Information report for AT3G06010
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009073 — stigma — estigma (Spanish, exact), stigmas (exact, plural), stigmata (exact, plural), 柱頭 (Japanese, exact), Poaceae stigma (narrow), Zea stigma (narrow)
- PO:0020041 — stipule — estípula (Spanish, exact), 托葉 (Japanese, exact)
- GO:0008094 — enables — ATP-dependent activity, acting on DNA
- GO:0009408 — acts upstream of or within — response to heat
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0003677 — enables — DNA binding
- GO:0010231 — involved in — maintenance of seed dormancy
- GO:0045944 — involved in — positive regulation of transcription by RNA polymerase II
- GO:0005634 — is active in — nucleus
- GO:0005634 — located in — nucleus
- GO:0010492 — involved in — maintenance of shoot apical meristem identity
- GO:0009651 — acts upstream of or within — response to salt stress
- GO:0010078 — involved in — maintenance of root meristem identity
- GO:0042393 — enables — histone binding
Functional Keywords
- cauline leaf , seed , stigma , stipule
Literature and News
- Isolation, sequence analysis, and expression studies of florally expressed cDNAs in Arabidopsis. DOI: 10.1023/B:PLAN.0000019063.18097.62 ; PMID: 15010618
- The Arabidopsis thaliana SNF2 homolog AtBRM controls shoot development and flowering. DOI: 10.1242/dev.01363 ; PMID: 15371304
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- Unique, shared, and redundant roles for the Arabidopsis SWI/SNF chromatin remodeling ATPases BRAHMA and SPLAYED. DOI: 10.1105/tpc.106.048272 ; PMID: 17293567
- The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth. DOI: 10.1105/tpc.106.041319 ; PMID: 17329565
- The SWI/SNF chromatin-remodeling gene AtCHR12 mediates temporary growth arrest in Arabidopsis thaliana upon perceiving environmental stress. DOI: 10.1111/j.1365-313X.2007.03185.x ; PMID: 17605754
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- Mutations in two non-canonical Arabidopsis SWI2/SNF2 chromatin remodeling ATPases cause embryogenesis and stem cell maintenance defects. DOI: 10.1111/tpj.12009 ; PMID: 23062007
- The TRIPLE PHD FINGERS proteins are required for SWI/SNF complex-mediated +1 nucleosome positioning and transcription start site determination in Arabidopsis. DOI: 10.1093/nar/gkac826 ; PMID: 36189880
- Comprehensive characterization of three classes of Arabidopsis SWI/SNF chromatin remodelling complexes. DOI: 10.1038/s41477-022-01282-z ; PMID: 36471048
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
Homologs
- Beta vulgaris BVRB_1g004420
- Brachypodium distachyon BRADI_3g01297v3
- Brassica oleracea Bo4g196000
- Citrullus lanatus Cla97C05G081810
- Glycine max Glyma.09G257900, Glyma.18G234700
- Lactuca sativa gene-LSAT_7X4220
- Medicago truncatula Medtr7g078090
- Musa acuminata Ma07_g16780, Ma03_g14210
- Prunus persica PRUPE_2G172900
- Rosa chinensis RchiOBHm_Chr1g0356661
Sequences
cDNA Sequence
- >AT3G06010.1
CGGGGGTTAAAAATGTAAATACAAGAAGATAGATGTTTGGTGAGTCCTAAAAATCGTAAACCAGATTTCCAAATTTCTCTCCGTCTCATCTTTGTCTCGGTCTCTCTCTCGAGTGTGTGTGTGTCTAAAGGCAAAGAGAGAGATTTGAGAAAACTGAATTACAAAAAAAAAAAAAAAAGACAACGAAAAAAAAGACATCAAATTTGCGAAAGTTGAAATCGAAAACGGTGAATACAAGTTCCCGCCATGGTGGCTCAGCAGCTCCAAGAGAGATGCGGCGGCACTTCTCAAGAAGATCCAGTTGAGACCACCAAGTCTCTGATCTGTGCTCTCAATTACATTTCTCGTGACCTTCCTTTGCCTCCTCACCTCTTCACCGCCGTTTCTTCAATCTACCATGGCGCTTCTTCTTCTTCTCTCTCTGACTCCGATGTCTCTCCGCCGCTACCTACTTCGCCGCCTGCGAATAAAGCTCCCTATGGAGCTGATTTGATGGGTGAATTCGAGGATGCACTTTTGAAGCAGAGACCAGATTGTGAATCAGGCTCTCGATTGATACAATTACTGGATAATCGGAATAAGAGTCATATCCAACGCCGCTTATCTGAACTTGAAGAATTACCTTCTACTAGAGGTGAAGATTTGCAGGCAAAGTGCTTACTTGAGCTTTATGGGCTTAAGCTACGGGAATTGCAAGGCAAGGTTCGAACCGCGGTGAGCTCGGAATTCTGGCTACGTCTGAACTGTGCAGATGTCAGTAGCCAAGTATTTGACTGGGGCATGATGCGGTTGCCTCGTCCATTTTATGGGGTTGGAGATCCTTTTGCTATGGAAGCTGATGATCAGTTCAGAAAGAAGCGTGACGCTGAGAGGTTATCACGTTTAGAAGAAGAGGAGAAGAATCTGATTGAAACTGCCAAGAGGAAATTCTTTGCAGAAGTACTCAATGCAGTACGTGAATTCCAGTTGCAAATTCAGGCGACTCAAAAACGCCGTAGGCAAAGGAATGATGGTGTGCAGGCTTGGCATGGGAGACAAAGACAACGCGCTACCCGTGCTGAAAAGTTGAGGCTCATGGCCCTTAAGTCCGATGATCAAGAGGCATACATGAAACTAGTAAAGGAGAGTAAAAATGAAAGACTAACCACTCTTTTAGAGGAGACAAACAAACTCCTTGCTAATTTGGGAGCTGCTGTTCAACGTCAGAAAGATGCTAAACTTCCGGAAGGCATTGATCTACTTAAAGACTCAGAATCTGACTTGTCTGAACTTGATGCTCCAAGAAGTGAACCATTGCAGGATCTGCTTCCTGATCAGGATATAGATATTACTGAGTCTGACAATAACGATGACTCTAATGATTTACTAGAAGGACAGAGGCAGTATAACTCGGCTATCCATTCAATACAAGAGAAGGTGACGGAGCAGCCCTCGCTTCTAGAAGGTGGGGAACTACGATCCTATCAATTAGAAGGGCTTCAATGGATGGTTTCTCTATTCAACAATAACCTCAATGGAATATTAGCTGATGAGATGGGTTTGGGAAAAACTATTCAAACAATTTCTCTGATTGCGTATCTTCTGGAGAATAAAGGTGTGCCTGGGCCTTATCTTATAGTTGCTCCAAAAGCTGTGCTACCAAATTGGGTAAACGAGTTTGCAACATGGGTACCAAGCATTGCAGCTTTTCTGTATGATGGACGTTTAGAGGAAAGGAAAGCAATAAGGGAAAAAATTGCAGGAGAAGGAAAATTTAATGTGTTGATAACCCATTATGATCTTATCATGAGAGATAAAGCATTTTTAAAGAAAATTGAGTGGTACTACATGATTGTTGATGAAGGACATCGGCTGAAGAACCACGAATCTGCTCTAGCAAAGACTTTATTAACAGGCTATCGTATAAAACGCAGACTTCTGTTGACCGGGACACCCATACAGAATAGCCTTCAAGAACTATGGTCATTGCTTAATTTTCTCCTTCCTCACATCTTTAACTCGGTTCAGAACTTCGAGGAATGGTTTAATGCTCCTTTCGCTGACCGTGGTAATGTCAGTCTCACGGATGAAGAGGAGCTCTTGATTATTCACCGCCTGCATCATGTTATAAGGCCGTTTATACTGAGAAGGAAAAAGGACGAAGTAGAGAAATTCCTTCCTGGAAAGACACAGGTCATATTGAAGTGTGATATGTCGGCGTGGCAGAAAGTGTATTACAAACAAGTTACAGACATGGGCAGGGTTGGCCTTCAAACAGGATCTGGGAAATCAAAGAGTCTGCAAAATCTAACGATGCAATTAAGAAAGTGTTGTAACCATCCTTATCTATTTGTTGGAGGAGACTACAATATGTGGAAGAAACCTGAGATTGTGAGAGCTTCAGGGAAATTTGAACTCCTTGATCGTCTCCTTCCAAAACTGCGCAAGGCTGGACATAGGATTCTTCTCTTCTCCCAAATGACCCGTCTCATTGACGTTCTTGAGATATACTTGACACTTAATGATTACAAATACCTTAGACTCGATGGTACCACAAAGACAGATCAAAGAGGGCTTTTACTGAAGCAATTCAACGAGCCAGATTCTCCCTACTTTATGTTTCTTTTGAGCACGCGTGCTGGAGGTCTCGGTTTGAACTTGCAAACTGCAGACACTGTTATTATCTTTGACAGTGATTGGAACCCACAAATGGACCAACAGGCCGAGGATCGAGCTCATCGCATAGGGCAGAAGAAGGAAGTCAGAGTGTTTGTTTTGGTTAGCGTTGGCTCTGTTGAAGAAGTAATATTGGAGCGTGCAAAGCAAAAGATGGGCATTGACGCCAAAGTCATACAAGCTGGACTTTTCAACACAACTTCCACTGCACAAGACAGAAGAGAGATGCTTGAAGAGATTATGCGTAAAGGAACAAGCTCGCTCGGGACAGATGTCCCCAGTGAGAGAGAAATAAACCGGCTAGCGGCTCGTAGTGAGGATGAATTTTGGATGTTTGAGCGAATGGATGAGGAGAGACGAAGGAAGGAGAATTACAGAGCCCGTCTGATGCAAGAGCAAGAAGTCCCTGAGTGGGCGTACACTACTCAGACCCAAGAGGAGAAGTTGAACAACGGAAAGTTCCATTTTGGTAGTGTCACAGGTAAGCGAAAACGTAAAGAGATTGTTTACAGCGACACACTAAGCGAGTTACAGTGGCTGAAAGCCGTGGAGAGCGGTGAAGACCTGTCAAAACTCTCAATGAGATATAATAGGAGAGAGGAGAACGCAAGCAACACAAAGACATCAACGAGCAAAAAAGTGATAGAATCTATCCAAACTGTGAGTGATGGGACGAGCGAGGAGGATGAAGAAGAGCAAGAAGAAGAAAGAGCGAAGGAGATGAGTGGAAAACAGAGAGTGGACAAGTCTGAAGAGGAAGAAGAAGAAGGTGAAGAAGAGAATGATGGAAAGGCAATATTCAAGTGGAATACTCATAAGAAGAAAAGGTCTAGATACTCTTTTACGTGTTCTTCGTCTGACTCTAGAGCTCAAAGTTCCAATGGAAGTAGACGAAAATGAAGAAGGTGAGGTGAGATCTGAGTTTGACTTTGGTCTCTTCTTCTACGTGTTTGTGTGTCTTCTTGCCAATGTAACTTATCCCAATCTAACATGTAATAGTAATACATGTATTTTAATTGGTCTCTGGTTAAGTTTAGCTTTTTGTTGTTGTTTTAAGGTACTACTACCAATGTATATGTTTCTTATGTAGAATGATTTATTCGGGATTGAAAAACCCTTTTCACCTAAAAGAAAACATACAGCATGTAATAATTTGTTCAGAAGATCTAAGAGACCAATTCATTTTTTGAGCTA
CDS Sequence
- >AT3G06010.1
ATGGTGGCTCAGCAGCTCCAAGAGAGATGCGGCGGCACTTCTCAAGAAGATCCAGTTGAGACCACCAAGTCTCTGATCTGTGCTCTCAATTACATTTCTCGTGACCTTCCTTTGCCTCCTCACCTCTTCACCGCCGTTTCTTCAATCTACCATGGCGCTTCTTCTTCTTCTCTCTCTGACTCCGATGTCTCTCCGCCGCTACCTACTTCGCCGCCTGCGAATAAAGCTCCCTATGGAGCTGATTTGATGGGTGAATTCGAGGATGCACTTTTGAAGCAGAGACCAGATTGTGAATCAGGCTCTCGATTGATACAATTACTGGATAATCGGAATAAGAGTCATATCCAACGCCGCTTATCTGAACTTGAAGAATTACCTTCTACTAGAGGTGAAGATTTGCAGGCAAAGTGCTTACTTGAGCTTTATGGGCTTAAGCTACGGGAATTGCAAGGCAAGGTTCGAACCGCGGTGAGCTCGGAATTCTGGCTACGTCTGAACTGTGCAGATGTCAGTAGCCAAGTATTTGACTGGGGCATGATGCGGTTGCCTCGTCCATTTTATGGGGTTGGAGATCCTTTTGCTATGGAAGCTGATGATCAGTTCAGAAAGAAGCGTGACGCTGAGAGGTTATCACGTTTAGAAGAAGAGGAGAAGAATCTGATTGAAACTGCCAAGAGGAAATTCTTTGCAGAAGTACTCAATGCAGTACGTGAATTCCAGTTGCAAATTCAGGCGACTCAAAAACGCCGTAGGCAAAGGAATGATGGTGTGCAGGCTTGGCATGGGAGACAAAGACAACGCGCTACCCGTGCTGAAAAGTTGAGGCTCATGGCCCTTAAGTCCGATGATCAAGAGGCATACATGAAACTAGTAAAGGAGAGTAAAAATGAAAGACTAACCACTCTTTTAGAGGAGACAAACAAACTCCTTGCTAATTTGGGAGCTGCTGTTCAACGTCAGAAAGATGCTAAACTTCCGGAAGGCATTGATCTACTTAAAGACTCAGAATCTGACTTGTCTGAACTTGATGCTCCAAGAAGTGAACCATTGCAGGATCTGCTTCCTGATCAGGATATAGATATTACTGAGTCTGACAATAACGATGACTCTAATGATTTACTAGAAGGACAGAGGCAGTATAACTCGGCTATCCATTCAATACAAGAGAAGGTGACGGAGCAGCCCTCGCTTCTAGAAGGTGGGGAACTACGATCCTATCAATTAGAAGGGCTTCAATGGATGGTTTCTCTATTCAACAATAACCTCAATGGAATATTAGCTGATGAGATGGGTTTGGGAAAAACTATTCAAACAATTTCTCTGATTGCGTATCTTCTGGAGAATAAAGGTGTGCCTGGGCCTTATCTTATAGTTGCTCCAAAAGCTGTGCTACCAAATTGGGTAAACGAGTTTGCAACATGGGTACCAAGCATTGCAGCTTTTCTGTATGATGGACGTTTAGAGGAAAGGAAAGCAATAAGGGAAAAAATTGCAGGAGAAGGAAAATTTAATGTGTTGATAACCCATTATGATCTTATCATGAGAGATAAAGCATTTTTAAAGAAAATTGAGTGGTACTACATGATTGTTGATGAAGGACATCGGCTGAAGAACCACGAATCTGCTCTAGCAAAGACTTTATTAACAGGCTATCGTATAAAACGCAGACTTCTGTTGACCGGGACACCCATACAGAATAGCCTTCAAGAACTATGGTCATTGCTTAATTTTCTCCTTCCTCACATCTTTAACTCGGTTCAGAACTTCGAGGAATGGTTTAATGCTCCTTTCGCTGACCGTGGTAATGTCAGTCTCACGGATGAAGAGGAGCTCTTGATTATTCACCGCCTGCATCATGTTATAAGGCCGTTTATACTGAGAAGGAAAAAGGACGAAGTAGAGAAATTCCTTCCTGGAAAGACACAGGTCATATTGAAGTGTGATATGTCGGCGTGGCAGAAAGTGTATTACAAACAAGTTACAGACATGGGCAGGGTTGGCCTTCAAACAGGATCTGGGAAATCAAAGAGTCTGCAAAATCTAACGATGCAATTAAGAAAGTGTTGTAACCATCCTTATCTATTTGTTGGAGGAGACTACAATATGTGGAAGAAACCTGAGATTGTGAGAGCTTCAGGGAAATTTGAACTCCTTGATCGTCTCCTTCCAAAACTGCGCAAGGCTGGACATAGGATTCTTCTCTTCTCCCAAATGACCCGTCTCATTGACGTTCTTGAGATATACTTGACACTTAATGATTACAAATACCTTAGACTCGATGGTACCACAAAGACAGATCAAAGAGGGCTTTTACTGAAGCAATTCAACGAGCCAGATTCTCCCTACTTTATGTTTCTTTTGAGCACGCGTGCTGGAGGTCTCGGTTTGAACTTGCAAACTGCAGACACTGTTATTATCTTTGACAGTGATTGGAACCCACAAATGGACCAACAGGCCGAGGATCGAGCTCATCGCATAGGGCAGAAGAAGGAAGTCAGAGTGTTTGTTTTGGTTAGCGTTGGCTCTGTTGAAGAAGTAATATTGGAGCGTGCAAAGCAAAAGATGGGCATTGACGCCAAAGTCATACAAGCTGGACTTTTCAACACAACTTCCACTGCACAAGACAGAAGAGAGATGCTTGAAGAGATTATGCGTAAAGGAACAAGCTCGCTCGGGACAGATGTCCCCAGTGAGAGAGAAATAAACCGGCTAGCGGCTCGTAGTGAGGATGAATTTTGGATGTTTGAGCGAATGGATGAGGAGAGACGAAGGAAGGAGAATTACAGAGCCCGTCTGATGCAAGAGCAAGAAGTCCCTGAGTGGGCGTACACTACTCAGACCCAAGAGGAGAAGTTGAACAACGGAAAGTTCCATTTTGGTAGTGTCACAGGTAAGCGAAAACGTAAAGAGATTGTTTACAGCGACACACTAAGCGAGTTACAGTGGCTGAAAGCCGTGGAGAGCGGTGAAGACCTGTCAAAACTCTCAATGAGATATAATAGGAGAGAGGAGAACGCAAGCAACACAAAGACATCAACGAGCAAAAAAGTGATAGAATCTATCCAAACTGTGAGTGATGGGACGAGCGAGGAGGATGAAGAAGAGCAAGAAGAAGAAAGAGCGAAGGAGATGAGTGGAAAACAGAGAGTGGACAAGTCTGAAGAGGAAGAAGAAGAAGGTGAAGAAGAGAATGATGGAAAGGCAATATTCAAGTGGAATACTCATAAGAAGAAAAGGTCTAGATACTCTTTTACGTGTTCTTCGTCTGACTCTAGAGCTCAAAGTTCCAATGGAAGTAGACGAAAATGA
Protein Sequence
- >AT3G06010.1
MVAQQLQERCGGTSQEDPVETTKSLICALNYISRDLPLPPHLFTAVSSIYHGASSSSLSDSDVSPPLPTSPPANKAPYGADLMGEFEDALLKQRPDCESGSRLIQLLDNRNKSHIQRRLSELEELPSTRGEDLQAKCLLELYGLKLRELQGKVRTAVSSEFWLRLNCADVSSQVFDWGMMRLPRPFYGVGDPFAMEADDQFRKKRDAERLSRLEEEEKNLIETAKRKFFAEVLNAVREFQLQIQATQKRRRQRNDGVQAWHGRQRQRATRAEKLRLMALKSDDQEAYMKLVKESKNERLTTLLEETNKLLANLGAAVQRQKDAKLPEGIDLLKDSESDLSELDAPRSEPLQDLLPDQDIDITESDNNDDSNDLLEGQRQYNSAIHSIQEKVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGKFNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHHVIRPFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRKGTSSLGTDVPSEREINRLAARSEDEFWMFERMDEERRRKENYRARLMQEQEVPEWAYTTQTQEEKLNNGKFHFGSVTGKRKRKEIVYSDTLSELQWLKAVESGEDLSKLSMRYNRREENASNTKTSTSKKVIESIQTVSDGTSEEDEEEQEEERAKEMSGKQRVDKSEEEEEEGEEENDGKAIFKWNTHKKKRSRYSFTCSSSDSRAQSSNGSRRK