Information report for AT3G05700
Gene Details
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Functional Descriptions
- GO:0009651 — acts upstream of or within — response to salt stress
- GO:0045893 — acts upstream of or within — positive regulation of DNA-templated transcription
- GO:0003677 — enables — DNA binding
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0005634 — located in — nucleus
- GO:0009414 — acts upstream of or within — response to water deprivation
- SALK_107634C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:decreased,salt stress:no change,ABA:no change,hypoxia:no change.
Functional Keywords
Literature and News
- Refined annotation of the Arabidopsis genome by complete expressed sequence tag mapping. DOI: 10.1104/pp.102.018101 ; PMID: 12805580
- Identification, characterization and molecular phylogeny of U12-dependent introns in the Arabidopsis thaliana genome. DOI: 10.1093/nar/gkg492 ; PMID: 12888517
- The Arabidopsis AtDi19 gene family encodes a novel type of Cys2/His2 zinc-finger protein implicated in ABA-independent dehydration, high-salinity stress and light signaling pathways. DOI: 10.1007/s11103-005-5798-7 ; PMID: 16786289
Gene Resources
- UniProt: A0A1I9LRR2
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LRR2
- EnsemblPlants: AT3G05700.2
- Gramene: AT3G05700.2
- ExpressionAtlas: AT3G05700
- InterPro: IPR008598, IPR027935, IPR033347
- PANTHER: PTHR31875, PTHR31875:SF26
Sequences
cDNA Sequence
- >AT3G05700.2
ATAATTTATAGAACTTGTCTCCTCTGTCTCTCACTCTCTATCCAAAATTAATTAAAACGAGGAGAAGAAGAAAAAAAGAAAGACAAAACTTTGTTAATAAACCGACCCAGAATCGTGGTCTTCATAATCTGTCTTTACCATTTTCGTTGGATTTCTTCAGACAGTAATCAGAATCATTTACTTTCGTATACAGATTCATTTTCTTCAAAACGTTTTATTTGTTAAGGAAAAAAGTACAAAACTTTCGACTTTTGTTTTCCGGGTTTTGTCAATAATGGATTCCGATTCATGGAGTGATCGTCTCGCTTCAGCTACGAGGAGATACCAGCTAGCTTTTCCATCACGATCTGATACATTCTTAGGGTTTGAAGAGATAGATGGAGAAGAAGAGTTCAGGGAAGAGTTTGCTTGCCCTTTCTGTTCTGACTATTTTGATATTGTCTCTCTCTGCTGCCACATAGATGAAGATCATCCTATGGAAGCCAAAAATGGGGTATGTCCAGTTTGTGCGGTTAGGGTGGGTGTTGACATGGTTGCTCATATAACCCTTCAGCACGCTAATATTTTCAAGATGCACCGCAAGAGAAAACCAAGAAGAGGCGGGTCATATTCCACATTATCGATCTTAAGGAGAGAGTTTCCTGATGGAAACTTTCAGAGCCTCTTTGGAGGATCTTCGTGTATAGTATCGTCTTCCTCATCATCCAATGTAGCTGCTGACCCATTGTTATCGTCGTTCATTTCTCCTATTGCTGATGGGTTCTTCACCACGGAGTCATGCATATCTGCAGAAACGGGTCCTGTCAAGAAAACAACTATTCAGTGTTTACCCGAACAGTATGCTTACTTCTTCTCAATCATTTTACTTTGCCTAACCTCTTGTTAGTAAAAATCTGGTATTTCAAGACTGATTGAACCTAGATGATTCTAGGTTATTTTAAGTGTTTGGTCTATAACTTTCCATTGGAACATTTGCTTCAATGTTTTACTTTTGGGCACACTTGGGATTTATGAGCCAAACTGAAACTCTTTGATCAAGTTGAGTTCTTATACCCATATAGGACATGTATGGATCACTGATGAAGGTTTTGTGGATGATAGGAATGCGAAAAAAACTTCTCTTTCAGCTGAGGATCACAAGCAGAAGTTGAAACGCAGTGAGTTTGTTCGAGAGCTATTGAGCTCTACGATTCTTGATGACAGCTTATAATGGAGTATCGCTTCTGGTAACTTGTCAGCAATGAGGAAACTCCATGTTCTGTCTCAGCAGGACAAAGTACGAAATTATTGTTTGTGGGGAGCAAATAAAGGAGAGAGATTATGAATGAGTGTAACCTAAGAACACATTAGCTTCTGCGGTTAACGCCCCAATTGCTTGTAGGTCATGAGAAAAAAAACAAAAATGTATGTATTTCACGTATTCGCGTTCAATTATTCGTTTCCAGTTGTTTACTAGGATAAGAATGACCATATATGTTGAAAATTTGTCATGGAAACGGCTTCAGATTTTGTAGAGGCACATTCTTCTGCAATCAGATTTATAGCTTTATTATAGTTTCTGAAGCTCGTTAGTCGTTAAGCTGGGGTATCCCCAAACTAATCAACAACGAGACAAAATTACACCATTTACTGATTGTGATTATCGAAAAACTTAGACACTGAAAAGATATGGTAGGGGCTGCGCGAACGCAAACCCCCGCTGCCACAAATAATGACGTAGGCTCTTCCTCTAGGGAAGACCTTAAGCATAGCACCCTCCCGGTATGTGCAATGGGAGTCACTAGCCTAGGCCACTCGTCTTCTTGATCGCGAGTTGACCCCGTCC - >AT3G05700.1
ATAATTTATAGAACTTGTCTCCTCTGTCTCTCACTCTCTATCCAAAATTAATTAAAACGAGGAGAAGAAGAAAAAAAGAAAGACAAAACTTTGTTAATAAACCGACCCAGAATCGTGGTCTTCATAATCTGTCTTTACCATTTTCGTTGGATTTCTTCAGACAGTAATCAGAATCATTTACTTTCGTATACAGATTCATTTTCTTCAAAACGTTTTATTTGTTAAGGAAAAAAGTACAAAACTTTCGACTTTTGTTTTCCGGGTTTTGTCAATAATGGATTCCGATTCATGGAGTGATCGTCTCGCTTCAGCTACGAGGAGATACCAGCTAGCTTTTCCATCACGATCTGATACATTCTTAGGGTTTGAAGAGATAGATGGAGAAGAAGAGTTCAGGGAAGAGTTTGCTTGCCCTTTCTGTTCTGACTATTTTGATATTGTCTCTCTCTGCTGCCACATAGATGAAGATCATCCTATGGAAGCCAAAAATGGGGTATGTCCAGTTTGTGCGGTTAGGGTGGGTGTTGACATGGTTGCTCATATAACCCTTCAGCACGCTAATATTTTCAAGATGCACCGCAAGAGAAAACCAAGAAGAGGCGGGTCATATTCCACATTATCGATCTTAAGGAGAGAGTTTCCTGATGGAAACTTTCAGAGCCTCTTTGGAGGATCTTCGTGTATAGTATCGTCTTCCTCATCATCCAATGTAGCTGCTGACCCATTGTTATCGTCGTTCATTTCTCCTATTGCTGATGGGTTCTTCACCACGGAGTCATGCATATCTGCAGAAACGGGTCCTGTCAAGAAAACAACTATTCAGTGTTTACCCGAACAGTATGCTTACTTCTTCTCAATCATTTTACTTTGCCTAACCTCTTGTTAGTAAAAATCTGGTATTTCAAGACTGATTGAACCTAGATGATTCTAGGTTATTTTAAGTGTTTGGTCTATAACTTTCCATTGGAACATTTGCTTCAATGTTTTACTTTTGGGCACACTTGGGATTTATGAGCCAAACTGAAACTCTTTGATCAAGTTGAGTTCTTATACCCATATAGGACATGTATGGATCACTGATGAAGGTTTTGTGGATGATAGGAATGCGAAAAAAACTTCTCTTTCAGCTGAGGATCACAAGCAGAAGTTGAAACGCAGTGAGTTTGTTCGAGAGCTATTGAGCTCTACGATTCTTGATGACAGCTTATAATGGAGTATCGCTTCTGGTAACTTGTCAGCAATGAGGAAACTCCATGTTCTGTCTCAGCAGGACAAAGTACGAAATTATTGTTTGTGGGGAGCAAATAAAGGAGAGAGATTATGAATGAGTGTAACCTAAGAACACATTAGCTTCTGCGGTTAACGCCCCAATTGCTTGTAGGTCATGAGAAAAAAAACAAAAATGTATGTATTTCACGTATTCGCGTTCAATTATTCGTTTCCAGTTGTTTACTAGGATAAGAATGACCATATATGTTGAAAATTTGTCATGGAAACGGCTTCAGATTTTGTAGAGGCACATTCTTCTGCAATCAGATTTATAGCTTTATTATAGTTTCTGAAGCTCGTTAGTCGTTAAGCTGGGGTATCCCCAAACTAATCAACAACGAGACAAAATTACACCATTTACTGATTGTGATTATCGAAAAACTTAGACACTGAAAAGATATGGTAGGGGCTGCGCGAACGCAAACCCCCGCTGCCACAAATAATGACGTAGGCTCTTCCTCTAGGGAAGACCTTAAGCATAGCACCCTCCCGGTATGTGCAATGGGAGTCACTAGCCTAGGCCACTCGTCTTCTTGATCGCGAGTTGACCCCGTCC
CDS Sequence
- >AT3G05700.2
ATGGATTCCGATTCATGGAGTGATCGTCTCGCTTCAGCTACGAGGAGATACCAGCTAGCTTTTCCATCACGATCTGATACATTCTTAGGGTTTGAAGAGATAGATGGAGAAGAAGAGTTCAGGGAAGAGTTTGCTTGCCCTTTCTGTTCTGACTATTTTGATATTGTCTCTCTCTGCTGCCACATAGATGAAGATCATCCTATGGAAGCCAAAAATGGGGTATGTCCAGTTTGTGCGGTTAGGGTGGGTGTTGACATGGTTGCTCATATAACCCTTCAGCACGCTAATATTTTCAAGATGCACCGCAAGAGAAAACCAAGAAGAGGCGGGTCATATTCCACATTATCGATCTTAAGGAGAGAGTTTCCTGATGGAAACTTTCAGAGCCTCTTTGGAGGATCTTCGTGTATAGTATCGTCTTCCTCATCATCCAATGTAGCTGCTGACCCATTGTTATCGTCGTTCATTTCTCCTATTGCTGATGGGTTCTTCACCACGGAGTCATGCATATCTGCAGAAACGGGTCCTGTCAAGAAAACAACTATTCAGTGTTTACCCGAACAGTATGCTTACTTCTTCTCAATCATTTTACTTTGCCTAACCTCTTGTTAG - >AT3G05700.1
ATGGATTCCGATTCATGGAGTGATCGTCTCGCTTCAGCTACGAGGAGATACCAGCTAGCTTTTCCATCACGATCTGATACATTCTTAGGGTTTGAAGAGATAGATGGAGAAGAAGAGTTCAGGGAAGAGTTTGCTTGCCCTTTCTGTTCTGACTATTTTGATATTGTCTCTCTCTGCTGCCACATAGATGAAGATCATCCTATGGAAGCCAAAAATGGGGTATGTCCAGTTTGTGCGGTTAGGGTGGGTGTTGACATGGTTGCTCATATAACCCTTCAGCACGCTAATATTTTCAAGATGCACCGCAAGAGAAAACCAAGAAGAGGCGGGTCATATTCCACATTATCGATCTTAAGGAGAGAGTTTCCTGATGGAAACTTTCAGAGCCTCTTTGGAGGATCTTCGTGTATAGTATCGTCTTCCTCATCATCCAATGTAGCTGCTGACCCATTGTTATCGTCGTTCATTTCTCCTATTGCTGATGGGTTCTTCACCACGGAGTCATGCATATCTGCAGAAACGGGTCCTGTCAAGAAAACAACTATTCAGTGTTTACCCGAACAGTATGCTTACTTCTTCTCAATCATTTTACTTTGCCTAACCTCTTGTTAG
Protein Sequence
- >AT3G05700.2
MDSDSWSDRLASATRRYQLAFPSRSDTFLGFEEIDGEEEFREEFACPFCSDYFDIVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGGSYSTLSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFISPIADGFFTTESCISAETGPVKKTTIQCLPEQYAYFFSIILLCLTSC - >AT3G05700.1
MDSDSWSDRLASATRRYQLAFPSRSDTFLGFEEIDGEEEFREEFACPFCSDYFDIVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGGSYSTLSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFISPIADGFFTTESCISAETGPVKKTTIQCLPEQYAYFFSIILLCLTSC