGTGAACAAGGCAGCAAATGGTTTATCCCTAAAGAGGAATGGCCTTTAGATTCATACCCTCCATGGGCACATGGCCCTGGCTACATCATCTCTCATGATATAGCGAAATTTGTGGTGAAGGGTCACCGTCAAAGAGATCTTGGACTTTTCAAGCTGGAAGATGTGGCGATGGGGATATGGATTCAACAATTCAACCAGACGATAAAAAGAGTGAAGTACATCAATGACAAAAGATTTCATAACAGTGATTGTAAATCAAATTACATTCTTGTTCATTACCAAACTCCTAGACTAATTTTGTGTCTTTGGGAGAAGCTGCAAAAAGAGAACCAATCTATTTGCTGCGAATAA - >AT3G06440.1
ATGAAGCAATTCATGTCAGTGGTGAGATTCAAATTTGGTTTCACTTCAGTCAGAATGAGGGATTGGTCGGTGGGAGTCTCCATTATGGTTCTTACATTGATCTTCATCATCCGTTATGAACAATCTGATCACACTCACACTGTGGATGATTCTAGTATAGAAGGAGAGAGTGTTCATGAACCCGCAAAGAAGCCACATTTTATGACTTTGGAAGATCTTGATTATCTATTTTCAAACAAGAGCTTTTTTGGAGAAGAAGAAGTGTCCAATGGAATGCTTGTATGGTCTCGAATGCGTCCATTTCTTGAAAGGCCAGATGCTTTGCCAGAAACTGCTCAAGGGATAGAAGAAGCTACATTGGCAATGAAAGGTTTGGTTTTAGAAATCAATAGAGAGAAGAGAGCTTATTCTTCTGGTATGGTCTCTAAGGAAATTAGAAGAATCTGTCCGGATTTTGTCACTGCATTTGATAAGGATTTGTCTGGTTTAAGTCATATTCAGCTCGTTGGCTCGGGATTATCAGGAGAAACTCGTCGGCCAATAATCTTGCGTTACAATGTGAACTTTTCTAAACCATCGATAGTGCAAAATACATGGACAGAGAAGCTAGGTTGGGGAAACGAAGAGCGATGCCAATATCATGGATCATTGAAAAATCATTTAGTTGATGAACTTCCTCTCTGCAACAAACAGACCGGTAGAATCATTTCGGAAAAGAGTTCCAACGATGATGCAACTATGGAACTTTCTCTTTCAAATGCTAATTTTCCATTTCTCAAAGGGAGTCCCTTCACTGCCGCATTGTGGTTTGGCTTAGAAGGTTTTCATATGACGATAAATGGGCGGCACGAGACTTCATTTGCTTACAGGGAGAAGCTCGAGCCATGGTTAGTCAGTGCAGTCAAAGTCTCAGGTGGTTTGAAAATTTTATCTGTCTTAGCCACAAGACTGCCCATTCCCGATGACCATGCATCTTTAATCATAGAAGAGAAACTTAAAGCTCCATCTCTTTCCGGGACAAGAATAGAACTATTGGTGGGTGTTTTCTCCACTGGAAATAATTTTAAGCGGCGTATGGCATTGAGAAGATCTTGGATGCAATACGAGGCAGTAAGATCTGGCAAAGTAGCTGTTCGATTTCTCATTGGCCTTCACACAAATGAAAAAGTCAATTTAGAGATGTGGAGAGAATCTAAGGCATATGGAGACATTCAGTTTATGCCATTTGTTGACTACTATGGTTTACTTAGCTTGAAAACAGTTGCGCTTTGCATTCTCGGGACCAAAGTCATCCCAGCAAAATACATAATGAAGACGGATGATGATGCGTTTGTACGGATTGATGAGCTCCTATCAAGTCTAGAAGAAAGACCGTCTAGTGCCCTTCTGTACGGTTTGATCTCATTTGATTCATCACCGGACCGTGAACAAGGCAGCAAATGGTTTATCCCTAAAGAGGAATGGCCTTTAGATTCATACCCTCCATGGGCACATGGCCCTGGCTACATCATCTCTCATGATATAGCGAAATTTGTGGTGAAGGGTCACCGTCAAAGAGATCTTGGACTTTTCAAGCTGGAAGATGTGGCGATGGGGATATGGATTCAACAATTCAACCAGACGATAAAAAGAGTGAAGTACATCAATGACAAAAGATTTCATAACAGTGATTGTAAATCAAATTACATTCTTGTTCATTACCAAACTCCTAGACTAATTTTGTGTCTTTGGGAGAAGCTGCAAAAAGAGAACCAATCTATTTGCTGCGAATAA
Protein Sequence
- >AT3G06440.2
MKQFMSVVRFKFGFTSVRMRDWSVGVSIMVLTLIFIIRYEQSDHTHTVDDSSIEGESVHEPAKKPHFMTLEDLDYLFSNKSFFGEEEVSNGMLVWSRMRPFLERPDALPETAQGIEEATLAMKGLVLEINREKRAYSSGMVSKEIRRICPDFVTAFDKDLSGLSHIQLVGSGLSGETRRPIILRYNVNFSKPSIVQNTWTEKLGWGNEERCQYHGSLKNHLVDELPLCNKQTGRIISEKSSNDDATMELSLSNANFPFLKGSPFTAALWFGLEGFHMTINGRHETSFAYREKLEPWLVSAVKVSGGLKILSVLATRLPIPDDHASLIIEEKLKAPSLSGTRIELLVGVFSTGNNFKRRMALRRSWMQYEAVRSGKVAVRFLIGLHTNEKVNLEMWRESKAYGDIQFMPFVDYYGLLSLKTVALCILGTKVIPAKYIMKTDDDAFVRIDELLSSLEERPSSALLYGLISFDSSPDREQGSKWFIPKEEWPLDSYPPWAHGPGYIISHDIAKFVVKGHRQRDLGLFKLEDVAMGIWIQQFNQTIKRVKYINDKRFHNSDCKSNYILVHYQTPRLILCLWEKLQKENQSICCE - >AT3G06440.1
MKQFMSVVRFKFGFTSVRMRDWSVGVSIMVLTLIFIIRYEQSDHTHTVDDSSIEGESVHEPAKKPHFMTLEDLDYLFSNKSFFGEEEVSNGMLVWSRMRPFLERPDALPETAQGIEEATLAMKGLVLEINREKRAYSSGMVSKEIRRICPDFVTAFDKDLSGLSHIQLVGSGLSGETRRPIILRYNVNFSKPSIVQNTWTEKLGWGNEERCQYHGSLKNHLVDELPLCNKQTGRIISEKSSNDDATMELSLSNANFPFLKGSPFTAALWFGLEGFHMTINGRHETSFAYREKLEPWLVSAVKVSGGLKILSVLATRLPIPDDHASLIIEEKLKAPSLSGTRIELLVGVFSTGNNFKRRMALRRSWMQYEAVRSGKVAVRFLIGLHTNEKVNLEMWRESKAYGDIQFMPFVDYYGLLSLKTVALCILGTKVIPAKYIMKTDDDAFVRIDELLSSLEERPSSALLYGLISFDSSPDREQGSKWFIPKEEWPLDSYPPWAHGPGYIISHDIAKFVVKGHRQRDLGLFKLEDVAMGIWIQQFNQTIKRVKYINDKRFHNSDCKSNYILVHYQTPRLILCLWEKLQKENQSICCE