Information report for AT3G05830
Gene Details
|
|
Functional Descriptions
- GO:0005654 — located in — nucleoplasm
- GO:0009753 — acts upstream of or within — response to jasmonic acid
- GO:0009416 — acts upstream of or within — response to light stimulus
- GO:0010605 — acts upstream of or within — negative regulation of macromolecule metabolic process
- GO:0005515 — enables — protein binding
- GO:0005737 — located in — cytoplasm
- GO:0009620 — acts upstream of or within — response to fungus
- GO:0005635 — located in — nuclear envelope
- GO:0019219 — acts upstream of or within — regulation of nucleobase-containing compound metabolic process
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0010468 — acts upstream of or within — regulation of gene expression
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0006810 — acts upstream of or within — transport
- GO:0098542 — acts upstream of or within — defense response to other organism
- neap1-1/neap3-1 — atneap1 atneap3 double- knockout showed significantly reduced primary root growth from day 2 to day 8 post-germination.
Functional Keywords
Literature and News
Gene Resources
- UniProt: F4J8J0
- EMBL: CP002686
- AlphaFoldDB: F4J8J0
- EnsemblPlants: AT3G05830.2
- Gramene: AT3G05830.2
- ExpressionAtlas: AT3G05830
- InterPro: IPR049932
- PANTHER: PTHR48145, PTHR48145:SF4
- SWISS-MODEL: F4J8J0
Homologs
- Oryza sativa OsIFL;OsIF
Sequences
cDNA Sequence
- >AT3G05830.2
TTTTCGTTGTCTCCTTCTCTTTCTCTCTCTCTCTGGCCAAATAAGCCAATTCATTTATTTCTCATTTATTGGTAATGCATTCGCTTTGATTTCTCTGTTCTTGTAAGATACTTATATAGAAAATGAGATATTAAATTTAGATTCATGCCATAATCAGAGAGATCTGATTTTGAAAACTTAGAAGACCTTTCTTTTTGAAGCTTCAAGTCATAGCTCATAGTTTTGAGATTTGTGATTGCCTCCATGCAAGAGCTGAATTAGCCGAATCTGGATGTCTTATTCTGAAAAAACGACGGTGGATCCACTTCTGAGAGATTTGGATGAGAAGAAAGAGAGTTTCCGGCGAAACGTGGTGTCTCTGGCTACGGAGCTGAAGCAAGTGAGGGGCCGTTTGGTTTCTCAAGAACAATCTTTTCTTAAAGAGACCATTACTAGAAAAGAAGCAGAGAAAAGGGGAAAGAATATGGAAATGGAGATTTGTAAATTGCAGAAGAGACTGGAAGAAAGGAATTGTCAGCTTGAAGCTTCTGCATCTGCTGCTGATAAGTTTATCAAAGAGTTGGAGGAATTTAGATTAAAGCTTGATACAACCAAGCAAACCGCAGAGGCAAGTGCTGATTCTGCTCAATCTACAAAGATCCAATGCTCAATGCTAAAGCAACAACTTGACGACAAAACACGTTCTCTCAGAGAACAAGAAGACCGTATGACTCAGCTTGGTCATCAGCTTGATGATCTACAGAGAGGTCTGAGCTTGAGAGAGTGCTCAGAAAAGCAGCTTAGAGAAGAAGTTAGGAGAATCGAGCGTGAGGTTACTGAGGCCATTGCAAAAGCGGGAATAGGTGGCATGGACAGCGAGCTCCAGAAACTTCTAGAAGATGTGTCTCCAATGAAATTTGAGAGGATGAATAGGCTAGTTGAAGTAAAAGACGAAGAGATTACAAAACTGAAAGATGAGATAAGGTTAATGTCAGGTCAATGGAAACATAAGACTAAGGAACTCGAATCTCAGCTGGAGAAACAGAGAAGAACTGATCAAGATTTGAAGAAGAAGGTATTGAAGCTAGAGTTCTGTTTACAAGAAGCTCGAAGCCAGACAAGAAAGCTGCAGAGGTTTTATTGTTGTTGCTGTTTTGTTATGAATGGAGCACAGAAAGGGGAAAGAAGGGACATGGAGATCAAAGAGATAAGAGATCTTATATCGGAGAAGCAAAACCTTAACAATGAGTCTTGGGATAAACAGAAGTTCTGGGACAATTCAGGGTTCAAGATTGTTGTATCAATGTCTATGTTGATGTTAGTGGTAGTCTCCAAGAGATGATGAATTTTGTAATGTATAAATTTAGTTGCAGATAGTTGATGAGGATAATCTAACTCATGTATGTGTCGTCTTCAGGTCTAATATAACAGCCATGTACTT - >AT3G05830.1
TTTTCGTTGTCTCCTTCTCTTTCTCTCTCTCTCTGGCCAAATAAGCCAATTCATTTATTTCTCATTTATTGGTAATGCATTCGCTTTGATTTCTCTGTTCTTGTAAGATACTTATATAGAAAATGAGATATTAAATTTAGATTCATGCCATAATCAGAGAGATCTGATTTTGAAAACTTAGAAGACCTTTCTTTTTGAAGCTTCAAGTCATAGCTCATAGTTTTGAGATTTGTGATTGCCTCCATGCAAGAGCTGAATTAGCCGAATCTGGATGTCTTATTCTGAAAAAACGACGGTGGATCCACTTCTGAGAGATTTGGATGAGAAGAAAGAGAGTTTCCGGCGAAACGTGGTGTCTCTGGCTACGGAGCTGAAGCAAGTGAGGGGCCGTTTGGTTTCTCAAGAACAATCTTTTCTTAAAGAGACCATTACTAGAAAAGAAGCAGAGAAAAGGGGAAAGAATATGGAAATGGAGATTTGTAAATTGCAGAAGAGACTGGAAGAAAGGAATTGTCAGCTTGAAGCTTCTGCATCTGCTGCTGATAAGTTTATCAAAGAGTTGGAGGAATTTAGATTAAAGCTTGATACAACCAAGCAAACCGCAGAGGCAAGTGCTGATTCTGCTCAATCTACAAAGATCCAATGCTCAATGCTAAAGCAACAACTTGACGACAAAACACGTTCTCTCAGAGAACAAGAAGACCGTATGACTCAGCTTGGTCATCAGCTTGATGATCTACAGAGAGGTCTGAGCTTGAGAGAGTGCTCAGAAAAGCAGCTTAGAGAAGAAGTTAGGAGAATCGAGCGTGAGGTTACTGAGGCCATTGCAAAAGCGGGAATAGGTGGCATGGACAGCGAGCTCCAGAAACTTCTAGAAGATGTGTCTCCAATGAAATTTGAGAGGATGAATAGGCTAGTTGAAGTAAAAGACGAAGAGATTACAAAACTGAAAGATGAGATAAGGTTAATGTCAGGTCAATGGAAACATAAGACTAAGGAACTCGAATCTCAGCTGGAGAAACAGAGAAGAACTGATCAAGATTTGAAGAAGAAGGTATTGAAGCTAGAGTTCTGTTTACAAGAAGCTCGAAGCCAGACAAGAAAGCTGCAGAGGTTTTATTGTTGTTGCTGTTTTGTTATGAATGGAGCACAGAAAGGGGAAAGAAGGGACATGGAGATCAAAGAGATAAGAGATCTTATATCGGAGAAGCAAAACCTTAACAATGAGTCTTGGGATAAACAGAAGTTCTGGGACAATTCAGGGTTCAAGATTGTTGTATCAATGTCTATGTTGATGTTAGTGGTAGTCTCCAAGAGATGATGAATTTTGTAATGTATAAATTTAGTTGCAGATAGTTGATGAGGATAATCTAACTCATGTATGTGTCGTCTTCAGGTCTAATATAACAGCCATGTACTT - >AT3G05830.3
TTTTCGTTGTCTCCTTCTCTTTCTCTCTCTCTCTGGCCAAATAAGCCAATTCATTTATTTCTCATTTATTGGTAATGCATTCGCTTTGATTTCTCTGTTCTTGTAAGATACTTATATAGAAAATGAGATATTAAATTTAGATTCATGCCATAATCAGAGAGATCTGATTTTGAAAACTTAGAAGACCTTTCTTTTTGAAGCTTCAAGTCATAGCTCATAGTTTTGAGATTTGTGATTGCCTCCATGCAAGAGCTGAATTAGCCGAATCTGGATGTCTTATTCTGAAAAAACGACGGTGGATCCACTTCTGAGAGATTTGGATGAGAAGAAAGAGAGTTTCCGGCGAAACGTGGTGTCTCTGGCTACGGAGCTGAAGCAAGTGAGGGGCCGTTTGGTTTCTCAAGAACAATCTTTTCTTAAAGAGACCATTACTAGAAAAGAAGCAGAGAAAAGGGGAAAGAATATGGAAATGGAGATTTGTAAATTGCAGAAGAGACTGGAAGAAAGGAATTGTCAGCTTGAAGCTTCTGCATCTGCTGCTGATAAGTTTATCAAAGAGTTGGAGGAATTTAGATTAAAGCTTGATACAACCAAGCAAACCGCAGAGGCAAGTGCTGATTCTGCTCAATCTACAAAGATCCAATGCTCAATGCTAAAGCAACAACTTGACGACAAAACACGTTCTCTCAGAGAACAAGAAGACCGTATGACTCAGCTTGGTCATCAGCTTGATGATCTACAGAGAGGTCTGAGCTTGAGAGAGTGCTCAGAAAAGCAGCTTAGAGAAGAAGTTAGGAGAATCGAGCGTGAGGTTACTGAGGCCATTGCAAAAGCGGGAATAGGTGGCATGGACAGCGAGCTCCAGAAACTTCTAGAAGATGTGTCTCCAATGAAATTTGAGAGGATGAATAGGCTAGTTGAAGTAAAAGACGAAGAGATTACAAAACTGAAAGATGAGATAAGGTTAATGTCAGGTCAATGGAAACATAAGACTAAGGAACTCGAATCTCAGCTGGAGAAACAGAGAAGAACTGATCAAGATTTGAAGAAGAAGGTATTGAAGCTAGAGTTCTGTTTACAAGAAGCTCGAAGCCAGACAAGAAAGCTGCAGAGGTTTTATTGTTGTTGCTGTTTTGTTATGAATGGAGCACAGAAAGGGGAAAGAAGGGACATGGAGATCAAAGAGATAAGAGATCTTATATCGGAGAAGCAAAACCTTAACAATGAGTCTTGGGATAAACAGAAGTTCTGGGACAATTCAGGGTTCAAGATTGTTGTATCAATGTCTATGTTGATGTTAGTGGTAGTCTCCAAGAGATGATGAATTTTGTAATGTATAAATTTAGTTGCAGATAGTTGATGAGGATAATCTAACTCATGTATGTGTCGTCTTCAGGTCTAATATAACAGCCATGTACTT
CDS Sequence
- >AT3G05830.2
ATGTCTTATTCTGAAAAAACGACGGTGGATCCACTTCTGAGAGATTTGGATGAGAAGAAAGAGAGTTTCCGGCGAAACGTGGTGTCTCTGGCTACGGAGCTGAAGCAAGTGAGGGGCCGTTTGGTTTCTCAAGAACAATCTTTTCTTAAAGAGACCATTACTAGAAAAGAAGCAGAGAAAAGGGGAAAGAATATGGAAATGGAGATTTGTAAATTGCAGAAGAGACTGGAAGAAAGGAATTGTCAGCTTGAAGCTTCTGCATCTGCTGCTGATAAGTTTATCAAAGAGTTGGAGGAATTTAGATTAAAGCTTGATACAACCAAGCAAACCGCAGAGGCAAGTGCTGATTCTGCTCAATCTACAAAGATCCAATGCTCAATGCTAAAGCAACAACTTGACGACAAAACACGTTCTCTCAGAGAACAAGAAGACCGTATGACTCAGCTTGGTCATCAGCTTGATGATCTACAGAGAGGTCTGAGCTTGAGAGAGTGCTCAGAAAAGCAGCTTAGAGAAGAAGTTAGGAGAATCGAGCGTGAGGTTACTGAGGCCATTGCAAAAGCGGGAATAGGTGGCATGGACAGCGAGCTCCAGAAACTTCTAGAAGATGTGTCTCCAATGAAATTTGAGAGGATGAATAGGCTAGTTGAAGTAAAAGACGAAGAGATTACAAAACTGAAAGATGAGATAAGGTTAATGTCAGGTCAATGGAAACATAAGACTAAGGAACTCGAATCTCAGCTGGAGAAACAGAGAAGAACTGATCAAGATTTGAAGAAGAAGGTATTGAAGCTAGAGTTCTGTTTACAAGAAGCTCGAAGCCAGACAAGAAAGCTGCAGAGGTTTTATTGTTGTTGCTGTTTTGTTATGAATGGAGCACAGAAAGGGGAAAGAAGGGACATGGAGATCAAAGAGATAAGAGATCTTATATCGGAGAAGCAAAACCTTAACAATGAGTCTTGGGATAAACAGAAGTTCTGGGACAATTCAGGGTTCAAGATTGTTGTATCAATGTCTATGTTGATGTTAGTGGTAGTCTCCAAGAGATGA - >AT3G05830.1
ATGTCTTATTCTGAAAAAACGACGGTGGATCCACTTCTGAGAGATTTGGATGAGAAGAAAGAGAGTTTCCGGCGAAACGTGGTGTCTCTGGCTACGGAGCTGAAGCAAGTGAGGGGCCGTTTGGTTTCTCAAGAACAATCTTTTCTTAAAGAGACCATTACTAGAAAAGAAGCAGAGAAAAGGGGAAAGAATATGGAAATGGAGATTTGTAAATTGCAGAAGAGACTGGAAGAAAGGAATTGTCAGCTTGAAGCTTCTGCATCTGCTGCTGATAAGTTTATCAAAGAGTTGGAGGAATTTAGATTAAAGCTTGATACAACCAAGCAAACCGCAGAGGCAAGTGCTGATTCTGCTCAATCTACAAAGATCCAATGCTCAATGCTAAAGCAACAACTTGACGACAAAACACGTTCTCTCAGAGAACAAGAAGACCGTATGACTCAGCTTGGTCATCAGCTTGATGATCTACAGAGAGGTCTGAGCTTGAGAGAGTGCTCAGAAAAGCAGCTTAGAGAAGAAGTTAGGAGAATCGAGCGTGAGGTTACTGAGGCCATTGCAAAAGCGGGAATAGGTGGCATGGACAGCGAGCTCCAGAAACTTCTAGAAGATGTGTCTCCAATGAAATTTGAGAGGATGAATAGGCTAGTTGAAGTAAAAGACGAAGAGATTACAAAACTGAAAGATGAGATAAGGTTAATGTCAGGTCAATGGAAACATAAGACTAAGGAACTCGAATCTCAGCTGGAGAAACAGAGAAGAACTGATCAAGATTTGAAGAAGAAGGTATTGAAGCTAGAGTTCTGTTTACAAGAAGCTCGAAGCCAGACAAGAAAGCTGCAGAGGTTTTATTGTTGTTGCTGTTTTGTTATGAATGGAGCACAGAAAGGGGAAAGAAGGGACATGGAGATCAAAGAGATAAGAGATCTTATATCGGAGAAGCAAAACCTTAACAATGAGTCTTGGGATAAACAGAAGTTCTGGGACAATTCAGGGTTCAAGATTGTTGTATCAATGTCTATGTTGATGTTAGTGGTAGTCTCCAAGAGATGA - >AT3G05830.3
ATGTCTTATTCTGAAAAAACGACGGTGGATCCACTTCTGAGAGATTTGGATGAGAAGAAAGAGAGTTTCCGGCGAAACGTGGTGTCTCTGGCTACGGAGCTGAAGCAAGTGAGGGGCCGTTTGGTTTCTCAAGAACAATCTTTTCTTAAAGAGACCATTACTAGAAAAGAAGCAGAGAAAAGGGGAAAGAATATGGAAATGGAGATTTGTAAATTGCAGAAGAGACTGGAAGAAAGGAATTGTCAGCTTGAAGCTTCTGCATCTGCTGCTGATAAGTTTATCAAAGAGTTGGAGGAATTTAGATTAAAGCTTGATACAACCAAGCAAACCGCAGAGGCAAGTGCTGATTCTGCTCAATCTACAAAGATCCAATGCTCAATGCTAAAGCAACAACTTGACGACAAAACACGTTCTCTCAGAGAACAAGAAGACCGTATGACTCAGCTTGGTCATCAGCTTGATGATCTACAGAGAGGTCTGAGCTTGAGAGAGTGCTCAGAAAAGCAGCTTAGAGAAGAAGTTAGGAGAATCGAGCGTGAGGTTACTGAGGCCATTGCAAAAGCGGGAATAGGTGGCATGGACAGCGAGCTCCAGAAACTTCTAGAAGATGTGTCTCCAATGAAATTTGAGAGGATGAATAGGCTAGTTGAAGTAAAAGACGAAGAGATTACAAAACTGAAAGATGAGATAAGGTTAATGTCAGGTCAATGGAAACATAAGACTAAGGAACTCGAATCTCAGCTGGAGAAACAGAGAAGAACTGATCAAGATTTGAAGAAGAAGGTATTGAAGCTAGAGTTCTGTTTACAAGAAGCTCGAAGCCAGACAAGAAAGCTGCAGAGGTTTTATTGTTGTTGCTGTTTTGTTATGAATGGAGCACAGAAAGGGGAAAGAAGGGACATGGAGATCAAAGAGATAAGAGATCTTATATCGGAGAAGCAAAACCTTAACAATGAGTCTTGGGATAAACAGAAGTTCTGGGACAATTCAGGGTTCAAGATTGTTGTATCAATGTCTATGTTGATGTTAGTGGTAGTCTCCAAGAGATGA
Protein Sequence
- >AT3G05830.2
MSYSEKTTVDPLLRDLDEKKESFRRNVVSLATELKQVRGRLVSQEQSFLKETITRKEAEKRGKNMEMEICKLQKRLEERNCQLEASASAADKFIKELEEFRLKLDTTKQTAEASADSAQSTKIQCSMLKQQLDDKTRSLREQEDRMTQLGHQLDDLQRGLSLRECSEKQLREEVRRIEREVTEAIAKAGIGGMDSELQKLLEDVSPMKFERMNRLVEVKDEEITKLKDEIRLMSGQWKHKTKELESQLEKQRRTDQDLKKKVLKLEFCLQEARSQTRKLQRFYCCCCFVMNGAQKGERRDMEIKEIRDLISEKQNLNNESWDKQKFWDNSGFKIVVSMSMLMLVVVSKR - >AT3G05830.1
MSYSEKTTVDPLLRDLDEKKESFRRNVVSLATELKQVRGRLVSQEQSFLKETITRKEAEKRGKNMEMEICKLQKRLEERNCQLEASASAADKFIKELEEFRLKLDTTKQTAEASADSAQSTKIQCSMLKQQLDDKTRSLREQEDRMTQLGHQLDDLQRGLSLRECSEKQLREEVRRIEREVTEAIAKAGIGGMDSELQKLLEDVSPMKFERMNRLVEVKDEEITKLKDEIRLMSGQWKHKTKELESQLEKQRRTDQDLKKKVLKLEFCLQEARSQTRKLQRFYCCCCFVMNGAQKGERRDMEIKEIRDLISEKQNLNNESWDKQKFWDNSGFKIVVSMSMLMLVVVSKR - >AT3G05830.3
MSYSEKTTVDPLLRDLDEKKESFRRNVVSLATELKQVRGRLVSQEQSFLKETITRKEAEKRGKNMEMEICKLQKRLEERNCQLEASASAADKFIKELEEFRLKLDTTKQTAEASADSAQSTKIQCSMLKQQLDDKTRSLREQEDRMTQLGHQLDDLQRGLSLRECSEKQLREEVRRIEREVTEAIAKAGIGGMDSELQKLLEDVSPMKFERMNRLVEVKDEEITKLKDEIRLMSGQWKHKTKELESQLEKQRRTDQDLKKKVLKLEFCLQEARSQTRKLQRFYCCCCFVMNGAQKGERRDMEIKEIRDLISEKQNLNNESWDKQKFWDNSGFKIVVSMSMLMLVVVSKR