Information report for AT3G05630
Gene Details
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Functional Descriptions
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0009049 — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)
- PO:0006079 — shoot system meristem — meristema del epiblasto (epiblastema) (Spanish, exact), シュート分裂組織 (Japanese, exact)
- PO:0006085 — root meristem — meristema de la raíz (Spanish, exact), 根分裂組織 (Japanese, exact), meristematic zone (related)
- PO:0009015 — portion of vascular tissue — porción de tejido vascular (Spanish, exact), vascular tissue (exact), 維管束細胞の一部 (Japanese, exact), vascular system (related)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- SALK_119084 — Less sensitive to auxin. Reduced root gravitropism. Suppressed auxin-dependent hypocotyl elongation at 29C.
- pldz2 — mutant is defective in the hydrolysis of phospholipids and has a reduced capacity to accumulate galactolipids under limiting Pi conditions. Morphological analysis of the pldz2 root system shows a premature change in root architecture in response to Pi starvation.
- pldzeta1 — No visible phenotype.
- pldzeta1 pldzeta2 — Under limited phosphate, primary root elongation is retarded and lateral roots are longer with respect to wild type.
Functional Keywords
- fruit , root , vascular leaf , flower , stem , inflorescence , shoot system meristem , root meristem , root , portion of vascular tissue , vascular leaf , cotyledon , hypocotyl
Literature and News
- The Arabidopsis phospholipase D family. Characterization of a calcium-independent and phosphatidylcholine-selective PLD zeta 1 with distinct regulatory domains. DOI: 10.1104/pp.010928 ; PMID: 11891260
- Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. DOI: 10.1002/pmic.200300607 ; PMID: 14760709
- DNA chip-based expression profile analysis indicates involvement of the phosphatidylinositol signaling pathway in multiple plant responses to hormone and abiotic treatments. DOI: 10.1038/sj.cr.7290200 ; PMID: 15040888
- ABA activates ADPR cyclase and cADPR induces a subset of ABA-responsive genes in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02055.x ; PMID: 15086800
- Learning the lipid language of plant signalling. DOI: 10.1016/j.tplants.2004.06.008 ; PMID: 15358268
- The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. DOI: 10.1104/pp.105.068171 ; PMID: 16258011
- Double knockouts of phospholipases Dzeta1 and Dzeta2 in Arabidopsis affect root elongation during phosphate-limited growth but do not affect root hair patterning. DOI: 10.1104/pp.105.070995 ; PMID: 16384909
- Genome-wide analysis of the Arabidopsis leaf transcriptome reveals interaction of phosphate and sugar metabolism. DOI: 10.1104/pp.106.090167 ; PMID: 17085508
- Arabidopsis PLDzeta2 regulates vesicle trafficking and is required for auxin response. DOI: 10.1105/tpc.106.041426 ; PMID: 17259265
- The Arabidopsis E3 SUMO ligase SIZ1 regulates plant growth and drought responses. DOI: 10.1105/tpc.106.049981 ; PMID: 17905899
- Vacuolar Ca2+/H+ transport activity is required for systemic phosphate homeostasis involving shoot-to-root signaling in Arabidopsis. DOI: 10.1104/pp.111.175257 ; PMID: 21546457
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Differentiating phosphate-dependent and phosphate-independent systemic phosphate-starvation response networks in Arabidopsis thaliana through the application of phosphite. DOI: 10.1093/jxb/erv025 ; PMID: 25697796
- Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. DOI: 10.1002/pmic.200300607 ; PMID: 14760709
- Arabidopsis PLDzeta2 regulates vesicle trafficking and is required for auxin response. DOI: 10.1105/tpc.106.041426 ; PMID: 17259265
Gene Resources
Homologs
- Brassica napus GSBRNA2T00154795001
- Cucumis sativus CsPLDα
- Glycine max GmPLDγ
- Oryza sativa OsPLDalpha4, OsPLDalpha1, OsPLDalpha5, OsPLDbeta1
Sequences
cDNA Sequence
- >AT3G05630.1
ATTCTAAATAAAATCTAAAATCAATAGACACCTATATAACGTCGATTTATTGATCAGTGGAATCTCGAGTATTTCGGACATGCAATCGTGAACGGCGAGTTTCGACGACGGTTTGGGGAGTTAATCGATGTCGACGGATAAATTACTACTTCCTAACGGCGTTAAGTCAGACGGAGTCATCAGAATGACCAGAGCTGATGCTGCGGCGGCGGCAGCTTCTTCTTCTCTCGGCGGTGGAAGTCAAATATTCGACGAGCTTCCCAAGGCTGCGATCGTCTCGGTCTCGAGACCTGACACCACCGATTTTAGTCCCTTGCTTCTTTCTTACACCTTGGAGCTTCAGTATAAACAGTTCAAGTGGACATTACAAAAGAAGGCTTCTCAAGTTCTGTACTTACATTTTGCGTTGAAGAAACGTTTGATCATTGAAGAACTTCACGACAAGCAAGAACAGGTTAGAGAGTGGCTACACAGCTTGGGGATTTTTGATATGCAAGGATCAGTTGTGCAAGATGATGAAGAACCTGACGATGGTGCTCTTCCTCTGCACTATACTGAAGATAGTATCAAGAACAGGAATGTTCCTTCCCGTGCAGCGCTTCCAATCATTCGTCCAACGATAGGCCGGTCAGAGACAGTTGTAGATCGTGGGAGAACCGCAATGCAAGGCTACTTGAGTCTCTTTCTAGGGAACTTGGACATTGTAAACTCCAAAGAGGTCTGCAAGTTCCTAGAAGTTTCTAGACTCTCATTTGCTAGAGAGTACGGTTCCAAGATGAAAGAAGGGTATGTCACAGTGAAGCACTTGAGGGACGTCCCAGGTTCTGATGGTGTCCGATGCTGTCTTCCTACACACTGTCTCGGTTTCTTCGGAACTAGCTGGACAAAGGTTTGGGCGGTTCTGAAACCAGGATTTTTGGCGTTACTAGAAGATCCATTCAGCGGAAAGCTTCTAGATATAATGGTGTTCGACACATTGGGGTTGCAAGGTACTAAAGAGTCTTCTGAACAACCGCGTTTGGCTGAACAGGTGAAGGAACACAACCCATTGCGTTTTGGCTTTAAAGTTACTAGTGGGGACCGAACCGTGAGGCTGAGAACAACGAGCAGCAGGAAAGTTAAAGAGTGGGTTAAGGCCGTGGACGAAGCTGGTTGTTACAGTCCACATCGGTTTGGTTCGTTTGCACCACCTAGAGGCTTGACATCGGACGGAAGCCAGGCACAGTGGTTCGTAGACGGTCACACTGCGTTTGAAGCTATCGCGTTTGCAATCCAAAACGCAACATCAGAGATATTTATGACTGGTTGGTGGTTATGTCCGGAGCTATATCTCAAACGCCCCTTTGAAGATCATCCATCATTGCGGCTCGATGCATTGCTGGAGACAAAAGCAAAACAGGGCGTTAAGATATATATTCTTCTGTATAAGGAAGTCCAAATCGCGCTGAAAATCAACAGCTTGTACAGCAAGAAACGGCTTCAAAACATTCACAAGAACGTCAAAGTTCTTCGTTATCCAGACCATCTCTCCTCCGGCATTTACCTCTGGTCGCACCACGAGAAAATAGTGATTGTAGATTACCAAGTTTGTTTCATTGGAGGGTTAGATCTCTGTTTTGGGCGGTACGATACAGCGGAGCACAAGATTGGAGATTGCCCTCCTTATATATGGCCTGGAAAAGATTACTACAATCCTAGAGAATCTGAACCAAATTCGTGGGAAGAAACGATGAAAGATGAGTTAGACAGGAGAAAGTACCCGCGAATGCCGTGGCACGATGTCCACTGCGCTCTATGGGGACCGCCTTGTCGGGATGTGGCTCGACATTTTGTCCAGCGGTGGAACCACTCTAAGAGAAACAAGGCACCTAATGAACAGACGATTCCATTGTTGATGCCTCACCACCACATGGTTCTTCCTCACTACTTGGGAACTAGAGAGATCGATATAATCGCAGCGGCTAAACCAGAGGAAGACCCTGACAAACCTGTCGTTCTTGCCAGACATGACTCTTTCTCTTCTGCCTCACCGCCCCAAGAAATCCCTTTGCTTCTCCCACAAGAAACCGATGCAGATTTCGCCGGCAGAGGAGATCTGAAGTTAGACAGCGGTGCAAGACAAGATCCTGGGGAAACTTCAGAGGAAAGCGATCTGGACGAGGCTGTGAACGACTGGTGGTGGCAGATTGGGAAGCAGAGTGATTGCCGGTGTCAAATAATCAGAAGTGTTAGCCAATGGTCTGCTGGGACGAGCCAGCCTGAAGATAGCATTCATAGAGCTTATTGTTCGCTTATCCAGAACGCTGAACATTTTATCTACATAGAGAACCAATTCTTCATCTCCGGGCTAGAAAAAGAGGACACGATCCTAAACCGCGTTCTAGAAGCGTTATACAGACGCATTCTGAAGGCTCATGAAGAGAACAAGTGCTTCCGCGTTGTGATCGTTATTCCGCTACTCCCTGGATTTCAGGGAGGTATTGATGACTTCGGAGCAGCCACGGTTCGAGCACTGATGCATTGGCAATACCGTACGATCTCTAGAGAAGGAACTTCGATTCTTGACAACCTTAACGCTTTGCTCGGTCCCAAGACGCAAGATTACATCTCTTTCTATGGTTTGAGATCGTACGGACGGCTGTTTGAGGACGGTCCAATTGCCACTAGCCAGATTTACGTGCATAGCAAGTTAATGATTGTTGATGACCGGATCGCAGTGATCGGATCTTCTAATATAAACGATAGGAGCTTACTAGGTTCACGAGACTCTGAGATCGGTGTTGTGATTGAAGACAAAGAATTCGTGGAATCTTCGATGAACGGAATGAAGTGGATGGCCGGGAAGTTCTCTTACAGTCTTAGATGTTCCTTGTGGTCAGAGCATCTCGGCCTTCACGCCGGAGAGATTCAGAAGATCGAAGATCCAATCAAAGATGCAACATACAAAGACTTATGGATGGCAACAGCTAAGAAAAACACGGACATCTACAACCAAGTCTTCTCGTGCATCCCGAATGAACATATACGCTCAAGAGCTGCATTGAGACACAATATGGCTCTTTGTAAAGACAAGTTGGGTCACACTACGATCGACCTTGGCATTGCACCGGAGAGGCTAGAATCATGCGGCAGCGACTCGTGGGAGATTCTGAAGGAGACAAGAGGGAACCTTGTGTGCTTCCCATTACAGTTCATGTGTGATCAAGAAGATCTCAGACCAGGTTTCAACGAATCTGAGTTCTACACTGCTCCTCAAGTCTTCCACTAACCACTATTTATTGTACGCCCAGTTCTCTTTAATCAGTTAATAGAGTACCTAAGCTCACACGTTACTTATGTATAGAGATGTTAGTTATATAGAAAGAAGAAATTCATTTGATTGCTTCCTAGGTTCGCAGAGGTATGTGTGTGTATAGTATACACTTCTTGTAAATCATAATGTTTATGTGCCTCAAGCTGTACAATACATCTTCAATTGCGGATATGTTCTTACAACTTTGGAGTTGATATATGTTTGATT
CDS Sequence
- >AT3G05630.1
ATGTCGACGGATAAATTACTACTTCCTAACGGCGTTAAGTCAGACGGAGTCATCAGAATGACCAGAGCTGATGCTGCGGCGGCGGCAGCTTCTTCTTCTCTCGGCGGTGGAAGTCAAATATTCGACGAGCTTCCCAAGGCTGCGATCGTCTCGGTCTCGAGACCTGACACCACCGATTTTAGTCCCTTGCTTCTTTCTTACACCTTGGAGCTTCAGTATAAACAGTTCAAGTGGACATTACAAAAGAAGGCTTCTCAAGTTCTGTACTTACATTTTGCGTTGAAGAAACGTTTGATCATTGAAGAACTTCACGACAAGCAAGAACAGGTTAGAGAGTGGCTACACAGCTTGGGGATTTTTGATATGCAAGGATCAGTTGTGCAAGATGATGAAGAACCTGACGATGGTGCTCTTCCTCTGCACTATACTGAAGATAGTATCAAGAACAGGAATGTTCCTTCCCGTGCAGCGCTTCCAATCATTCGTCCAACGATAGGCCGGTCAGAGACAGTTGTAGATCGTGGGAGAACCGCAATGCAAGGCTACTTGAGTCTCTTTCTAGGGAACTTGGACATTGTAAACTCCAAAGAGGTCTGCAAGTTCCTAGAAGTTTCTAGACTCTCATTTGCTAGAGAGTACGGTTCCAAGATGAAAGAAGGGTATGTCACAGTGAAGCACTTGAGGGACGTCCCAGGTTCTGATGGTGTCCGATGCTGTCTTCCTACACACTGTCTCGGTTTCTTCGGAACTAGCTGGACAAAGGTTTGGGCGGTTCTGAAACCAGGATTTTTGGCGTTACTAGAAGATCCATTCAGCGGAAAGCTTCTAGATATAATGGTGTTCGACACATTGGGGTTGCAAGGTACTAAAGAGTCTTCTGAACAACCGCGTTTGGCTGAACAGGTGAAGGAACACAACCCATTGCGTTTTGGCTTTAAAGTTACTAGTGGGGACCGAACCGTGAGGCTGAGAACAACGAGCAGCAGGAAAGTTAAAGAGTGGGTTAAGGCCGTGGACGAAGCTGGTTGTTACAGTCCACATCGGTTTGGTTCGTTTGCACCACCTAGAGGCTTGACATCGGACGGAAGCCAGGCACAGTGGTTCGTAGACGGTCACACTGCGTTTGAAGCTATCGCGTTTGCAATCCAAAACGCAACATCAGAGATATTTATGACTGGTTGGTGGTTATGTCCGGAGCTATATCTCAAACGCCCCTTTGAAGATCATCCATCATTGCGGCTCGATGCATTGCTGGAGACAAAAGCAAAACAGGGCGTTAAGATATATATTCTTCTGTATAAGGAAGTCCAAATCGCGCTGAAAATCAACAGCTTGTACAGCAAGAAACGGCTTCAAAACATTCACAAGAACGTCAAAGTTCTTCGTTATCCAGACCATCTCTCCTCCGGCATTTACCTCTGGTCGCACCACGAGAAAATAGTGATTGTAGATTACCAAGTTTGTTTCATTGGAGGGTTAGATCTCTGTTTTGGGCGGTACGATACAGCGGAGCACAAGATTGGAGATTGCCCTCCTTATATATGGCCTGGAAAAGATTACTACAATCCTAGAGAATCTGAACCAAATTCGTGGGAAGAAACGATGAAAGATGAGTTAGACAGGAGAAAGTACCCGCGAATGCCGTGGCACGATGTCCACTGCGCTCTATGGGGACCGCCTTGTCGGGATGTGGCTCGACATTTTGTCCAGCGGTGGAACCACTCTAAGAGAAACAAGGCACCTAATGAACAGACGATTCCATTGTTGATGCCTCACCACCACATGGTTCTTCCTCACTACTTGGGAACTAGAGAGATCGATATAATCGCAGCGGCTAAACCAGAGGAAGACCCTGACAAACCTGTCGTTCTTGCCAGACATGACTCTTTCTCTTCTGCCTCACCGCCCCAAGAAATCCCTTTGCTTCTCCCACAAGAAACCGATGCAGATTTCGCCGGCAGAGGAGATCTGAAGTTAGACAGCGGTGCAAGACAAGATCCTGGGGAAACTTCAGAGGAAAGCGATCTGGACGAGGCTGTGAACGACTGGTGGTGGCAGATTGGGAAGCAGAGTGATTGCCGGTGTCAAATAATCAGAAGTGTTAGCCAATGGTCTGCTGGGACGAGCCAGCCTGAAGATAGCATTCATAGAGCTTATTGTTCGCTTATCCAGAACGCTGAACATTTTATCTACATAGAGAACCAATTCTTCATCTCCGGGCTAGAAAAAGAGGACACGATCCTAAACCGCGTTCTAGAAGCGTTATACAGACGCATTCTGAAGGCTCATGAAGAGAACAAGTGCTTCCGCGTTGTGATCGTTATTCCGCTACTCCCTGGATTTCAGGGAGGTATTGATGACTTCGGAGCAGCCACGGTTCGAGCACTGATGCATTGGCAATACCGTACGATCTCTAGAGAAGGAACTTCGATTCTTGACAACCTTAACGCTTTGCTCGGTCCCAAGACGCAAGATTACATCTCTTTCTATGGTTTGAGATCGTACGGACGGCTGTTTGAGGACGGTCCAATTGCCACTAGCCAGATTTACGTGCATAGCAAGTTAATGATTGTTGATGACCGGATCGCAGTGATCGGATCTTCTAATATAAACGATAGGAGCTTACTAGGTTCACGAGACTCTGAGATCGGTGTTGTGATTGAAGACAAAGAATTCGTGGAATCTTCGATGAACGGAATGAAGTGGATGGCCGGGAAGTTCTCTTACAGTCTTAGATGTTCCTTGTGGTCAGAGCATCTCGGCCTTCACGCCGGAGAGATTCAGAAGATCGAAGATCCAATCAAAGATGCAACATACAAAGACTTATGGATGGCAACAGCTAAGAAAAACACGGACATCTACAACCAAGTCTTCTCGTGCATCCCGAATGAACATATACGCTCAAGAGCTGCATTGAGACACAATATGGCTCTTTGTAAAGACAAGTTGGGTCACACTACGATCGACCTTGGCATTGCACCGGAGAGGCTAGAATCATGCGGCAGCGACTCGTGGGAGATTCTGAAGGAGACAAGAGGGAACCTTGTGTGCTTCCCATTACAGTTCATGTGTGATCAAGAAGATCTCAGACCAGGTTTCAACGAATCTGAGTTCTACACTGCTCCTCAAGTCTTCCACTAA
Protein Sequence
- >AT3G05630.1
MSTDKLLLPNGVKSDGVIRMTRADAAAAAASSSLGGGSQIFDELPKAAIVSVSRPDTTDFSPLLLSYTLELQYKQFKWTLQKKASQVLYLHFALKKRLIIEELHDKQEQVREWLHSLGIFDMQGSVVQDDEEPDDGALPLHYTEDSIKNRNVPSRAALPIIRPTIGRSETVVDRGRTAMQGYLSLFLGNLDIVNSKEVCKFLEVSRLSFAREYGSKMKEGYVTVKHLRDVPGSDGVRCCLPTHCLGFFGTSWTKVWAVLKPGFLALLEDPFSGKLLDIMVFDTLGLQGTKESSEQPRLAEQVKEHNPLRFGFKVTSGDRTVRLRTTSSRKVKEWVKAVDEAGCYSPHRFGSFAPPRGLTSDGSQAQWFVDGHTAFEAIAFAIQNATSEIFMTGWWLCPELYLKRPFEDHPSLRLDALLETKAKQGVKIYILLYKEVQIALKINSLYSKKRLQNIHKNVKVLRYPDHLSSGIYLWSHHEKIVIVDYQVCFIGGLDLCFGRYDTAEHKIGDCPPYIWPGKDYYNPRESEPNSWEETMKDELDRRKYPRMPWHDVHCALWGPPCRDVARHFVQRWNHSKRNKAPNEQTIPLLMPHHHMVLPHYLGTREIDIIAAAKPEEDPDKPVVLARHDSFSSASPPQEIPLLLPQETDADFAGRGDLKLDSGARQDPGETSEESDLDEAVNDWWWQIGKQSDCRCQIIRSVSQWSAGTSQPEDSIHRAYCSLIQNAEHFIYIENQFFISGLEKEDTILNRVLEALYRRILKAHEENKCFRVVIVIPLLPGFQGGIDDFGAATVRALMHWQYRTISREGTSILDNLNALLGPKTQDYISFYGLRSYGRLFEDGPIATSQIYVHSKLMIVDDRIAVIGSSNINDRSLLGSRDSEIGVVIEDKEFVESSMNGMKWMAGKFSYSLRCSLWSEHLGLHAGEIQKIEDPIKDATYKDLWMATAKKNTDIYNQVFSCIPNEHIRSRAALRHNMALCKDKLGHTTIDLGIAPERLESCGSDSWEILKETRGNLVCFPLQFMCDQEDLRPGFNESEFYTAPQVFH