Information report for AT3G05970
Gene Details
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Functional Descriptions
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0004467 — enables — long-chain fatty acid-CoA ligase activity
- GO:0006631 — involved in — fatty acid metabolic process
- GO:0016020 — is active in — membrane
- GO:0005829 — located in — cytosol
- GO:0010193 — involved in — response to ozone
- GO:0005783 — is active in — endoplasmic reticulum
- GO:0009507 — located in — chloroplast
- GO:0001676 — acts upstream of or within — long-chain fatty acid metabolic process
- GO:0005777 — located in — peroxisome
Functional Keywords
- rosette leaf , root , seed , pollen
Literature and News
- Arabidopsis contains nine long-chain acyl-coenzyme a synthetase genes that participate in fatty acid and glycerolipid metabolism. DOI: 10.1104/pp.003269 ; PMID: 12177484
- Two long-chain acyl-CoA synthetases from Arabidopsis thaliana involved in peroxisomal fatty acid beta-oxidation. DOI: 10.1046/j.1365-313x.2002.01405.x ; PMID: 12366803
- Arabidopsis contains a large superfamily of acyl-activating enzymes. Phylogenetic and biochemical analysis reveals a new class of acyl-coenzyme a synthetases. DOI: 10.1104/pp.103.020552 ; PMID: 12805634
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana. DOI: 10.1093/pcp/pcg173 ; PMID: 14701923
- Cesium toxicity in Arabidopsis. DOI: 10.1104/pp.104.046672 ; PMID: 15489280
- Storage reserve mobilization in germinating oilseeds: Arabidopsis as a model system. DOI: 10.1042/BST0330380 ; PMID: 15787611
- Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02399.x ; PMID: 15860015
- AtLACS7 interacts with the TPR domains of the PTS1 receptor PEX5. DOI: 10.1016/j.abb.2005.09.003 ; PMID: 16256065
- WRKY70 modulates the selection of signaling pathways in plant defense. DOI: 10.1111/j.1365-313X.2006.02712.x ; PMID: 16623907
- Analysis of the role of COMATOSE and peroxisomal beta-oxidation in the determination of germination potential in Arabidopsis. DOI: 10.1093/jxb/erl045 ; PMID: 16844736
- Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. DOI: 10.1104/pp.108.129999 ; PMID: 18931141
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Gene expression in plant lipid metabolism in Arabidopsis seedlings. DOI: 10.1371/journal.pone.0107372 ; PMID: 25264899
- Arabidopsis SFAR4 is a novel GDSL-type esterase involved in fatty acid degradation and glucose tolerance. DOI: 10.1186/s40529-015-0114-6 ; PMID: 28510842
- Brassica napus cDNAs encoding fatty acyl-CoA synthetase. DOI: 10.1023/a:1005780529307 ; PMID: 9106514
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
Gene Resources
- UniProt: A0A5S9X9I0
- EMBL: CACSHJ010000089
- AlphaFoldDB: A0A5S9X9I0
- EnsemblPlants: AT3G05970.1
- Gramene: AT3G05970.1
- KEGG: ath:AT3G05970
- Orthologous matrix: WYHSIGL
- ExpressionAtlas: AT3G05970
- InterPro: IPR000873, IPR020845, IPR042099
- PANTHER: PTHR43272, PTHR43272:SF33
- SUPFAM: SSF56801
- PROSITE: PS00455
- Gene3D: 3.40.50.12780
- OrthoDB: A0A5S9X9I0
- SWISS-MODEL: A0A5S9X9I0
- Conserved Domain Database: cd05927
Homologs
- Brassica napus BnLACS9-C06
- Oryza sativa OsLACS9, Os4CL5, Os4CL3, OsACOS12, Os4CL4, Os4CL2, Os4CL1, OsBIABP1;SLAC1, OsAAE3, OsACS
- Solanum tuberosum Soltu.DM.08G021250
Sequences
cDNA Sequence
- >AT3G05970.1
TTGGAGAAGACTTGAAAACACGAAATCAACGGATAGCGACATCATGAAACAGAGTTAGAAAAGCGTGCCTCCTTTTTTTAGTATCTATCTTTCTCTCTTTCGGATCATTCTCTCCTCTGATTCCGAATCGGGTAAATTATTATGGATTCTTCTTCTTCGTCTTCCTCCGCCGCCGCACGCCGCCGTATCAACGCTATCCACTCTCACCTCGTCACCTCTTCTCGCTCTTCCCCTCTCCTCCGCTCCAATCCCACCGCCGGCGAGTTCTGTCTTGATAATGGCTATAGTGTTGTTCTTCCCGAGAAACTGAATACTGGCAGTTGGAACGTCTACAGATCTGCAAAATCTCCGTTCAAGCTCGTTAGCAGATTCCCAGATCATCCTGACATCGCTACTCTCCATGACAATTTTGAGCATGCTGTTCATGATTTTCGAGATTACAAGTATTTAGGAACTCGTGTTCGTGTCGACGGAACTGTTGGAGACTACAAATGGATGACATATGGAGAAGCTGGTACAGCAAGAACTGCTTTAGGTTCTGGTTTGGTTCATCACGGAATCCCCATGGGATCTTCTGTTGGAATTTACTTCATCAATCGCCCAGAGTGGCTCATTGTTGATCATGCTTGTTCTTCTTATTCTTATGTGTCTGTTCCTTTGTATGATACTCTTGGTCCTGATGCTGTGAAATTTATTGTCAATCATGCAACTGTGCAAGCCATATTTTGTGTGGCAGAGACTTTAAACTCTTTACTTAGCTGTTTGTCTGAGATGCCAAGTGTACGCCTGGTGGTGGTTGTTGGAGGGTTAATTGAATCTTTACCCTCGCTTCCCTCATCATCAGGAGTGAAAGTTGTATCCTATTCGGTGTTACTGAATCAGGGTCGTAGTAACCCTCAGCGATTTTTTCCACCAAAACCCGATGATGTTGCAACCATATGCTATACAAGCGGAACAACTGGGACACCCAAGGGAGTCGTATTAACTCATGCAAACTTGATTGCCAATGTTGCTGGCTCCAGCTTTAGTGTGAAGTTTTTCTCTTCAGATGTTTACATTTCGTATCTTCCACTTGCTCACATTTACGAACGAGCTAATCAGATCCTAACAGTGTACTTTGGAGTTGCTGTTGGATTCTACCAAGGGGACAATATGAAACTACTGGATGATTTGGCTGCTCTGAGACCTACTGTATTTAGCAGTGTCCCTCGATTATACAATAGAATATATGCTGGTATCATTAATGCAGTAAAAACCTCTGGTGGTCTGAAAGAGAGACTCTTCAATGCTGCCTATAATGCAAAGAAGCAGGCTCTCTTGAATGGAAAGAGTGCTTCTCCCATATGGGACAGGTTGGTATTTAATAAAATAAAGGACAGACTTGGAGGGCGGGTTCGTTTTATGACGTCTGGTGCTTCACCTCTCTCTCCTGAAGTGATGGAATTTTTGAAAGTATGCTTTGGAGGAAGGGTAACAGAGGGATATGGAATGACTGAAACATCTTGTGTTATAAGTGGAATGGACGAGGGTGATAACCTCACTGGACATGTTGGCTCTCCTAATCCAGCTTGTGAAGTAAAGCTTGTGGATGTCCCAGAAATGAACTATACATCAGCGGATCAGCCCCATCCCCGTGGCGAAATATGTGTTAGGGGTCCTATCATTTTTACAGGCTATTACAAAGATGAAATTCAAACGAAAGAGGTGATTGATGAAGATGGATGGCTTCACACTGGAGATATAGGTCTGTGGCTGCCGGGAGGACGTCTAAAAATTATTGACAGAAAGAAGAACATCTTCAAATTGGCGCAGGGGGAGTATATAGCTCCAGAGAAAATTGAAAACGTCTATGCCAAATGCAAATTTGTGGGCCAGTGCTTCATATATGGTGATAGCTTTAATTCATCATTGGTAGCTGTTGTATCGGTTGATCCAGATGTGCTGAAAAGCTGGGCAGCTTCAGAAGGCATTAAGGGAGGAGATCTGAGAGAATTGTGTAATAATCCGAGAGTGAAAGCAGCAGTACTATCTGACATGGACACTGTTGGAAGAGAAGCTCAGTTGAGAGGCTTCGAGTTTGCAAAGGCTGTGACATTGGTGCTGGAACCATTTACTCTGGAAAATGGCTTGTTGACTCCGACGTTCAAGATTAAGAGACCACAAGCAAAGGAATATTTCGCAGAAGCAATAACAAACATGTACAAGGAGCTTGGTGCTTCTGATCCCTCTGCTAATAGAGGTTTGTGATGATGGTATAATCGTGTGATTAATAAAAAGCCTACGCAAAAGTTGTTTCTCCCACAAATTGTATTCTTTTTTGTTTTCTTGCTACATATTTATTGAATAGTAAAGGTAATAAAGGTGCTACATTACATTAATGAAACTTTCTTACAGTACAATGTTTTCCCTCTGTAATAAAAAGGCAAAACATTCCCAATTCTGTTTTATTGCGGATTCTTCGGCCTACCACGAAACGAC
CDS Sequence
- >AT3G05970.1
ATGGATTCTTCTTCTTCGTCTTCCTCCGCCGCCGCACGCCGCCGTATCAACGCTATCCACTCTCACCTCGTCACCTCTTCTCGCTCTTCCCCTCTCCTCCGCTCCAATCCCACCGCCGGCGAGTTCTGTCTTGATAATGGCTATAGTGTTGTTCTTCCCGAGAAACTGAATACTGGCAGTTGGAACGTCTACAGATCTGCAAAATCTCCGTTCAAGCTCGTTAGCAGATTCCCAGATCATCCTGACATCGCTACTCTCCATGACAATTTTGAGCATGCTGTTCATGATTTTCGAGATTACAAGTATTTAGGAACTCGTGTTCGTGTCGACGGAACTGTTGGAGACTACAAATGGATGACATATGGAGAAGCTGGTACAGCAAGAACTGCTTTAGGTTCTGGTTTGGTTCATCACGGAATCCCCATGGGATCTTCTGTTGGAATTTACTTCATCAATCGCCCAGAGTGGCTCATTGTTGATCATGCTTGTTCTTCTTATTCTTATGTGTCTGTTCCTTTGTATGATACTCTTGGTCCTGATGCTGTGAAATTTATTGTCAATCATGCAACTGTGCAAGCCATATTTTGTGTGGCAGAGACTTTAAACTCTTTACTTAGCTGTTTGTCTGAGATGCCAAGTGTACGCCTGGTGGTGGTTGTTGGAGGGTTAATTGAATCTTTACCCTCGCTTCCCTCATCATCAGGAGTGAAAGTTGTATCCTATTCGGTGTTACTGAATCAGGGTCGTAGTAACCCTCAGCGATTTTTTCCACCAAAACCCGATGATGTTGCAACCATATGCTATACAAGCGGAACAACTGGGACACCCAAGGGAGTCGTATTAACTCATGCAAACTTGATTGCCAATGTTGCTGGCTCCAGCTTTAGTGTGAAGTTTTTCTCTTCAGATGTTTACATTTCGTATCTTCCACTTGCTCACATTTACGAACGAGCTAATCAGATCCTAACAGTGTACTTTGGAGTTGCTGTTGGATTCTACCAAGGGGACAATATGAAACTACTGGATGATTTGGCTGCTCTGAGACCTACTGTATTTAGCAGTGTCCCTCGATTATACAATAGAATATATGCTGGTATCATTAATGCAGTAAAAACCTCTGGTGGTCTGAAAGAGAGACTCTTCAATGCTGCCTATAATGCAAAGAAGCAGGCTCTCTTGAATGGAAAGAGTGCTTCTCCCATATGGGACAGGTTGGTATTTAATAAAATAAAGGACAGACTTGGAGGGCGGGTTCGTTTTATGACGTCTGGTGCTTCACCTCTCTCTCCTGAAGTGATGGAATTTTTGAAAGTATGCTTTGGAGGAAGGGTAACAGAGGGATATGGAATGACTGAAACATCTTGTGTTATAAGTGGAATGGACGAGGGTGATAACCTCACTGGACATGTTGGCTCTCCTAATCCAGCTTGTGAAGTAAAGCTTGTGGATGTCCCAGAAATGAACTATACATCAGCGGATCAGCCCCATCCCCGTGGCGAAATATGTGTTAGGGGTCCTATCATTTTTACAGGCTATTACAAAGATGAAATTCAAACGAAAGAGGTGATTGATGAAGATGGATGGCTTCACACTGGAGATATAGGTCTGTGGCTGCCGGGAGGACGTCTAAAAATTATTGACAGAAAGAAGAACATCTTCAAATTGGCGCAGGGGGAGTATATAGCTCCAGAGAAAATTGAAAACGTCTATGCCAAATGCAAATTTGTGGGCCAGTGCTTCATATATGGTGATAGCTTTAATTCATCATTGGTAGCTGTTGTATCGGTTGATCCAGATGTGCTGAAAAGCTGGGCAGCTTCAGAAGGCATTAAGGGAGGAGATCTGAGAGAATTGTGTAATAATCCGAGAGTGAAAGCAGCAGTACTATCTGACATGGACACTGTTGGAAGAGAAGCTCAGTTGAGAGGCTTCGAGTTTGCAAAGGCTGTGACATTGGTGCTGGAACCATTTACTCTGGAAAATGGCTTGTTGACTCCGACGTTCAAGATTAAGAGACCACAAGCAAAGGAATATTTCGCAGAAGCAATAACAAACATGTACAAGGAGCTTGGTGCTTCTGATCCCTCTGCTAATAGAGGTTTGTGA
Protein Sequence
- >AT3G05970.1
MDSSSSSSSAAARRRINAIHSHLVTSSRSSPLLRSNPTAGEFCLDNGYSVVLPEKLNTGSWNVYRSAKSPFKLVSRFPDHPDIATLHDNFEHAVHDFRDYKYLGTRVRVDGTVGDYKWMTYGEAGTARTALGSGLVHHGIPMGSSVGIYFINRPEWLIVDHACSSYSYVSVPLYDTLGPDAVKFIVNHATVQAIFCVAETLNSLLSCLSEMPSVRLVVVVGGLIESLPSLPSSSGVKVVSYSVLLNQGRSNPQRFFPPKPDDVATICYTSGTTGTPKGVVLTHANLIANVAGSSFSVKFFSSDVYISYLPLAHIYERANQILTVYFGVAVGFYQGDNMKLLDDLAALRPTVFSSVPRLYNRIYAGIINAVKTSGGLKERLFNAAYNAKKQALLNGKSASPIWDRLVFNKIKDRLGGRVRFMTSGASPLSPEVMEFLKVCFGGRVTEGYGMTETSCVISGMDEGDNLTGHVGSPNPACEVKLVDVPEMNYTSADQPHPRGEICVRGPIIFTGYYKDEIQTKEVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVGQCFIYGDSFNSSLVAVVSVDPDVLKSWAASEGIKGGDLRELCNNPRVKAAVLSDMDTVGREAQLRGFEFAKAVTLVLEPFTLENGLLTPTFKIKRPQAKEYFAEAITNMYKELGASDPSANRGL