Gene Details:
- Gene ID: AT3G05220
- Gene Symbol: AtHMP23
- Gene Name: HEAVY METAL ASSOCIATED PROTEIN 23
- Description: Heavy metal transport/detoxification superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Germplasm Phenotype:
- CS65873 — No visible phenotype.
Function-related keywords:
Literature:
- AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targets. DOI: 10.1016/j.molcel.2004.06.006 ; PMID: 15260969
- Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications. DOI: 10.1101/gr.2544504 ; PMID: 15489341
- The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. DOI: 10.1104/pp.105.068171 ; PMID: 16258011
- Exploiting the wild crucifer Thlaspi arvense to identify conserved and novel genes expressed during a plant's response to cold stress. DOI: 10.1007/s11103-006-9080-4 ; PMID: 16972165
- Transcriptome analysis of auxin-regulated genes of Arabidopsis thaliana. DOI: 10.1016/j.gene.2008.05.017 ; PMID: 18577427
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Heavy metal-associated isoprenylated plant protein (HIPP): characterization of a family of proteins exclusive to plants. DOI: 10.1111/febs.12159 ; PMID: 23368984
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
Sequences:
cDNA Sequence
- >AT3G05220.1
CTCAACTCTGTATCAGAAAAAGAAAAAACATAAAAAAAGGTACGAAAATTTAAAAAGAAGAAAAAGAAAAGATTTGATATTAAAAGTGTCAATTAAAAAAAGATATTTTGCAAAATCAAAGTTGGGAGATTTCCTTGCAAGCTGTGCCACCGCCCTCTCTCTCTCTCTCTCTCTTAGTTTTTTTTACAGACATAGAAATAAGAAACCCTGAAACAGAGATAAAACAAAACACAAGTTTTGAGTGTGTTTTTTCAAGTCTCTCTCTTCTCTCTCTGTCCTTGTTAAACACAGCAACCGCCTTTATTACACAAAACTCTCTTATAATAATCTCTCTCACCATTTCTTCTCTTCTCTTCAGAAGAAAGAAAGAAACTCATAAAGGAGAAGAAATAAGAGTTTCTCTGTCTTAAACTCATTCATTCTTTCTCTCTCTATAACCAGAGTTCTGTCTGTGAAAACACACAAATCTAAGAGAAGTTATGAATAAACAAGATGTTATGAAACTTCAGACTTGTGTTCTGAAAGTGAACGTACACTGTGAAGGGTGTAAGCATAAAGTGAAGAAACAATTGCAGAAAATCGAAGGTGTTTACTCTGTAAAAGCAGATGTAGAACAGGGGAGAGTTACTGTTACAGGGAACATTGACCCAGCTCTTCTGGTTAAGAAACTTAGCAAATCAGGCAAACATGCCGAGATCTTAGGCGGTGGTGGAGGAGGAGGCGGCGGAGGTGGAAAGGGGTTTCCTAATCTGAATGGGCAATTTGCAAATCTCAACATGGGTGGAAACAATAAGCCTAAAGGTGGAAAAGAGAGTAACCAAGTCAAGGGTAAAGCTGGTGGTGGCGGTGGAGGAGGTCAGAATCATGGACATGGTCAGCCAATGCAATTGAATCCTCAACAGATTCAACAGATGATGATGATGAAGGCTGCTCACGGTGGTGGTGGTGGTGGTCAGATGAAGATGCCGCCTATGGCAGCTAAGGATCAGAAGAAGTCAGTTAAGTTTGCTGATGATGAAGACGATGAGTTTAGTGAAGATGATTATGATGATGAGGATTTCAGTGAAGATGATTATGATGATGATGAGTTCGATGATGATGAAGATGATGATGATGAGATGGGTCATGGTCATGGACATGGAGGAGGTGGGGGTAATCACATGCCTCCTAATAAGATGATGATGCCTAACAAGATGATGCCTCAGATGGGTGGTCATCATGGTAATGGTGGTGGACCTAAGGGTCCCAATGAGATAATGATGATGATGAATGGGTTCAAAGGCGGAGGCGGTGGAGGAAAGAAAGGCGGTGGTGGCGGGTTTGAGATTCCGGTGCAGATGAAGGGAATGGGTGAGGGTAAAAATGGAAAGGATGGTAAAAAGGGTAAAGGAGGAGAGAAGGGTAAGAAAGAAGGGAAAGAGAATAAAGGTGGGGGCAAAACCGGAAAAACAGATGCCAAAAGTGGTGGTGGTGGCCTTCTAGGGTTTTTCAAAAAGGGTAAAAGTGGGAACGGAGATGAGAAGAAGAGCGCTGGGAAGAAAGATGGCCATGGGGGTAATAAGGTCAAATCTCATGGTGGGGGAGGAGGAGTTCAGCATTATGATAGTGGGCCTAAAAAAGGTGGTGGTGGGACCAAAGGAGGAGGCCATGGGGGCCTTGACATTGATGAGCTCATGAAACACAGCAAAGGAGGAGGAGGAGGAGGTAACAAGGGCAATCATAATCATAGCGCCAAAGGGATTGGTGGTGGCCCAATGGGTCCAGGCGGTCCGATGGGTCCAGGCGGTCCGATGGGTCAAGGTGGTCCGATGGGTATGATGGGTCCAGGTGGTCCGATGAGTATGATGGGTCCAGGCGGTCCTATGGGTCCAATGGGTGGCCAAGGCGGCTCTTACCCAGCGGTTCAAGGCTTGCCAATGAGTGGAGGTGGAGGATATTATCCAGGGCCGCCTCAGGCAAGTCAGCAAATGAACCAACAACAATATATGCAAATGATGATGAACCAACAGCAGCAACAACAACAACAACAACAAGCTGTAGCTCATGGTGGCTATGGCGGTGGTCACGGTGGCGACATGTACCATCCGATGATGTACGCTCGGCCTTATCCTGCAGTTAATTATGCTCACCCTCCACCAATGCCGCCTCCTCACTCGGATTCTTATACTCATATGTTCAGCGATGAGAATCCAGGTAGTTGTAGTATTATGTGATCATCTTTTGTAATGTTATTTAGAATATGGACATGTATGCTTGTCTTAGTCTTATGTTTTTTTTTTTGGGGATGTCCTTATCTTTTTTACTTTGGAGGATTGGAAACAAAATGTGCTTTAATTTTGTTAGTGGAATGATGTTTATAATATCTCGATTTCGGAAAAAGAATGGTTATTGGTTATTAGGTTGCAGAAAAAGTAGGATGTATGTTATGTAGTGTTTATCTTAGTGTGAAAAGGATGTTGCAGCCGCCTATATAGTAGGTATAACAGCATTATCATTTATGATAATCAACTTGTATAGTGTGCCACTACTGTTGTGTGATCACACCATATTAAATTTGACCCATAAAGTACCAACCTGGAGACTCATGTGTTGATTATGATGTTTCGAAAGTAAAATAATCCAAAAAAGTGTGGAGAAAACTTTGAGAACTATCCATTGTGTTCGACCCAGTTATTTTCGAAAGGTCAAATTAGTGTATGATTCGAGAAATCACTACAGTTGTTTTCACTAGTAAGTTAGTAACCGTTGTGTCTCTTATCAAAACTTGAATTCATATTTTGGCCAATATAGTACAATATTGCAGACAATGTTTCC - >AT3G05220.2
CTCAACTCTGTATCAGAAAAAGAAAAAACATAAAAAAAGGTACGAAAATTTAAAAAGAAGAAAAAGAAAAGATTTGATATTAAAAGTGTCAATTAAAAAAAGATATTTTGCAAAATCAAAGTTGGGAGATTTCCTTGCAAGCTGTGCCACCGCCCTCTCTCTCTCTCTCTCTCTTAGTTTTTTTTACAGACATAGAAATAAGAAACCCTGAAACAGAGATAAAACAAAACACAAGTTTTGAGTGTGTTTTTTCAAGTCTCTCTCTTCTCTCTCTGTCCTTGTTAAACACAGCAACCGCCTTTATTACACAAAACTCTCTTATAATAATCTCTCTCACCATTTCTTCTCTTCTCTTCAGAAGAAAGAAAGAAACTCATAAAGGAGAAGAAATAAGAGTTTCTCTGTCTTAAACTCATTCATTCTTTCTCTCTCTATAACCAGAGTTCTGTCTGTGAAAACACACAAATCTAAGAGAAGTTATGAATAAACAAGATGTTATGAAACTTCAGACTTGTGTTCTGAAAGTGAACGTACACTGTGAAGGGTGTAAGCATAAAGTGAAGAAACAATTGCAGAAAATCGAAGGTGTTTACTCTGTAAAAGCAGATGTAGAACAGGGGAGAGTTACTGTTACAGGGAACATTGACCCAGCTCTTCTGGTTAAGAAACTTAGCAAATCAGGCAAACATGCCGAGATCTTAGGCGGTGGTGGAGGAGGAGGCGGCGGAGGTGGAAAGGGGTTTCCTAATCTGAATGGGCAATTTGCAAATCTCAACATGGGTGGAAACAATAAGCCTAAAGGTGGAAAAGAGAGTAACCAAGTCAAGGGTAAAGCTGGTGGTGGCGGTGGAGGAGGTCAGAATCATGGACATGGTCAGCCAATGCAATTGAATCCTCAACAGATTCAACAGATGATGATGATGAAGGCTGCTCACGGTGGTGGTGGTGGTGGTCAGATGAAGATGCCGCCTATGGCAGCTAAGGATCAGAAGAAGTCAGTTAAGTTTGCTGATGATGAAGACGATGAGTTTAGTGAAGATGATTATGATGATGAGGATTTCAGTGAAGATGATTATGATGATGATGAGTTCGATGATGATGAAGATGATGATGATGAGATGGGTCATGGTCATGGACATGGAGGAGGTGGGGGTAATCACATGCCTCCTAATAAGATGATGATGCCTAACAAGATGATGCCTCAGATGGGTGGTCATCATGGTAATGGTGGTGGACCTAAGGGTCCCAATGAGATAATGATGATGATGAATGGGTTCAAAGGCGGAGGCGGTGGAGGAAAGAAAGGCGGTGGTGGCGGGTTTGAGATTCCGGTGCAGATGAAGGGAATGGGTGAGGGTAAAAATGGAAAGGATGGTAAAAAGGGTAAAGGAGGAGAGAAGGGTAAGAAAGAAGGGAAAGAGAATAAAGGTGGGGGCAAAACCGGAAAAACAGATGCCAAAAGTGGTGGTGGTGGCCTTCTAGGGTTTTTCAAAAAGGGTAAAAGTGGGAACGGAGATGAGAAGAAGAGCGCTGGGAAGAAAGATGGCCATGGGGGTAATAAGGTCAAATCTCATGGTGGGGGAGGAGGAGTTCAGCATTATGATAGTGGGCCTAAAAAAGGTGGTGGTGGGACCAAAGGAGGAGGCCATGGGGGCCTTGACATTGATGAGCTCATGAAACACAGCAAAGGAGGAGGAGGAGGAGGTAACAAGGGCAATCATAATCATAGCGCCAAAGGGATTGGTGGTGGCCCAATGGGTCCAGGCGGTCCGATGGGTCCAGGCGGTCCGATGGGTCAAGGTGGTCCGATGGGTATGATGGGTCCAGGTGGTCCGATGAGTATGATGGGTCCAGGCGGTCCTATGGGTCCAATGGGTGGCCAAGGCGGCTCTTACCCAGCGGTTCAAGGCTTGCCAATGAGTGGAGGTGGAGGATATTATCCAGGGCCGCCTCAGGCAAGTCAGCAAATGAACCAACAACAATATATGCAAATGATGATGAACCAACAGCAGCAACAACAACAACAACAACAAGCTGTAGCTCATGGTGGCTATGGCGGTGGTCACGGTGGCGACATGTACCATCCGATGATGTACGCTCGGCCTTATCCTGCAGTTAATTATGCTCACCCTCCACCAATGCCGCCTCCTCACTCGGATTCTTATACTCATATGTTCAGCGATGAGAATCCAGGTAGTTGTAGTATTATGTGATCATCTTTTGTAATGTTATTTAGAATATGGACATGTATGCTTGTCTTAGTCTTATGTTTTTTTTTTTGGGGATGTCCTTATCTTTTTTACTTTGGAGGATTGGAAACAAAATGTGCTTTAATTTTGTTAGTGGAATGATGTTTATAATATCTCGATTTCGGAAAAAGAATGGTTATTGGTTATTAGGTTGCAGAAAAAGTAGGATGTATGTTATGTAGTGTTTATCTTAGTGTGAAAAGGATGTTGCAGCCGCCTATATAGTAGGTATAACAGCATTATCATTTATGATAATCAACTTGTATAGTGTGCCACTACTGTTGTGTGATCACACCATATTAAATTTGACCCATAAAGTACCAACCTGGAGACTCATGTGTTGATTATGATGTTTCGAAAGTAAAATAATCCAAAAAAGTGTGGAGAAAACTTTGAGAACTATCCATTGTGTTCGACCCAGTTATTTTCGAAAGGTCAAATTAGTGTATGATTCGAGAAATCACTACAGTTGTTTTCACTAGTAAGTTAGTAACCGTTGTGTCTCTTATCAAAACTTGAATTCATATTTTGGCCAATATAGTACAATATTGCAGACAATGTTTCC
CDS Sequence
- >AT3G05220.1
ATGAATAAACAAGATGTTATGAAACTTCAGACTTGTGTTCTGAAAGTGAACGTACACTGTGAAGGGTGTAAGCATAAAGTGAAGAAACAATTGCAGAAAATCGAAGGTGTTTACTCTGTAAAAGCAGATGTAGAACAGGGGAGAGTTACTGTTACAGGGAACATTGACCCAGCTCTTCTGGTTAAGAAACTTAGCAAATCAGGCAAACATGCCGAGATCTTAGGCGGTGGTGGAGGAGGAGGCGGCGGAGGTGGAAAGGGGTTTCCTAATCTGAATGGGCAATTTGCAAATCTCAACATGGGTGGAAACAATAAGCCTAAAGGTGGAAAAGAGAGTAACCAAGTCAAGGGTAAAGCTGGTGGTGGCGGTGGAGGAGGTCAGAATCATGGACATGGTCAGCCAATGCAATTGAATCCTCAACAGATTCAACAGATGATGATGATGAAGGCTGCTCACGGTGGTGGTGGTGGTGGTCAGATGAAGATGCCGCCTATGGCAGCTAAGGATCAGAAGAAGTCAGTTAAGTTTGCTGATGATGAAGACGATGAGTTTAGTGAAGATGATTATGATGATGAGGATTTCAGTGAAGATGATTATGATGATGATGAGTTCGATGATGATGAAGATGATGATGATGAGATGGGTCATGGTCATGGACATGGAGGAGGTGGGGGTAATCACATGCCTCCTAATAAGATGATGATGCCTAACAAGATGATGCCTCAGATGGGTGGTCATCATGGTAATGGTGGTGGACCTAAGGGTCCCAATGAGATAATGATGATGATGAATGGGTTCAAAGGCGGAGGCGGTGGAGGAAAGAAAGGCGGTGGTGGCGGGTTTGAGATTCCGGTGCAGATGAAGGGAATGGGTGAGGGTAAAAATGGAAAGGATGGTAAAAAGGGTAAAGGAGGAGAGAAGGGTAAGAAAGAAGGGAAAGAGAATAAAGGTGGGGGCAAAACCGGAAAAACAGATGCCAAAAGTGGTGGTGGTGGCCTTCTAGGGTTTTTCAAAAAGGGTAAAAGTGGGAACGGAGATGAGAAGAAGAGCGCTGGGAAGAAAGATGGCCATGGGGGTAATAAGGTCAAATCTCATGGTGGGGGAGGAGGAGTTCAGCATTATGATAGTGGGCCTAAAAAAGGTGGTGGTGGGACCAAAGGAGGAGGCCATGGGGGCCTTGACATTGATGAGCTCATGAAACACAGCAAAGGAGGAGGAGGAGGAGGTAACAAGGGCAATCATAATCATAGCGCCAAAGGGATTGGTGGTGGCCCAATGGGTCCAGGCGGTCCGATGGGTCCAGGCGGTCCGATGGGTCAAGGTGGTCCGATGGGTATGATGGGTCCAGGTGGTCCGATGAGTATGATGGGTCCAGGCGGTCCTATGGGTCCAATGGGTGGCCAAGGCGGCTCTTACCCAGCGGTTCAAGGCTTGCCAATGAGTGGAGGTGGAGGATATTATCCAGGGCCGCCTCAGGCAAGTCAGCAAATGAACCAACAACAATATATGCAAATGATGATGAACCAACAGCAGCAACAACAACAACAACAACAAGCTGTAGCTCATGGTGGCTATGGCGGTGGTCACGGTGGCGACATGTACCATCCGATGATGTACGCTCGGCCTTATCCTGCAGTTAATTATGCTCACCCTCCACCAATGCCGCCTCCTCACTCGGATTCTTATACTCATATGTTCAGCGATGAGAATCCAGGTAGTTGTAGTATTATGTGA - >AT3G05220.2
ATGAATAAACAAGATGTTATGAAACTTCAGACTTGTGTTCTGAAAGTGAACGTACACTGTGAAGGGTGTAAGCATAAAGTGAAGAAACAATTGCAGAAAATCGAAGGTGTTTACTCTGTAAAAGCAGATGTAGAACAGGGGAGAGTTACTGTTACAGGGAACATTGACCCAGCTCTTCTGGTTAAGAAACTTAGCAAATCAGGCAAACATGCCGAGATCTTAGGCGGTGGTGGAGGAGGAGGCGGCGGAGGTGGAAAGGGGTTTCCTAATCTGAATGGGCAATTTGCAAATCTCAACATGGGTGGAAACAATAAGCCTAAAGGTGGAAAAGAGAGTAACCAAGTCAAGGGTAAAGCTGGTGGTGGCGGTGGAGGAGGTCAGAATCATGGACATGGTCAGCCAATGCAATTGAATCCTCAACAGATTCAACAGATGATGATGATGAAGGCTGCTCACGGTGGTGGTGGTGGTGGTCAGATGAAGATGCCGCCTATGGCAGCTAAGGATCAGAAGAAGTCAGTTAAGTTTGCTGATGATGAAGACGATGAGTTTAGTGAAGATGATTATGATGATGAGGATTTCAGTGAAGATGATTATGATGATGATGAGTTCGATGATGATGAAGATGATGATGATGAGATGGGTCATGGTCATGGACATGGAGGAGGTGGGGGTAATCACATGCCTCCTAATAAGATGATGATGCCTAACAAGATGATGCCTCAGATGGGTGGTCATCATGGTAATGGTGGTGGACCTAAGGGTCCCAATGAGATAATGATGATGATGAATGGGTTCAAAGGCGGAGGCGGTGGAGGAAAGAAAGGCGGTGGTGGCGGGTTTGAGATTCCGGTGCAGATGAAGGGAATGGGTGAGGGTAAAAATGGAAAGGATGGTAAAAAGGGTAAAGGAGGAGAGAAGGGTAAGAAAGAAGGGAAAGAGAATAAAGGTGGGGGCAAAACCGGAAAAACAGATGCCAAAAGTGGTGGTGGTGGCCTTCTAGGGTTTTTCAAAAAGGGTAAAAGTGGGAACGGAGATGAGAAGAAGAGCGCTGGGAAGAAAGATGGCCATGGGGGTAATAAGGTCAAATCTCATGGTGGGGGAGGAGGAGTTCAGCATTATGATAGTGGGCCTAAAAAAGGTGGTGGTGGGACCAAAGGAGGAGGCCATGGGGGCCTTGACATTGATGAGCTCATGAAACACAGCAAAGGAGGAGGAGGAGGAGGTAACAAGGGCAATCATAATCATAGCGCCAAAGGGATTGGTGGTGGCCCAATGGGTCCAGGCGGTCCGATGGGTCCAGGCGGTCCGATGGGTCAAGGTGGTCCGATGGGTATGATGGGTCCAGGTGGTCCGATGAGTATGATGGGTCCAGGCGGTCCTATGGGTCCAATGGGTGGCCAAGGCGGCTCTTACCCAGCGGTTCAAGGCTTGCCAATGAGTGGAGGTGGAGGATATTATCCAGGGCCGCCTCAGGCAAGTCAGCAAATGAACCAACAACAATATATGCAAATGATGATGAACCAACAGCAGCAACAACAACAACAACAACAAGCTGTAGCTCATGGTGGCTATGGCGGTGGTCACGGTGGCGACATGTACCATCCGATGATGTACGCTCGGCCTTATCCTGCAGTTAATTATGCTCACCCTCCACCAATGCCGCCTCCTCACTCGGATTCTTATACTCATATGTTCAGCGATGAGAATCCAGGTAGTTGTAGTATTATGTGA
Protein Sequence
- >AT3G05220.1
MNKQDVMKLQTCVLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSGKHAEILGGGGGGGGGGGKGFPNLNGQFANLNMGGNNKPKGGKESNQVKGKAGGGGGGGQNHGHGQPMQLNPQQIQQMMMMKAAHGGGGGGQMKMPPMAAKDQKKSVKFADDEDDEFSEDDYDDEDFSEDDYDDDEFDDDEDDDDEMGHGHGHGGGGGNHMPPNKMMMPNKMMPQMGGHHGNGGGPKGPNEIMMMMNGFKGGGGGGKKGGGGGFEIPVQMKGMGEGKNGKDGKKGKGGEKGKKEGKENKGGGKTGKTDAKSGGGGLLGFFKKGKSGNGDEKKSAGKKDGHGGNKVKSHGGGGGVQHYDSGPKKGGGGTKGGGHGGLDIDELMKHSKGGGGGGNKGNHNHSAKGIGGGPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQGGSYPAVQGLPMSGGGGYYPGPPQASQQMNQQQYMQMMMNQQQQQQQQQQAVAHGGYGGGHGGDMYHPMMYARPYPAVNYAHPPPMPPPHSDSYTHMFSDENPGSCSIM - >AT3G05220.2
MNKQDVMKLQTCVLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSGKHAEILGGGGGGGGGGGKGFPNLNGQFANLNMGGNNKPKGGKESNQVKGKAGGGGGGGQNHGHGQPMQLNPQQIQQMMMMKAAHGGGGGGQMKMPPMAAKDQKKSVKFADDEDDEFSEDDYDDEDFSEDDYDDDEFDDDEDDDDEMGHGHGHGGGGGNHMPPNKMMMPNKMMPQMGGHHGNGGGPKGPNEIMMMMNGFKGGGGGGKKGGGGGFEIPVQMKGMGEGKNGKDGKKGKGGEKGKKEGKENKGGGKTGKTDAKSGGGGLLGFFKKGKSGNGDEKKSAGKKDGHGGNKVKSHGGGGGVQHYDSGPKKGGGGTKGGGHGGLDIDELMKHSKGGGGGGNKGNHNHSAKGIGGGPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQGGSYPAVQGLPMSGGGGYYPGPPQASQQMNQQQYMQMMMNQQQQQQQQQQAVAHGGYGGGHGGDMYHPMMYARPYPAVNYAHPPPMPPPHSDSYTHMFSDENPGSCSIM