Information report for AT3G05690
Gene Details
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Functional Descriptions
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0006357 — involved in — regulation of transcription by RNA polymerase II
- GO:0045893 — involved in — positive regulation of DNA-templated transcription
- GO:0000981 — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0009567 — acts upstream of or within — double fertilization forming a zygote and endosperm
- GO:0005634 — located in — nucleus
- GO:0009408 — involved in — response to heat
- GO:0016602 — part of — CCAAT-binding factor complex
Functional Keywords
Literature and News
- Multiple genes encoding the conserved CCAAT-box transcription factor complex are expressed in Arabidopsis. DOI: 10.1104/pp.117.3.1015 ; PMID: 9662544
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- A CDC45 homolog in Arabidopsis is essential for meiosis, as shown by RNA interference-induced gene silencing. DOI: 10.1105/tpc.016865 ; PMID: 14660803
- Transcriptome profiling of the response of Arabidopsis suspension culture cells to Suc starvation. DOI: 10.1104/pp.104.044362 ; PMID: 15310832
- Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. DOI: 10.1242/dev.01595 ; PMID: 15634699
- SERRATE: a new player on the plant microRNA scene. DOI: 10.1038/sj.embor.7400806 ; PMID: 16977334
- Genome-wide analysis of the Arabidopsis leaf transcriptome reveals interaction of phosphate and sugar metabolism. DOI: 10.1104/pp.106.090167 ; PMID: 17085508
- Global transcription profiling reveals differential responses to chronic nitrogen stress and putative nitrogen regulatory components in Arabidopsis. DOI: 10.1186/1471-2164-8-281 ; PMID: 17705847
- Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA. DOI: 10.1007/s11103-007-9241-0 ; PMID: 17885809
- Functional and transcriptome analysis reveals an acclimatization strategy for abiotic stress tolerance mediated by Arabidopsis NF-YA family members. DOI: 10.1371/journal.pone.0048138 ; PMID: 23118940
- Stress-induced early flowering is mediated by miR169 in Arabidopsis thaliana. DOI: 10.1093/jxb/ert353 ; PMID: 24336445
- A miR169 isoform regulates specific NF-YA targets and root architecture in Arabidopsis. DOI: 10.1111/nph.12735 ; PMID: 24533947
- Arabidopsis DPB3-1, a DREB2A interactor, specifically enhances heat stress-induced gene expression by forming a heat stress-specific transcriptional complex with NF-Y subunits. DOI: 10.1105/tpc.114.132928 ; PMID: 25490919
- The Arabidopsis thaliana Nuclear Factor Y Transcription Factors. DOI: 10.3389/fpls.2016.02045 ; PMID: 28119722
- Possible Role of MADS AFFECTING FLOWERING 3 and B-BOX DOMAIN PROTEIN 19 in Flowering Time Regulation of Arabidopsis Mutants with Defects in Nonsense-Mediated mRNA Decay. DOI: 10.3389/fpls.2017.00191 ; PMID: 28261246
- Transcription factors NF-YA2 and NF-YA10 regulate leaf growth via auxin signaling in Arabidopsis. DOI: 10.1038/s41598-017-01475-z ; PMID: 28469131
- Ambient temperature regulates the expression of a small set of sRNAs influencing plant development through NF-YA2 and YUC2. DOI: 10.1111/pce.13355 ; PMID: 29856891
- Ascophyllum nodosum extract mitigates salinity stress in Arabidopsis thaliana by modulating the expression of miRNA involved in stress tolerance and nutrient acquisition. DOI: 10.1371/journal.pone.0206221 ; PMID: 30372454
- Arabidopsis NUCLEAR FACTOR Y A8 inhibits the juvenile-to-adult transition by activating transcription of MIR156s. DOI: 10.1093/jxb/eraa197 ; PMID: 32445333
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- AtHAP3b plays a crucial role in the regulation of flowering time in Arabidopsis during osmotic stress. DOI: 10.5483/bmbrep.2007.40.6.1083 ; PMID: 18047807
- Identification and characterization of carrot HAP factors that form a complex with the embryo-specific transcription factor C-LEC1. DOI: 10.1093/jxb/erm238 ; PMID: 18057048
Gene Resources
- UniProt: A0A1I9LSX7
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LSX7
- EnsemblPlants: AT3G05690.2
- Gramene: AT3G05690.2
- ExpressionAtlas: AT3G05690
- InterPro: IPR001289
- PANTHER: PTHR12632
- PROSITE: PS51152
- Gene3D: 6.10.250.2430
Homologs
- Brassica napus GSBRNA2T00111892001, GSBRNA2T00084442001, GSBRNA2T00005976001
- Brassica oleracea XP_013625433.1, XP_013625432.1, XP_013639374.1, XP_013639369.1, XP_013639364.1, XP_013639362.1, XP_013639359.1
- Brassica rapa XP_009134849.1, XP_009124866.1, XP_009124865.1, XP_009124864.1
Sequences
cDNA Sequence
- >AT3G05690.2
GTACGTCTCTCTCTTCTCTTTCTCTCTCTCCCTACTAAATACTAATGTGTGTGAATGAATCTCTGTTTCTTGTTTTGGAACCGAGATGGCTTCCTAACAATTGGGCTTTTCTCTGCCTCTTCCTAGGAATCTGAAGCTCTTCTCTACTCTCTACTCTATCACTCCATCTGTGTAAGTTTTACTCAACCTCTTTCTCTTTTTTTCTTTGCTTTATTCTTTTAGATTCACATAGGTTTTCGTGTGTTTGATTTTGACCAACATTTGGGATTTTATTTTACTTCTTTTTGGAGTTTGTTTGCTATTGGGGATCTCTAGTCTGTGAAAAAGATTTCAGTTCTTGCGTCTTATCTTCTCGTTTCACACAATCTTTTTTTCTTACTTTAGACAACAAGTCTGTCTCTTGATGATGATTCACATATGGGTTTTGTCATTCGTGTGGTTTTGCGTAATACCCAATCCCAAAGAACATATCTTTCTTATTCTTCTAGGCACTATCTATTTTTCACTTTTTGTAATTGGAATTTGGAGATGGCTATGCAAACTGTGAGAGAAGGTCTCTTCTCTGCTCCACAGACTTCTTGGTGGACTGCTTTTGGATCTCAGCCGTTGGCTCCGGAGAGTCTCGCCGGCGATTCTGACTCATTCGCCGGAGTTAAGGTCGGATCTGTCGGAGAGACAGGACAACGTGTGGATAAACAGAGCAACTCTGCAACGCACTTAGCTTTCTCACTTGGTGATGTAAAGAGTCCAAGACTTGTGCCAAAGCCTCATGGAGCTACTTTCTCAATGCAATCACCTTGCTTGGAACTTGGATTTTCTCAGCCACCGATCTATACAAAGTATCCCTATGGAGAACAACAATACTATGGAGTTGTTTCAGCCTATGGATCTCAGAGCAGGGTAATGCTTCCTCTAAACATGGAAACGGAAGATAGTACCATCTATGTGAACTCAAAGCAATACCATGGAATCATAAGGAGACGCCAATCCCGCGCAAAGGCTGCTGCTGTTCTTGATCAGAAGAAATTGAGTAGTAGATGCCGCAAGCCATATATGCATCATTCGCGCCATCTCCATGCATTGCGGCGTCCTAGAGGATCCGGTGGGAGATTCTTGAACACTAAAAGTCAGAACTTGGAAAATAGCGGAACCAATGCAAAGAAAGGTGATGGAAGTATGCAGATTCAGTCTCAGCCTAAGCCTCAGCAAAGTAACTCTCAGAATTCTGAAGTTGTTCATCCGGAAAACGGGACCATGAACTTATCGAACGGATTAAATGTGTCGGGATCAGAAGTTACTAGCATGAACTACTTCCTAAGTTCTCCCGTTCATTCTCTTGGTGGCATGGTAATGCCTAGCAAGTGGATAGCAGCAGCAGCAGCAATGGATAATGGCTGCTGCAATTTCAAAACCTGATCCTTTACCGTTTCACAGTCAAACGGAGAGAGATAAAGAACTCTTGCCTTGGTATAAAGGATTTTCCTTTTTGCCAATCCGCTTTGGCTGTGAACAGGCAAATCATCTTTGGCTCATTCTCTATTAAGGTAACTTCGCCGTGAGGTGAAAAAAGCTTTGATATATTTATCTTCAGTGTAAAAGTAGTTAAAACTGGTGAAGAACAATGATGTGTTTGGTCACTAAACCCACTTGTTCCAACTAGTAGTGTGTGTTTTAAGAAAACTCTGTTATCTGATTTTGTAGCTCTCTCTGGCTTTGTGTGTTTCTCAAACAACTGTAACAACTTTTAAGTTATGTGGTTTATGTAACATATTTAAGACCTGTGTTTTTGTATATTTGGTCGAATTTATGTTATTATTTGCTTATTATCCAGGAC - >AT3G05690.1
GTACGTCTCTCTCTTCTCTTTCTCTCTCTCCCTACTAAATACTAATGTGTGTGAATGAATCTCTGTTTCTTGTTTTGGAACCGAGATGGCTTCCTAACAATTGGGCTTTTCTCTGCCTCTTCCTAGGAATCTGAAGCTCTTCTCTACTCTCTACTCTATCACTCCATCTGTGTAAGTTTTACTCAACCTCTTTCTCTTTTTTTCTTTGCTTTATTCTTTTAGATTCACATAGGTTTTCGTGTGTTTGATTTTGACCAACATTTGGGATTTTATTTTACTTCTTTTTGGAGTTTGTTTGCTATTGGGGATCTCTAGTCTGTGAAAAAGATTTCAGTTCTTGCGTCTTATCTTCTCGTTTCACACAATCTTTTTTTCTTACTTTAGACAACAAGTCTGTCTCTTGATGATGATTCACATATGGGTTTTGTCATTCGTGTGGTTTTGCGTAATACCCAATCCCAAAGAACATATCTTTCTTATTCTTCTAGGCACTATCTATTTTTCACTTTTTGTAATTGGAATTTGGAGATGGCTATGCAAACTGTGAGAGAAGGTCTCTTCTCTGCTCCACAGACTTCTTGGTGGACTGCTTTTGGATCTCAGCCGTTGGCTCCGGAGAGTCTCGCCGGCGATTCTGACTCATTCGCCGGAGTTAAGGTCGGATCTGTCGGAGAGACAGGACAACGTGTGGATAAACAGAGCAACTCTGCAACGCACTTAGCTTTCTCACTTGGTGATGTAAAGAGTCCAAGACTTGTGCCAAAGCCTCATGGAGCTACTTTCTCAATGCAATCACCTTGCTTGGAACTTGGATTTTCTCAGCCACCGATCTATACAAAGTATCCCTATGGAGAACAACAATACTATGGAGTTGTTTCAGCCTATGGATCTCAGAGCAGGGTAATGCTTCCTCTAAACATGGAAACGGAAGATAGTACCATCTATGTGAACTCAAAGCAATACCATGGAATCATAAGGAGACGCCAATCCCGCGCAAAGGCTGCTGCTGTTCTTGATCAGAAGAAATTGAGTAGTAGATGCCGCAAGCCATATATGCATCATTCGCGCCATCTCCATGCATTGCGGCGTCCTAGAGGATCCGGTGGGAGATTCTTGAACACTAAAAGTCAGAACTTGGAAAATAGCGGAACCAATGCAAAGAAAGGTGATGGAAGTATGCAGATTCAGTCTCAGCCTAAGCCTCAGCAAAGTAACTCTCAGAATTCTGAAGTTGTTCATCCGGAAAACGGGACCATGAACTTATCGAACGGATTAAATGTGTCGGGATCAGAAGTTACTAGCATGAACTACTTCCTAAGTTCTCCCGTTCATTCTCTTGGTGGCATGGTAATGCCTAGCAAGTGGATAGCAGCAGCAGCAGCAATGGATAATGGCTGCTGCAATTTCAAAACCTGATCCTTTACCGTTTCACAGTCAAACGGAGAGAGATAAAGAACTCTTGCCTTGGTATAAAGGATTTTCCTTTTTGCCAATCCGCTTTGGCTGTGAACAGGCAAATCATCTTTGGCTCATTCTCTATTAAGGTAACTTCGCCGTGAGGTGAAAAAAGCTTTGATATATTTATCTTCAGTGTAAAAGTAGTTAAAACTGGTGAAGAACAATGATGTGTTTGGTCACTAAACCCACTTGTTCCAACTAGTAGTGTGTGTTTTAAGAAAACTCTGTTATCTGATTTTGTAGCTCTCTCTGGCTTTGTGTGTTTCTCAAACAACTGTAACAACTTTTAAGTTATGTGGTTTATGTAACATATTTAAGACCTGTGTTTTTGTATATTTGGTCGAATTTATGTTATTATTTGCTTATTATCCAGGAC
CDS Sequence
- >AT3G05690.2
ATGGGTTTTGTCATTCGTGTGGTTTTGCGTAATACCCAATCCCAAAGAACATATCTTTCTTATTCTTCTAGGCACTATCTATTTTTCACTTTTTGTAATTGGAATTTGGAGATGGCTATGCAAACTGTGAGAGAAGGTCTCTTCTCTGCTCCACAGACTTCTTGGTGGACTGCTTTTGGATCTCAGCCGTTGGCTCCGGAGAGTCTCGCCGGCGATTCTGACTCATTCGCCGGAGTTAAGGTCGGATCTGTCGGAGAGACAGGACAACGTGTGGATAAACAGAGCAACTCTGCAACGCACTTAGCTTTCTCACTTGGTGATGTAAAGAGTCCAAGACTTGTGCCAAAGCCTCATGGAGCTACTTTCTCAATGCAATCACCTTGCTTGGAACTTGGATTTTCTCAGCCACCGATCTATACAAAGTATCCCTATGGAGAACAACAATACTATGGAGTTGTTTCAGCCTATGGATCTCAGAGCAGGGTAATGCTTCCTCTAAACATGGAAACGGAAGATAGTACCATCTATGTGAACTCAAAGCAATACCATGGAATCATAAGGAGACGCCAATCCCGCGCAAAGGCTGCTGCTGTTCTTGATCAGAAGAAATTGAGTAGTAGATGCCGCAAGCCATATATGCATCATTCGCGCCATCTCCATGCATTGCGGCGTCCTAGAGGATCCGGTGGGAGATTCTTGAACACTAAAAGTCAGAACTTGGAAAATAGCGGAACCAATGCAAAGAAAGGTGATGGAAGTATGCAGATTCAGTCTCAGCCTAAGCCTCAGCAAAGTAACTCTCAGAATTCTGAAGTTGTTCATCCGGAAAACGGGACCATGAACTTATCGAACGGATTAAATGTGTCGGGATCAGAAGTTACTAGCATGAACTACTTCCTAAGTTCTCCCGTTCATTCTCTTGGTGGCATGGTAATGCCTAGCAAGTGGATAGCAGCAGCAGCAGCAATGGATAATGGCTGCTGCAATTTCAAAACCTGA - >AT3G05690.1
ATGGGTTTTGTCATTCGTGTGGTTTTGCGTAATACCCAATCCCAAAGAACATATCTTTCTTATTCTTCTAGGCACTATCTATTTTTCACTTTTTGTAATTGGAATTTGGAGATGGCTATGCAAACTGTGAGAGAAGGTCTCTTCTCTGCTCCACAGACTTCTTGGTGGACTGCTTTTGGATCTCAGCCGTTGGCTCCGGAGAGTCTCGCCGGCGATTCTGACTCATTCGCCGGAGTTAAGGTCGGATCTGTCGGAGAGACAGGACAACGTGTGGATAAACAGAGCAACTCTGCAACGCACTTAGCTTTCTCACTTGGTGATGTAAAGAGTCCAAGACTTGTGCCAAAGCCTCATGGAGCTACTTTCTCAATGCAATCACCTTGCTTGGAACTTGGATTTTCTCAGCCACCGATCTATACAAAGTATCCCTATGGAGAACAACAATACTATGGAGTTGTTTCAGCCTATGGATCTCAGAGCAGGGTAATGCTTCCTCTAAACATGGAAACGGAAGATAGTACCATCTATGTGAACTCAAAGCAATACCATGGAATCATAAGGAGACGCCAATCCCGCGCAAAGGCTGCTGCTGTTCTTGATCAGAAGAAATTGAGTAGTAGATGCCGCAAGCCATATATGCATCATTCGCGCCATCTCCATGCATTGCGGCGTCCTAGAGGATCCGGTGGGAGATTCTTGAACACTAAAAGTCAGAACTTGGAAAATAGCGGAACCAATGCAAAGAAAGGTGATGGAAGTATGCAGATTCAGTCTCAGCCTAAGCCTCAGCAAAGTAACTCTCAGAATTCTGAAGTTGTTCATCCGGAAAACGGGACCATGAACTTATCGAACGGATTAAATGTGTCGGGATCAGAAGTTACTAGCATGAACTACTTCCTAAGTTCTCCCGTTCATTCTCTTGGTGGCATGGTAATGCCTAGCAAGTGGATAGCAGCAGCAGCAGCAATGGATAATGGCTGCTGCAATTTCAAAACCTGA
Protein Sequence
- >AT3G05690.2
MGFVIRVVLRNTQSQRTYLSYSSRHYLFFTFCNWNLEMAMQTVREGLFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNSATHLAFSLGDVKSPRLVPKPHGATFSMQSPCLELGFSQPPIYTKYPYGEQQYYGVVSAYGSQSRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQNSEVVHPENGTMNLSNGLNVSGSEVTSMNYFLSSPVHSLGGMVMPSKWIAAAAAMDNGCCNFKT - >AT3G05690.1
MGFVIRVVLRNTQSQRTYLSYSSRHYLFFTFCNWNLEMAMQTVREGLFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNSATHLAFSLGDVKSPRLVPKPHGATFSMQSPCLELGFSQPPIYTKYPYGEQQYYGVVSAYGSQSRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQNSEVVHPENGTMNLSNGLNVSGSEVTSMNYFLSSPVHSLGGMVMPSKWIAAAAAMDNGCCNFKT