Information report for AT3G05545
Gene Details
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Functional Descriptions
- gasp1 — weak PILS6-GFP fluorescence signal after 24&
Functional Keywords
Literature and News
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
- Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. DOI: 10.1104/pp.105.067983 ; PMID: 16339806
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- PILS proteins provide a homeostatic feedback on auxin signaling output. DOI: 10.1242/dev.200929 ; PMID: 35819066
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: Q84WW4
- EMBL: BT001921, CP002686, DQ059111
- AlphaFoldDB: Q84WW4
- EnsemblPlants: AT3G05545.1
- Gramene: AT3G05545.1
- KEGG: ath:AT3G05545
- Orthologous matrix: IWERDPY
- ExpressionAtlas: AT3G05545
- InterPro: IPR001841, IPR013083, IPR044274
- PANTHER: PTHR46798, PTHR46798:SF16
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- OrthoDB: Q84WW4
- SWISS-MODEL: Q84WW4
Homologs
- Brachypodium distachyon BRADI_3g41680v3
- Brassica napus BnaC04G0002800ZS, BnaA05G0002700ZS
- Brassica oleracea Bo4g002370
- Brassica rapa Bra004436
- Juglans regia Jr08_12330
- Oryza sativa IPI1, OsRFPH2-10
- Prunus avium Pav_sc0000174.1_g210.1.mk
- Saccharum spontaneum Sspon.07G0012650-1A
- Setaria viridis SEVIR_2G281100v2
- Solanum tuberosum PGSC0003DMG400029067
Sequences
cDNA Sequence
- >AT3G05545.1
GAAAAAGCTTAGGGGGAAGCAGCTGATGGGTAAAGTAGACAAATCCGTCAGAATAAATCTGAGCCGTCCATTCTAGTCTTTGGACAGCGGTCATTGCTTCTACCCCGTAACCCAATCTTTCTCACACAAAACATAACGCTACAGAAAAAAAAAAAAACTCTAAAAAATCAAAGAGCGATTTTTTTTCTTCTTCCTGGGTCTCTCTCTGGTGGTGACGATCGAAGAGAGTTCACGGATTCGTACAAGGATTAAATTAATTATTCTGGTAAATTAATCGAAGCGTAAGGAATTGGGGAGAGTGATTTTTCTGGGTTCGAATTTGGTGGTTGATTCAAAAAAAAAAAAGGGTTTTGAGATTTGGGTTATTTTGATTTCGAATTTTGGTTATGGGTTTAGGCAATAAGGGTAACAAATTCAATTTCGGCGATAATGATCTCGCCGACGAAGCTAGTGGTGCCGATGGCGACGAAGGTGATGGTTTTGGTTCGGTTGCGTGTTCGATTTGTCTCGAGACGGTTGTTAAAAACGGCGATCGAGCATGGGCTAATCTTCAATGTGACCATCAGTTCCATCTAGATTGTATTGGTTCGGCTTTCAATGCAAAGGGAGTGATGCAATGCCCCAACTGTCGGAAAGTAGAAAAAGGCCAGTGGCTTTATGCAAACGGTTGTCGTTCATATCCCGAATTCAATGTCGAGGATTGGGTTCACGAAGAAGATATTTATGATATTGGAGCATACTCTGAAATGTCTTTTGGAGTTCACTGGTGCCCATTTGGAAGCTCAGCCCGTCTTCCTTCTTTCGAGGATGGAGAATTTTCACCGAGTTCATATCACGATCTTTTGGGACAGCAAGGTTACTATACTGAACCAGCAGCGCCAACCGCAGGTCATCCATGTCCATATGTAACCTATTTTGGCCCGGTTCACTCGCCTTCCTCAAGCAGTGGTGGTGCTGCAGGCGTTTCAGACAGTTCAAGTTTCAGTAGTCACTGGAACACTGGCTCTTCGGTTTCTGGTGAAGTCCCAACTCCTTATGGTTTCCCTGTGGATCCGCACTATCACGGCTGGGATTATCATCCGCCTCCACCCCCACCGCCACAGCATTTCTCTGCTTCTGGCGCTCATGTGGGCAGTCCAACTCAGCCCACGCCTCCACCAGCCGCTGCGAGGACTTCTCGAGCCAACGGCTCAGATATGATCAGACCCAGACCGCCACATTTCACGCGTCCATTTCATGGTCACAGTTCCAGTGGTAGAGCGGGTAGCTCGGTGGCATCTGTTCCGAGGACACCACCATTTCCAGGAAGCAACGCTCGGACCCGAGACAGAATGCAGGCTCTTCAAGCCTATTACCAACAGTCTTCTGCACAGTCACACCAGCCGGATTCGCCTATAGTCTCTCGAGGGCCTGTATTCCCATCTGGCCGGAGGCCCGCTAGAGGAATAGCTTCAGGGATGGGATCAACGTCATCTTCTTCAGATCAGGCAGGTGGGAGTGGTTTTATCCGGTTTAACATATGGGAGAGAGATCCTTATATGCAATCACAACAAGCCTACTCGGTTAATCAGATGGACAGAGAACCAAACATTTGGACATCTTCATTTAATGAAGGATCAGGAAGCTTCCATCAGAGGCACGGTGGCGGAGGAGGATCATCTTAAGAACTGAGTCAGTACCCGTTCGAGATTCTCACCGGTCGGGCAATTCTCATGATGGACAAAAAACCAAAAAAAGAAAAAAAAAACATTGGGAATTTGATATTTGAGAAAACCTGAAAAACTGCATGCTCAAGTTATGTGATGAATTGATAATCTAAAAACACAAAATGGTATGTAATGGTTTGGAGAGAGACTGCCTCCCCCAGTCGGTGGTGTGACCCCCGTGCGGTTCGAGGTCTGGGTATGAATCGGGGGAGCGAAAGAGGTCTTTGGGTATTTGTTTTTTAATGTGGCGACATTGGGTATCCAAGTTATTACCCTAATGAAACTTTCTTTCTTCTATCTGGTTATGTTAAATTTTAACTGTCGAGTTTTTCTTCATATTACTATCCCAAATTTTGATGGTCTTTCTTTTGTTTTGTTTTTTCCCTACAACATAAAAATTGACGTCAAATGACCAAGACTATAGTCTATACG
CDS Sequence
- >AT3G05545.1
ATGGGTTTAGGCAATAAGGGTAACAAATTCAATTTCGGCGATAATGATCTCGCCGACGAAGCTAGTGGTGCCGATGGCGACGAAGGTGATGGTTTTGGTTCGGTTGCGTGTTCGATTTGTCTCGAGACGGTTGTTAAAAACGGCGATCGAGCATGGGCTAATCTTCAATGTGACCATCAGTTCCATCTAGATTGTATTGGTTCGGCTTTCAATGCAAAGGGAGTGATGCAATGCCCCAACTGTCGGAAAGTAGAAAAAGGCCAGTGGCTTTATGCAAACGGTTGTCGTTCATATCCCGAATTCAATGTCGAGGATTGGGTTCACGAAGAAGATATTTATGATATTGGAGCATACTCTGAAATGTCTTTTGGAGTTCACTGGTGCCCATTTGGAAGCTCAGCCCGTCTTCCTTCTTTCGAGGATGGAGAATTTTCACCGAGTTCATATCACGATCTTTTGGGACAGCAAGGTTACTATACTGAACCAGCAGCGCCAACCGCAGGTCATCCATGTCCATATGTAACCTATTTTGGCCCGGTTCACTCGCCTTCCTCAAGCAGTGGTGGTGCTGCAGGCGTTTCAGACAGTTCAAGTTTCAGTAGTCACTGGAACACTGGCTCTTCGGTTTCTGGTGAAGTCCCAACTCCTTATGGTTTCCCTGTGGATCCGCACTATCACGGCTGGGATTATCATCCGCCTCCACCCCCACCGCCACAGCATTTCTCTGCTTCTGGCGCTCATGTGGGCAGTCCAACTCAGCCCACGCCTCCACCAGCCGCTGCGAGGACTTCTCGAGCCAACGGCTCAGATATGATCAGACCCAGACCGCCACATTTCACGCGTCCATTTCATGGTCACAGTTCCAGTGGTAGAGCGGGTAGCTCGGTGGCATCTGTTCCGAGGACACCACCATTTCCAGGAAGCAACGCTCGGACCCGAGACAGAATGCAGGCTCTTCAAGCCTATTACCAACAGTCTTCTGCACAGTCACACCAGCCGGATTCGCCTATAGTCTCTCGAGGGCCTGTATTCCCATCTGGCCGGAGGCCCGCTAGAGGAATAGCTTCAGGGATGGGATCAACGTCATCTTCTTCAGATCAGGCAGGTGGGAGTGGTTTTATCCGGTTTAACATATGGGAGAGAGATCCTTATATGCAATCACAACAAGCCTACTCGGTTAATCAGATGGACAGAGAACCAAACATTTGGACATCTTCATTTAATGAAGGATCAGGAAGCTTCCATCAGAGGCACGGTGGCGGAGGAGGATCATCTTAA
Protein Sequence
- >AT3G05545.1
MGLGNKGNKFNFGDNDLADEASGADGDEGDGFGSVACSICLETVVKNGDRAWANLQCDHQFHLDCIGSAFNAKGVMQCPNCRKVEKGQWLYANGCRSYPEFNVEDWVHEEDIYDIGAYSEMSFGVHWCPFGSSARLPSFEDGEFSPSSYHDLLGQQGYYTEPAAPTAGHPCPYVTYFGPVHSPSSSSGGAAGVSDSSSFSSHWNTGSSVSGEVPTPYGFPVDPHYHGWDYHPPPPPPPQHFSASGAHVGSPTQPTPPPAAARTSRANGSDMIRPRPPHFTRPFHGHSSSGRAGSSVASVPRTPPFPGSNARTRDRMQALQAYYQQSSAQSHQPDSPIVSRGPVFPSGRRPARGIASGMGSTSSSSDQAGGSGFIRFNIWERDPYMQSQQAYSVNQMDREPNIWTSSFNEGSGSFHQRHGGGGGSS