Information report for AT3G05870
Gene Details
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Functional Descriptions
- GO:0005515 — enables — protein binding
- GO:0061630 — enables — ubiquitin protein ligase activity
- GO:0005680 — part of — anaphase-promoting complex
- GO:0007346 — acts upstream of or within — regulation of mitotic cell cycle
- GO:0097602 — enables — cullin family protein binding
- GO:0004842 — enables — ubiquitin-protein transferase activity
- GO:0031145 — involved in — anaphase-promoting complex-dependent catabolic process
- GO:0008270 — enables — zinc ion binding
- GO:0005634 — located in — nucleus
- GO:0016070 — acts upstream of or within — RNA metabolic process
Functional Keywords
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- First glance at the plant APC/C, a highly conserved ubiquitin-protein ligase. DOI: 10.1016/S1360-1385(02)00028-6 ; PMID: 12597875
- The Arabidopsis anaphase-promoting complex or cyclosome: molecular and genetic characterization of the APC2 subunit. DOI: 10.1105/tpc.013847 ; PMID: 14508008
- Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. DOI: 10.1038/msb.2010.53 ; PMID: 20706207
- Cullin 4-ring finger-ligase plays a key role in the control of endoreplication cycles in Arabidopsis trichomes. DOI: 10.1073/pnas.1006941107 ; PMID: 20696906
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Protein degradation in signaling. DOI: 10.1016/s1369-5266(00)00100-x ; PMID: 11019805
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: A0A1I9LLE4
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LLE4
- EnsemblPlants: AT3G05870.1, AT3G05870.2, AT3G05870.6
- Gramene: AT3G05870.1, AT3G05870.2, AT3G05870.6
- KEGG: ath:AT3G05870
- Orthologous matrix: KIPCHEL
- ExpressionAtlas: AT3G05870
- InterPro: IPR001841, IPR013083, IPR024991
- PANTHER: PTHR11210
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- OrthoDB: A0A1I9LLE4
- SWISS-MODEL: A0A1I9LLE4
- Conserved Domain Database: cd16456
Sequences
cDNA Sequence
- >AT3G05870.6
CACCATCGATCTTCACACTTATTTTTTAGGAGGAAGCTATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAAGCAAGTTATGAGGAGGATTAGTCTGCAGCTCTCGTCATAGGGGATGTTTTGGAATGATCTCGTGTAGTTGTATTTGGACCGTTAGTGTTGAGTATGATCATCTGCTGAAACGCAAGATAGAGCTTTAGTAATGTTTTTGAAGCTTGTCCTTGGTTTGATTGCTTGGACAAAGTAGAGATCAAGCAACTTTTTGTGAGCTTCATCATCTATATGGTCTTTGTTTGTAGTTAATACTTTTTTTTTTTTTTTTGTATCACGTCGCCTTTGAATTGGTTAATA - >AT3G05870.2
CACCATCGATCTTCACACTTATTTTTTAGGAGGAAGCTATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAAGCAAGTTATGAGGAGGATTAGTCTGCAGCTCTCGTCATAGGGGATGTTTTGGAATGATCTCGTGTAGTTGTATTTGGACCGTTAGTGTTGAGTATGATCATCTGCTGAAACGCAAGATAGAGCTTTAGTAATGTTTTTGAAGCTTGTCCTTGGTTTGATTGCTTGGACAAAGTAGAGATCAAGCAACTTTTTGTGAGCTTCATCATCTATATGGTCTTTGTTTGTAGTTAATACTTTTTTTTTTTTTTTTGTATCACGTCGCCTTTGAATTGGTTAATA - >AT3G05870.5
CACCATCGATCTTCACACTTATTTTTTAGGAGGAAGCTATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAAGCAAGTTATGAGGAGGATTAGTCTGCAGCTCTCGTCATAGGGGATGTTTTGGAATGATCTCGTGTAGTTGTATTTGGACCGTTAGTGTTGAGTATGATCATCTGCTGAAACGCAAGATAGAGCTTTAGTAATGTTTTTGAAGCTTGTCCTTGGTTTGATTGCTTGGACAAAGTAGAGATCAAGCAACTTTTTGTGAGCTTCATCATCTATATGGTCTTTGTTTGTAGTTAATACTTTTTTTTTTTTTTTTGTATCACGTCGCCTTTGAATTGGTTAATA - >AT3G05870.3
CACCATCGATCTTCACACTTATTTTTTAGGAGGAAGCTATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAAGCAAGTTATGAGGAGGATTAGTCTGCAGCTCTCGTCATAGGGGATGTTTTGGAATGATCTCGTGTAGTTGTATTTGGACCGTTAGTGTTGAGTATGATCATCTGCTGAAACGCAAGATAGAGCTTTAGTAATGTTTTTGAAGCTTGTCCTTGGTTTGATTGCTTGGACAAAGTAGAGATCAAGCAACTTTTTGTGAGCTTCATCATCTATATGGTCTTTGTTTGTAGTTAATACTTTTTTTTTTTTTTTTGTATCACGTCGCCTTTGAATTGGTTAATA - >AT3G05870.7
CACCATCGATCTTCACACTTATTTTTTAGGAGGAAGCTATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAAGCAAGTTATGAGGAGGATTAGTCTGCAGCTCTCGTCATAGGGGATGTTTTGGAATGATCTCGTGTAGTTGTATTTGGACCGTTAGTGTTGAGTATGATCATCTGCTGAAACGCAAGATAGAGCTTTAGTAATGTTTTTGAAGCTTGTCCTTGGTTTGATTGCTTGGACAAAGTAGAGATCAAGCAACTTTTTGTGAGCTTCATCATCTATATGGTCTTTGTTTGTAGTTAATACTTTTTTTTTTTTTTTTGTATCACGTCGCCTTTGAATTGGTTAATA - >AT3G05870.1
CACCATCGATCTTCACACTTATTTTTTAGGAGGAAGCTATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAAGCAAGTTATGAGGAGGATTAGTCTGCAGCTCTCGTCATAGGGGATGTTTTGGAATGATCTCGTGTAGTTGTATTTGGACCGTTAGTGTTGAGTATGATCATCTGCTGAAACGCAAGATAGAGCTTTAGTAATGTTTTTGAAGCTTGTCCTTGGTTTGATTGCTTGGACAAAGTAGAGATCAAGCAACTTTTTGTGAGCTTCATCATCTATATGGTCTTTGTTTGTAGTTAATACTTTTTTTTTTTTTTTTGTATCACGTCGCCTTTGAATTGGTTAATA - >AT3G05870.4
CACCATCGATCTTCACACTTATTTTTTAGGAGGAAGCTATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAAGCAAGTTATGAGGAGGATTAGTCTGCAGCTCTCGTCATAGGGGATGTTTTGGAATGATCTCGTGTAGTTGTATTTGGACCGTTAGTGTTGAGTATGATCATCTGCTGAAACGCAAGATAGAGCTTTAGTAATGTTTTTGAAGCTTGTCCTTGGTTTGATTGCTTGGACAAAGTAGAGATCAAGCAACTTTTTGTGAGCTTCATCATCTATATGGTCTTTGTTTGTAGTTAATACTTTTTTTTTTTTTTTTGTATCACGTCGCCTTTGAATTGGTTAATA
CDS Sequence
- >AT3G05870.6
ATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAA - >AT3G05870.2
ATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAA - >AT3G05870.5
ATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAA - >AT3G05870.3
ATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAA - >AT3G05870.7
ATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAA - >AT3G05870.1
ATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAA - >AT3G05870.4
ATGAAAGTCAAGATCTTGCGTATCCTTTTATGGCATGCAGTTGCTTCATGGACATGGGATGCTCAAGACGAAACATGTGGGATATGTCGGATGGCTTTTGATGGTTGTTGTCCTGATTGCAAACTTCCTGGAGATGATTGCCCTCTAATTTGGGGAGCCTGCAACCACGCGTTTCATCTTCACTGTATATTGAAATGGGTGAATTCGCAGACGAGCCAAGCTCATTGCCCAATGTGCAGAAGAGAATGGCAGTTCAAAGAGTAA
Protein Sequence
- >AT3G05870.6
MKVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE - >AT3G05870.2
MKVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE - >AT3G05870.5
MKVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE - >AT3G05870.3
MKVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE - >AT3G05870.7
MKVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE - >AT3G05870.1
MKVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE - >AT3G05870.4
MKVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE