Gene Details:
- Gene ID: AT3G06060
- Gene Symbol: TSC10A
- Gene Name: TSC10A
- Description: NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)
- TAIR Accession: locus:2080379
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0047560 — enables — 3-dehydrosphinganine reductase activity
- GO:0006666 — involved in — 3-keto-sphinganine metabolic process
- GO:0030148 — acts upstream of or within — sphingolipid biosynthetic process
- GO:0030148 — involved in — sphingolipid biosynthetic process
- GO:0005789 — is active in — endoplasmic reticulum membrane
- GO:0005789 — located in — endoplasmic reticulum membrane
- GO:0009507 — located in — chloroplast
Function-related keywords:
Literature:
- A post-genomic approach to understanding sphingolipid metabolism in Arabidopsis thaliana. DOI: 10.1093/aob/mch071 ; PMID: 15037448
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
Sequences:
cDNA Sequence
- >AT3G06060.2
CAATTTTCTATTCATCTCTTTCATAAAAATGTGTATTAGTCTAAATCAACTACAACAAATAAGGTGATTAGTGTCAGTTGTTTTTTAACGACATCATTAGAAAATAGAAACCAATTTTGAAACACAACGACAACAAGTCACAAAATTATTATATAAAAAATAAATTACAGCGAGAAACTAAAACGGCCGGTTCAGATAGAAATCATTAAACCGAGTAATTGGTTAACTGGTCTAATCGTATTTGTTTTTATTTCTCCAATGAATGAGCTGACGGAGCTTCACATCGCCGAGAGCTTCGTCACGAGATCCATGGCGGCCATTTCTCCTCTCTTCCTTCTCTTCCTCATTCCCATTATCCCACTATCGCTTCTCGCTATCTTAGCCCTAATTGTACGTCCTCGTCCCATTAAGATCCCTATCAAGTCCCGTCACGCCTTCATCACCGGTGGATCTAGCGGCATCGGTCTTGCTCTCGCCCACCGCGCCGCTTCCGAGGGCGCTCGTGTCTCAATCCTCGCCCGATCCGGATCAAAGCTCGAGGAGGCTAAGAAATCGATCCAGCTCGCCACTGGTGTCGAAGTCGCCACATTCTCTGCAGACGTTCGCGATTACGATGCAGTCTCGAAGGCGATAGATGAATCGGGACCGATCGATGTGTTGATTGTTAACCAAGGTGTGTTTACGGCGAAGGAGCTGGTGAAACATAGTCCTGAAGATGTCAAATTCACGATTGACGTAAATCTTGTTGGGAGCTTCAATGTGATTAAAGCCGCTTTGCCTGCCATGAAAGCAAGGAAAGATCGTGGACCTGCTTCCATCAGTCTCGTCTCCTCTCAAGCTGGTCAGGTTGGTGTCTATGGTTATGCTGCATATTCAGCAAGCAAGTTTGGTCTTCAGGGTTTAGCGCAAGCATTGCAACAGGAAGTTATATCTGATGATATTCATGTCACTCTTATTTTTCCTCCTGACACTAATACACCCGGCTTTGAAGAAGAACAGAAGAGCAGACCTGAAGTCACTGCCATAATAGCTGCATCCTCTGGTTCAATGGAAACAGAAGAAGTAGCAAAAAAGGCTATGGATGGCATAAAAGCAGGAAACTTCACCGTCTCATGCAACTTTGAGGGATTCTTACTGTCTCTCGCGACAACCGGCATGTCCCCTCAAAGATCATTTTGGCTTGCTTTTCTTGAAGTTATAACCGCAGGGCCTATAAGATTAATCGCTCTCTTCTTTCAATGGGATTGGTATAAAGCCATTGAAAAATGGAGCAAAACCAAAACCAAATGACAGCCCGACAATGTATCTTGAAGTGCTTTTGGCAGAAGCTTAAACATTGATGGGTATTCTCAAACCTTCTTCTCAGTCCGGTACCACGCCAGCTAGTCGACTATACCAATTCAGAATATCGACATTGCTGATAGTTTTGTAGAAACTCGTCAAGATTCATGTTTCCGGTCTTTGAACAAGCTCTGTTTTTTCTTTTTTTTTATAGAGAAATCAAAGAACTCATTTGAATGTATTTTTTACTTGGTCAAGAAGTGAATGTTTTTCACAAGATGAAATGTAAATGATGTATTTGAAAGAAGTAAAAACTTCAAAACCAAAATTTGAGTGTGTGCTGTTCTTGAGGCTTTTAAACAACGTGCAGTCTGATTTGTTTG - >AT3G06060.1
CAATTTTCTATTCATCTCTTTCATAAAAATGTGTATTAGTCTAAATCAACTACAACAAATAAGGTGATTAGTGTCAGTTGTTTTTTAACGACATCATTAGAAAATAGAAACCAATTTTGAAACACAACGACAACAAGTCACAAAATTATTATATAAAAAATAAATTACAGCGAGAAACTAAAACGGCCGGTTCAGATAGAAATCATTAAACCGAGTAATTGGTTAACTGGTCTAATCGTATTTGTTTTTATTTCTCCAATGAATGAGCTGACGGAGCTTCACATCGCCGAGAGCTTCGTCACGAGATCCATGGCGGCCATTTCTCCTCTCTTCCTTCTCTTCCTCATTCCCATTATCCCACTATCGCTTCTCGCTATCTTAGCCCTAATTGTACGTCCTCGTCCCATTAAGATCCCTATCAAGTCCCGTCACGCCTTCATCACCGGTGGATCTAGCGGCATCGGTCTTGCTCTCGCCCACCGCGCCGCTTCCGAGGGCGCTCGTGTCTCAATCCTCGCCCGATCCGGATCAAAGCTCGAGGAGGCTAAGAAATCGATCCAGCTCGCCACTGGTGTCGAAGTCGCCACATTCTCTGCAGACGTTCGCGATTACGATGCAGTCTCGAAGGCGATAGATGAATCGGGACCGATCGATGTGTTGATTGTTAACCAAGGTGTGTTTACGGCGAAGGAGCTGGTGAAACATAGTCCTGAAGATGTCAAATTCACGATTGACGTAAATCTTGTTGGGAGCTTCAATGTGATTAAAGCCGCTTTGCCTGCCATGAAAGCAAGGAAAGATCGTGGACCTGCTTCCATCAGTCTCGTCTCCTCTCAAGCTGGTCAGGTTGGTGTCTATGGTTATGCTGCATATTCAGCAAGCAAGTTTGGTCTTCAGGGTTTAGCGCAAGCATTGCAACAGGAAGTTATATCTGATGATATTCATGTCACTCTTATTTTTCCTCCTGACACTAATACACCCGGCTTTGAAGAAGAACAGAAGAGCAGACCTGAAGTCACTGCCATAATAGCTGCATCCTCTGGTTCAATGGAAACAGAAGAAGTAGCAAAAAAGGCTATGGATGGCATAAAAGCAGGAAACTTCACCGTCTCATGCAACTTTGAGGGATTCTTACTGTCTCTCGCGACAACCGGCATGTCCCCTCAAAGATCATTTTGGCTTGCTTTTCTTGAAGTTATAACCGCAGGGCCTATAAGATTAATCGCTCTCTTCTTTCAATGGGATTGGTATAAAGCCATTGAAAAATGGAGCAAAACCAAAACCAAATGACAGCCCGACAATGTATCTTGAAGTGCTTTTGGCAGAAGCTTAAACATTGATGGGTATTCTCAAACCTTCTTCTCAGTCCGGTACCACGCCAGCTAGTCGACTATACCAATTCAGAATATCGACATTGCTGATAGTTTTGTAGAAACTCGTCAAGATTCATGTTTCCGGTCTTTGAACAAGCTCTGTTTTTTCTTTTTTTTTATAGAGAAATCAAAGAACTCATTTGAATGTATTTTTTACTTGGTCAAGAAGTGAATGTTTTTCACAAGATGAAATGTAAATGATGTATTTGAAAGAAGTAAAAACTTCAAAACCAAAATTTGAGTGTGTGCTGTTCTTGAGGCTTTTAAACAACGTGCAGTCTGATTTGTTTG
CDS Sequence
- >AT3G06060.2
ATGAATGAGCTGACGGAGCTTCACATCGCCGAGAGCTTCGTCACGAGATCCATGGCGGCCATTTCTCCTCTCTTCCTTCTCTTCCTCATTCCCATTATCCCACTATCGCTTCTCGCTATCTTAGCCCTAATTGTACGTCCTCGTCCCATTAAGATCCCTATCAAGTCCCGTCACGCCTTCATCACCGGTGGATCTAGCGGCATCGGTCTTGCTCTCGCCCACCGCGCCGCTTCCGAGGGCGCTCGTGTCTCAATCCTCGCCCGATCCGGATCAAAGCTCGAGGAGGCTAAGAAATCGATCCAGCTCGCCACTGGTGTCGAAGTCGCCACATTCTCTGCAGACGTTCGCGATTACGATGCAGTCTCGAAGGCGATAGATGAATCGGGACCGATCGATGTGTTGATTGTTAACCAAGGTGTGTTTACGGCGAAGGAGCTGGTGAAACATAGTCCTGAAGATGTCAAATTCACGATTGACGTAAATCTTGTTGGGAGCTTCAATGTGATTAAAGCCGCTTTGCCTGCCATGAAAGCAAGGAAAGATCGTGGACCTGCTTCCATCAGTCTCGTCTCCTCTCAAGCTGGTCAGGTTGGTGTCTATGGTTATGCTGCATATTCAGCAAGCAAGTTTGGTCTTCAGGGTTTAGCGCAAGCATTGCAACAGGAAGTTATATCTGATGATATTCATGTCACTCTTATTTTTCCTCCTGACACTAATACACCCGGCTTTGAAGAAGAACAGAAGAGCAGACCTGAAGTCACTGCCATAATAGCTGCATCCTCTGGTTCAATGGAAACAGAAGAAGTAGCAAAAAAGGCTATGGATGGCATAAAAGCAGGAAACTTCACCGTCTCATGCAACTTTGAGGGATTCTTACTGTCTCTCGCGACAACCGGCATGTCCCCTCAAAGATCATTTTGGCTTGCTTTTCTTGAAGTTATAACCGCAGGGCCTATAAGATTAATCGCTCTCTTCTTTCAATGGGATTGGTATAAAGCCATTGAAAAATGGAGCAAAACCAAAACCAAATGA - >AT3G06060.1
ATGAATGAGCTGACGGAGCTTCACATCGCCGAGAGCTTCGTCACGAGATCCATGGCGGCCATTTCTCCTCTCTTCCTTCTCTTCCTCATTCCCATTATCCCACTATCGCTTCTCGCTATCTTAGCCCTAATTGTACGTCCTCGTCCCATTAAGATCCCTATCAAGTCCCGTCACGCCTTCATCACCGGTGGATCTAGCGGCATCGGTCTTGCTCTCGCCCACCGCGCCGCTTCCGAGGGCGCTCGTGTCTCAATCCTCGCCCGATCCGGATCAAAGCTCGAGGAGGCTAAGAAATCGATCCAGCTCGCCACTGGTGTCGAAGTCGCCACATTCTCTGCAGACGTTCGCGATTACGATGCAGTCTCGAAGGCGATAGATGAATCGGGACCGATCGATGTGTTGATTGTTAACCAAGGTGTGTTTACGGCGAAGGAGCTGGTGAAACATAGTCCTGAAGATGTCAAATTCACGATTGACGTAAATCTTGTTGGGAGCTTCAATGTGATTAAAGCCGCTTTGCCTGCCATGAAAGCAAGGAAAGATCGTGGACCTGCTTCCATCAGTCTCGTCTCCTCTCAAGCTGGTCAGGTTGGTGTCTATGGTTATGCTGCATATTCAGCAAGCAAGTTTGGTCTTCAGGGTTTAGCGCAAGCATTGCAACAGGAAGTTATATCTGATGATATTCATGTCACTCTTATTTTTCCTCCTGACACTAATACACCCGGCTTTGAAGAAGAACAGAAGAGCAGACCTGAAGTCACTGCCATAATAGCTGCATCCTCTGGTTCAATGGAAACAGAAGAAGTAGCAAAAAAGGCTATGGATGGCATAAAAGCAGGAAACTTCACCGTCTCATGCAACTTTGAGGGATTCTTACTGTCTCTCGCGACAACCGGCATGTCCCCTCAAAGATCATTTTGGCTTGCTTTTCTTGAAGTTATAACCGCAGGGCCTATAAGATTAATCGCTCTCTTCTTTCAATGGGATTGGTATAAAGCCATTGAAAAATGGAGCAAAACCAAAACCAAATGA
Protein Sequence
- >AT3G06060.2
MNELTELHIAESFVTRSMAAISPLFLLFLIPIIPLSLLAILALIVRPRPIKIPIKSRHAFITGGSSGIGLALAHRAASEGARVSILARSGSKLEEAKKSIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVNQGVFTAKELVKHSPEDVKFTIDVNLVGSFNVIKAALPAMKARKDRGPASISLVSSQAGQVGVYGYAAYSASKFGLQGLAQALQQEVISDDIHVTLIFPPDTNTPGFEEEQKSRPEVTAIIAASSGSMETEEVAKKAMDGIKAGNFTVSCNFEGFLLSLATTGMSPQRSFWLAFLEVITAGPIRLIALFFQWDWYKAIEKWSKTKTK - >AT3G06060.1
MNELTELHIAESFVTRSMAAISPLFLLFLIPIIPLSLLAILALIVRPRPIKIPIKSRHAFITGGSSGIGLALAHRAASEGARVSILARSGSKLEEAKKSIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVNQGVFTAKELVKHSPEDVKFTIDVNLVGSFNVIKAALPAMKARKDRGPASISLVSSQAGQVGVYGYAAYSASKFGLQGLAQALQQEVISDDIHVTLIFPPDTNTPGFEEEQKSRPEVTAIIAASSGSMETEEVAKKAMDGIKAGNFTVSCNFEGFLLSLATTGMSPQRSFWLAFLEVITAGPIRLIALFFQWDWYKAIEKWSKTKTK