Information report for AT3G05800
Gene Details
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Functional Descriptions
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0009742 — acts upstream of or within — brassinosteroid mediated signaling pathway
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0046983 — enables — protein dimerization activity
- GO:0005634 — located in — nucleus
- GO:0003700 — enables — DNA-binding transcription factor activity
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- The Arabidopsis basic/helix-loop-helix transcription factor family. DOI: 10.1105/tpc.013839 ; PMID: 12897250
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana. DOI: 10.1105/tpc.151140 ; PMID: 14600211
- Response diversity of Arabidopsis thaliana ecotypes in elevated [CO2] in the field. DOI: 10.1007/s11103-006-9041-y ; PMID: 16941220
- Putative cold acclimation pathways in Arabidopsis thaliana identified by a combined analysis of mRNA co-expression patterns, promoter motifs and transcription factors. DOI: 10.1186/1471-2164-8-304 ; PMID: 17764576
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Regulation of Arabidopsis brassinosteroid signaling by atypical basic helix-loop-helix proteins. DOI: 10.1105/tpc.109.072504 ; PMID: 20023194
- Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. DOI: 10.1016/j.diff.2010.02.003 ; PMID: 20219281
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
Gene Resources
- UniProt: C0SVA0
- EMBL: AB493603
- AlphaFoldDB: C0SVA0
- EnsemblPlants: AT3G05800.1
- Gramene: AT3G05800.1
- KEGG: ath:AT3G05800
- Orthologous matrix: HKHTKPA
- ExpressionAtlas: AT3G05800
Homologs
- Actinidia chinensis Achn374511
- Brassica napus GSBRNA2T00120105001, GSBRNA2T00057522001
- Brassica oleracea XP_013622118.1, XP_013583782.1
- Brassica rapa XP_009124805.1, XP_009147148.1, XP_009147147.1
- Citrus sinensis orange1.1g035883m
- Ricinus communis 30128.m008923
Sequences
cDNA Sequence
- >AT3G05800.1
CACCAGTTCAATCATAATTGGCCAATGTGATTTTAGACGTACATTATTATTAAAGAAAAATAAATAAAAAATAATGGTATTCAATTCGAAAAACCCAAGAAAATATAGAAAATAATTGATTTAAGGGTGGCTTCTCCAATCTCTCCCAAATGTTTATATATAGAGAATTAGATATCCCCTCCAATTACTCAAAATTATTATCAAAATAAGAAAGAGCTCAACATTGTTCTCTGACTCTATAAATAACTGTTCTTGGAAATTTTCCAAGAGAACAAGAAACAAAAACAAAACGTTGTTTAAGTGTGGTTCTATAGATTTCTTGTGAATGTCTTCTGAACAAGGAAATGGATCGAATCCTTCCACGTCACCGGAGGTAGAAGGGACTAAAACAATCCCCTTTCGCCGGAGATTGCAAAGAGGACAAAGAGTTTTCGCTCCAAAGCTGATGGAGGCTCTACGTCGATCAAGGGTAAGCTCTGAAGAAGCTCCGGTAAGGCATCTTAGTCGTAGATGGAGAGCCACAACGGCGCAGAAGGTATATTCCCTAAAGCTCTACGACGCTCTTCAACGATCGCGGCGGAGCGCAACAGTCCGGGACACGGCCGACAAAGTCCTTGCGACGACCGCTCGTGGTGCAACTCGGTGGAGCCGAGCCATTTTGGTTAGTCGATTCGGAACGAGTCTGAGGCGGCGTAGGAATACCAAACCGGCGTCGGCATTAGCTGCGGCGATCAGGGGAAGTGGTGGAAGTGGGAGGAGGAGGAAGTTATCGGCGGTGGGAAATCGGGTCCGGGTTTTGGGTGGGTTGGTGCCGGGTTGCCGGAGAACGGCGTTACCGGAGCTTTTGGACGAGACAGCAGATTACATAGCGGCTTTGGAAATGCAAGTCCGAGCCATGACAGCTCTATCAAAGATTCTGTCGGAGCTTCAGCCGTCTACTAATCTCGGCTCGGCTTTATAGCCGAGTGTATAAGCCGATGAATTTGTTTCAATTAATTCTTTTACGATTTTATCGTGGGAATGTCTTATTGTTTTTAATGATTTGTTTGCCCTGGAAAAAAAAAATTGTCAAAATCATCACGAGTTGGACGAAAATACTATGTTTTTCTAAAAACCTTATAATAGGATTCGAAATATTTTGGTGTCGTTTCACAAGTTTGAATTGTAAATATTTTCTAAGAAAATGAAATTTCTAAAAAAAAATTTGAATATAAT
CDS Sequence
- >AT3G05800.1
ATGTCTTCTGAACAAGGAAATGGATCGAATCCTTCCACGTCACCGGAGGTAGAAGGGACTAAAACAATCCCCTTTCGCCGGAGATTGCAAAGAGGACAAAGAGTTTTCGCTCCAAAGCTGATGGAGGCTCTACGTCGATCAAGGGTAAGCTCTGAAGAAGCTCCGGTAAGGCATCTTAGTCGTAGATGGAGAGCCACAACGGCGCAGAAGGTATATTCCCTAAAGCTCTACGACGCTCTTCAACGATCGCGGCGGAGCGCAACAGTCCGGGACACGGCCGACAAAGTCCTTGCGACGACCGCTCGTGGTGCAACTCGGTGGAGCCGAGCCATTTTGGTTAGTCGATTCGGAACGAGTCTGAGGCGGCGTAGGAATACCAAACCGGCGTCGGCATTAGCTGCGGCGATCAGGGGAAGTGGTGGAAGTGGGAGGAGGAGGAAGTTATCGGCGGTGGGAAATCGGGTCCGGGTTTTGGGTGGGTTGGTGCCGGGTTGCCGGAGAACGGCGTTACCGGAGCTTTTGGACGAGACAGCAGATTACATAGCGGCTTTGGAAATGCAAGTCCGAGCCATGACAGCTCTATCAAAGATTCTGTCGGAGCTTCAGCCGTCTACTAATCTCGGCTCGGCTTTATAG
Protein Sequence
- >AT3G05800.1
MSSEQGNGSNPSTSPEVEGTKTIPFRRRLQRGQRVFAPKLMEALRRSRVSSEEAPVRHLSRRWRATTAQKVYSLKLYDALQRSRRSATVRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRRRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPSTNLGSAL