Information report for AT3G06300
Gene Details
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Functional Descriptions
- PO:0000262 — trichoblast — tricoblasto (Spanish, exact), 根毛形成細胞、トリコブラスト (Japanese, exact), hair cell (related)
- GO:0031418 — enables — L-ascorbic acid binding
- GO:0080147 — acts upstream of or within — root hair cell development
- GO:0005506 — enables — iron ion binding
- GO:0005794 — located in — Golgi apparatus
- GO:0000137 — located in — Golgi cis cisterna
- GO:0005802 — located in — trans-Golgi network
- GO:0005783 — is active in — endoplasmic reticulum
- GO:0005768 — located in — endosome
- GO:0004656 — enables — procollagen-proline 4-dioxygenase activity
- GO:0005576 — located in — extracellular region
Functional Keywords
Literature and News
- Characterization of a second Arabidopsis thaliana prolyl 4-hydroxylase with distinct substrate specificity. DOI: 10.1074/jbc.M411109200 ; PMID: 15528200
- Response diversity of Arabidopsis thaliana ecotypes in elevated [CO2] in the field. DOI: 10.1007/s11103-006-9041-y ; PMID: 16941220
- Phytotoxicity and innate immune responses induced by Nep1-like proteins. DOI: 10.1105/tpc.106.044180 ; PMID: 17194768
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- O-glycosylated cell wall proteins are essential in root hair growth. DOI: 10.1126/science.1206657 ; PMID: 21680836
- Label-free protein quantification for plant Golgi protein localization and abundance. DOI: 10.1104/pp.114.245589 ; PMID: 25122472
- Complex regulation of prolyl-4-hydroxylases impacts root hair expansion. DOI: 10.1016/j.molp.2014.11.017 ; PMID: 25655826
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
Gene Resources
- UniProt: A0A178VGJ1
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178VGJ1
- EnsemblPlants: AT3G06300.1
- Gramene: AT3G06300.1
- KEGG: ath:AT3G06300
- Orthologous matrix: NCEKWAN
- ExpressionAtlas: AT3G06300
- InterPro: IPR003582, IPR005123, IPR006620
- PANTHER: PTHR10869, PTHR10869:SF165
- PROSITE: PS51471, PS51670
- Gene3D: 2.60.120.620
- SWISS-MODEL: A0A178VGJ1
Homologs
- Brassica napus GSBRNA2T00142818001, GSBRNA2T00092033001
- Brassica oleracea Bo00629s140, Bo3g039500
- Cicer arietinum Ca_00555
- Daucus carota DCAR_011173
- Fragaria vesca mrna01311.1-v1.0-hybrid
- Glycine max GmOXR17
- Malus domestica MDP0000253370, MDP0000244980
- Raphanus raphanistrum RrC309_p2
Sequences
cDNA Sequence
- >AT3G06300.1
TCACCATCTCCCTTGAGCCTCCTTGTTTTAGGTAGAACATCAACTTTTCATGACCGTTGACATTTTTTTTCCCTCTTTATTTTCCGAGAAAAAATAAATAAAATTATCCTCTAGTTTTCGATCTCGATCATCTGGATCCAAGAAATTACTACGATTGCTATAATGTCGATGTCTCGGCTCGGATTGTTGTTGTTCGTCGCTATATTGCTCGTCTTGCTTCAGTCTTCCACTTGTCTGATTAGTTCTCCAAGTTCTATCATCAATCCTTCTAAAGTCAAACAGGTTTCGTCGAAGCCCAGGGCATTTGTGTATGAAGGTTTTTTGACGGACTTGGAATGTGATCATCTAATCTCTCTTGCGAAAGAGAATCTGCAGAGATCTGCGGTTGCTGATAACGATAATGGCGAGAGTCAAGTCAGTGATGTTCGTACCAGCTCCGGCACTTTTATCTCCAAAGGAAAGGATCCTATTGTTTCCGGTATCGAGGACAAGCTCTCAACATGGACATTTCTCCCAAAAGAAAACGGGGAAGACCTTCAGGTATTGAGATATGAGCACGGTCAGAAATATGATGCTCACTTTGACTACTTCCACGACAAAGTCAACATTGCCCGTGGTGGACACCGCATAGCAACGGTTCTCTTGTATCTGTCCAATGTCACAAAGGGTGGAGAAACTGTTTTCCCCGATGCACAGGAATTCTCTCGCCGCTCGCTTTCTGAGAATAAAGACGATCTTTCTGATTGTGCAAAGAAAGGAATCGCTGTGAAACCGAAGAAAGGGAATGCTCTGTTGTTCTTCAACCTCCAACAAGACGCAATCCCAGACCCCTTTAGCCTTCACGGAGGTTGTCCAGTGATCGAAGGAGAGAAATGGTCGGCTACTAAGTGGATCCACGTGGACTCATTCGATAAGATATTGACACATGATGGTAACTGTACTGACGTAAACGAGAGCTGTGAGAGATGGGCAGTGCTTGGAGAATGTGGAAAGAATCCAGAGTATATGGTTGGAACTCCAGAGATCCCTGGGAATTGCAGACGTAGCTGTAAAGCTTGTTAAAGACTTTAAACTCCTCTTTTTCTCTGTAACATTAAAAGTTTTTTTTTCTTGATCGAGTTTCATTTTCTTGTTTCTGATTGTTGTTACATGTATCGTCTCGCTTTATAGAATGATTTTTTTCGTCTGGTTAACTTGAATTATATTAAAACAACTTACGTTAAATATATAATACAACTTTTTGTGATGAAAAATTTGAAAATAGATTATTTTTCCCCCTGAAATAGTTGCGATCGAGTCTCGTGACTTAGATCAACTACAAAAGTCGTCGTTTCTCGTAGATCTAGGGTTGTTTACTCCAACATGGATTCCAAATTGAAAAACGCGGATGATGATAATTCGATGATGGAGATATCTGAGGAGAATGAATCGAGGAAGCGCAAGGCAGATG
CDS Sequence
- >AT3G06300.1
ATGTCGATGTCTCGGCTCGGATTGTTGTTGTTCGTCGCTATATTGCTCGTCTTGCTTCAGTCTTCCACTTGTCTGATTAGTTCTCCAAGTTCTATCATCAATCCTTCTAAAGTCAAACAGGTTTCGTCGAAGCCCAGGGCATTTGTGTATGAAGGTTTTTTGACGGACTTGGAATGTGATCATCTAATCTCTCTTGCGAAAGAGAATCTGCAGAGATCTGCGGTTGCTGATAACGATAATGGCGAGAGTCAAGTCAGTGATGTTCGTACCAGCTCCGGCACTTTTATCTCCAAAGGAAAGGATCCTATTGTTTCCGGTATCGAGGACAAGCTCTCAACATGGACATTTCTCCCAAAAGAAAACGGGGAAGACCTTCAGGTATTGAGATATGAGCACGGTCAGAAATATGATGCTCACTTTGACTACTTCCACGACAAAGTCAACATTGCCCGTGGTGGACACCGCATAGCAACGGTTCTCTTGTATCTGTCCAATGTCACAAAGGGTGGAGAAACTGTTTTCCCCGATGCACAGGAATTCTCTCGCCGCTCGCTTTCTGAGAATAAAGACGATCTTTCTGATTGTGCAAAGAAAGGAATCGCTGTGAAACCGAAGAAAGGGAATGCTCTGTTGTTCTTCAACCTCCAACAAGACGCAATCCCAGACCCCTTTAGCCTTCACGGAGGTTGTCCAGTGATCGAAGGAGAGAAATGGTCGGCTACTAAGTGGATCCACGTGGACTCATTCGATAAGATATTGACACATGATGGTAACTGTACTGACGTAAACGAGAGCTGTGAGAGATGGGCAGTGCTTGGAGAATGTGGAAAGAATCCAGAGTATATGGTTGGAACTCCAGAGATCCCTGGGAATTGCAGACGTAGCTGTAAAGCTTGTTAA
Protein Sequence
- >AT3G06300.1
MSMSRLGLLLFVAILLVLLQSSTCLISSPSSIINPSKVKQVSSKPRAFVYEGFLTDLECDHLISLAKENLQRSAVADNDNGESQVSDVRTSSGTFISKGKDPIVSGIEDKLSTWTFLPKENGEDLQVLRYEHGQKYDAHFDYFHDKVNIARGGHRIATVLLYLSNVTKGGETVFPDAQEFSRRSLSENKDDLSDCAKKGIAVKPKKGNALLFFNLQQDAIPDPFSLHGGCPVIEGEKWSATKWIHVDSFDKILTHDGNCTDVNESCERWAVLGECGKNPEYMVGTPEIPGNCRRSCKAC