Information report for AT3G05210
Gene Details
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Functional Descriptions
- GO:0000110 — part of — nucleotide-excision repair factor 1 complex
- GO:0006294 — acts upstream of or within — nucleotide-excision repair, preincision complex assembly
- GO:0003684 — enables — damaged DNA binding
- GO:0070522 — part of — ERCC4-ERCC1 complex
- GO:0000724 — acts upstream of or within — double-strand break repair via homologous recombination
- GO:0070914 — involved in — UV-damage excision repair
- GO:0005634 — located in — nucleus
- GO:0006312 — involved in — mitotic recombination
- GO:0010213 — acts upstream of or within — non-photoreactive DNA repair
Functional Keywords
Literature and News
- Repair of UV damage in plants by nucleotide excision repair: Arabidopsis UVH1 DNA repair gene is a homolog of Saccharomyces cerevisiae Rad1. DOI: 10.1046/j.1365-313x.2000.00707.x ; PMID: 10758502
- A DNA-damage-induced cell cycle checkpoint in Arabidopsis. DOI: 10.1093/genetics/164.1.323 ; PMID: 12750343
- Components of nucleotide excision repair and DNA damage tolerance in Arabidopsis thaliana. DOI: 10.1002/em.20094 ; PMID: 15645454
Gene Resources
- UniProt: A0A1I9LSV8
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LSV8
- EnsemblPlants: AT3G05210.2
- Gramene: AT3G05210.2
- Orthologous matrix: IMDVSME
- ExpressionAtlas: AT3G05210
- InterPro: IPR004579, IPR011335, IPR047260
- PANTHER: PTHR12749, PTHR12749:SF0
- SUPFAM: SSF52980
- Gene3D: 1.10.150.20, 3.40.50.10130
- OrthoDB: A0A1I9LSV8
- SWISS-MODEL: A0A1I9LSV8
- Conserved Domain Database: cd22325
Sequences
cDNA Sequence
- >AT3G05210.2
GTAACTCTAGATACTTTAGACAATTGGATGAAGACTGTCATAGTGTGCAAAAATACTGGTTTTAATTTGTTTTGTCGTCTCGTCTCGTCTATAATCTTAAGACACGTGTTACGTTGTATCAAATTTACATAATTAATGGGCTTTAGGCTTGAACAATTAAGGCCCACAAAAGCCTGTTAATCCCATGGGAAGTTGAGGACGAGAAACAGAGTCCGGGAAAAGAAAAAAGAGCTCTCGGAGATTCAATCACTCATGGCGAACGAAGACGACGACGGTGAGAAATCCAGAAGTCTGCACCAACAGATTGCTAGAAAACCCAAAACCCAGATCGTGATTGGTGTGCCATCGTACCAGGAAGTTTTGGAAAGCTCACAGACGAAGTCCACGCCTCCATCTCTCTTCAAGCCTTCCCAGAGTTTCTCTCAGGCTTTCGCTTTCGTCAAGTCGTCCGACGTCTACTCTCCTCCTCCTCCTTCCTCCGCAGCCGCCTCTTCTTCTCAGCCGTCGGGCGCTTCTCAGGTGCCCCACAGTTCAAGCCAAACGCATCAAACTGATGGAGCCTCATCTTCTTCTACTCCTGTAGCCACTGGCTCTGTACCATCAAACACAACTCAAAATCGTAACGCTATTCTCGTTAGCCATCGACAGAAAGGAAACCCGCTTCTTAAACATATCAGGAATGTGAAATGGGTTTTCTCAGATATCATTCCAGATTACGTGCTTGGTCAAAACTCTTGCGCTTTGTATTTAAGCTTGCGGTATCATCTCCTACATCCGGATTACCTCTATTTCCGCATTAGGGAACTACAAAAGAATTTCAAGCTAAGTGTTGTTCTTTGCCATGTCGACGTGGAAGATACGGTGAAACCGTTGCTTGAAGTCACAAAAACCGCTCTACTTCATGATTGCACTCTATTGTGTGCCTGGAGCATGACAGAATGTGCCCGTTATTTGGAAACGATAAAAGTCTATGAAAACAAACCTGCAGATCTCATCCAAGGCCAAATGGATACAGATTACCTTTCACGGCTAAACCATTCTCTTACAAGCATTCGACATGTAAACAAGAGCGATGTAGTTACACTTGGTTCTACATTCGGGGTTGAGCTAAAAAGACCTTATGTCCAGTTATTGTGAATTTATGATTTTTATGTTTCAAACTAAAATTGGAAACCTCAAAAATCATGGTTTATGCAGTCTCTTGCTCATATAATCGATGCATCCATGGAAGATTTAGCACGTTGTCCCGGGATTGGCGAACGTAAGGTGAAGCGGTTGTATGATACATTCCACGAGCCTTTCAAGCGTGCAACTTCGAGCTACCCGTCTGTTGTAGAACCACCAATCCCGGAAGCTCCAGTTGAGAAGGATGTGAACTCAGAGGAACCTGTTGAAGAAGACGAGGATTTTGTGGAGGACTCGAGAAAACGCAAGAAGAAGGAGCCCGAGCCCGAGAAAACTGTGAAGACCGCACTCTCTGCTGTTTTTGCTCGTTACTCTGATAGACTTAGCAAGAAAAAGGAGAAACAGAAGGAGAAAGATACAACAACGGCGTCAGATGCTGAAACCCACCAAAATTAACACGGTTTTGTTCCTTGGGTAAGGCCATGGTGACCACATTCCTAGGATTGTAACTTAATGATAATAAAAAAGCTTTACTGTGTCTAATTTGTGTGATCTCTACCATAGAATTGGTTGGTTATTGAAGCCTGCGTGTATAAATTTCAAAGGGTTGTTACTACTTTGTTATCTTTTTTCTTGGTCTGGGCCATGTGCAATAGTATTATAAACAAACAAAAC - >AT3G05210.1
GTAACTCTAGATACTTTAGACAATTGGATGAAGACTGTCATAGTGTGCAAAAATACTGGTTTTAATTTGTTTTGTCGTCTCGTCTCGTCTATAATCTTAAGACACGTGTTACGTTGTATCAAATTTACATAATTAATGGGCTTTAGGCTTGAACAATTAAGGCCCACAAAAGCCTGTTAATCCCATGGGAAGTTGAGGACGAGAAACAGAGTCCGGGAAAAGAAAAAAGAGCTCTCGGAGATTCAATCACTCATGGCGAACGAAGACGACGACGGTGAGAAATCCAGAAGTCTGCACCAACAGATTGCTAGAAAACCCAAAACCCAGATCGTGATTGGTGTGCCATCGTACCAGGAAGTTTTGGAAAGCTCACAGACGAAGTCCACGCCTCCATCTCTCTTCAAGCCTTCCCAGAGTTTCTCTCAGGCTTTCGCTTTCGTCAAGTCGTCCGACGTCTACTCTCCTCCTCCTCCTTCCTCCGCAGCCGCCTCTTCTTCTCAGCCGTCGGGCGCTTCTCAGGTGCCCCACAGTTCAAGCCAAACGCATCAAACTGATGGAGCCTCATCTTCTTCTACTCCTGTAGCCACTGGCTCTGTACCATCAAACACAACTCAAAATCGTAACGCTATTCTCGTTAGCCATCGACAGAAAGGAAACCCGCTTCTTAAACATATCAGGAATGTGAAATGGGTTTTCTCAGATATCATTCCAGATTACGTGCTTGGTCAAAACTCTTGCGCTTTGTATTTAAGCTTGCGGTATCATCTCCTACATCCGGATTACCTCTATTTCCGCATTAGGGAACTACAAAAGAATTTCAAGCTAAGTGTTGTTCTTTGCCATGTCGACGTGGAAGATACGGTGAAACCGTTGCTTGAAGTCACAAAAACCGCTCTACTTCATGATTGCACTCTATTGTGTGCCTGGAGCATGACAGAATGTGCCCGTTATTTGGAAACGATAAAAGTCTATGAAAACAAACCTGCAGATCTCATCCAAGGCCAAATGGATACAGATTACCTTTCACGGCTAAACCATTCTCTTACAAGCATTCGACATGTAAACAAGAGCGATGTAGTTACACTTGGTTCTACATTCGGGGTTGAGCTAAAAAGACCTTATGTCCAGTTATTGTGAATTTATGATTTTTATGTTTCAAACTAAAATTGGAAACCTCAAAAATCATGGTTTATGCAGTCTCTTGCTCATATAATCGATGCATCCATGGAAGATTTAGCACGTTGTCCCGGGATTGGCGAACGTAAGGTGAAGCGGTTGTATGATACATTCCACGAGCCTTTCAAGCGTGCAACTTCGAGCTACCCGTCTGTTGTAGAACCACCAATCCCGGAAGCTCCAGTTGAGAAGGATGTGAACTCAGAGGAACCTGTTGAAGAAGACGAGGATTTTGTGGAGGACTCGAGAAAACGCAAGAAGAAGGAGCCCGAGCCCGAGAAAACTGTGAAGACCGCACTCTCTGCTGTTTTTGCTCGTTACTCTGATAGACTTAGCAAGAAAAAGGAGAAACAGAAGGAGAAAGATACAACAACGGCGTCAGATGCTGAAACCCACCAAAATTAACACGGTTTTGTTCCTTGGGTAAGGCCATGGTGACCACATTCCTAGGATTGTAACTTAATGATAATAAAAAAGCTTTACTGTGTCTAATTTGTGTGATCTCTACCATAGAATTGGTTGGTTATTGAAGCCTGCGTGTATAAATTTCAAAGGGTTGTTACTACTTTGTTATCTTTTTTCTTGGTCTGGGCCATGTGCAATAGTATTATAAACAAACAAAAC
CDS Sequence
- >AT3G05210.2
ATGGCGAACGAAGACGACGACGGTGAGAAATCCAGAAGTCTGCACCAACAGATTGCTAGAAAACCCAAAACCCAGATCGTGATTGGTGTGCCATCGTACCAGGAAGTTTTGGAAAGCTCACAGACGAAGTCCACGCCTCCATCTCTCTTCAAGCCTTCCCAGAGTTTCTCTCAGGCTTTCGCTTTCGTCAAGTCGTCCGACGTCTACTCTCCTCCTCCTCCTTCCTCCGCAGCCGCCTCTTCTTCTCAGCCGTCGGGCGCTTCTCAGGTGCCCCACAGTTCAAGCCAAACGCATCAAACTGATGGAGCCTCATCTTCTTCTACTCCTGTAGCCACTGGCTCTGTACCATCAAACACAACTCAAAATCGTAACGCTATTCTCGTTAGCCATCGACAGAAAGGAAACCCGCTTCTTAAACATATCAGGAATGTGAAATGGGTTTTCTCAGATATCATTCCAGATTACGTGCTTGGTCAAAACTCTTGCGCTTTGTATTTAAGCTTGCGGTATCATCTCCTACATCCGGATTACCTCTATTTCCGCATTAGGGAACTACAAAAGAATTTCAAGCTAAGTGTTGTTCTTTGCCATGTCGACGTGGAAGATACGGTGAAACCGTTGCTTGAAGTCACAAAAACCGCTCTACTTCATGATTGCACTCTATTGTGTGCCTGGAGCATGACAGAATGTGCCCGTTATTTGGAAACGATAAAAGTCTATGAAAACAAACCTGCAGATCTCATCCAAGGCCAAATGGATACAGATTACCTTTCACGGCTAAACCATTCTCTTACAAGCATTCGACATGTAAACAAGAGCGATGTAGTTACACTTGGTTCTACATTCGGGGTTGAGCTAAAAAGACCTTATGTCCAGTTATTGTGA - >AT3G05210.1
ATGGCGAACGAAGACGACGACGGTGAGAAATCCAGAAGTCTGCACCAACAGATTGCTAGAAAACCCAAAACCCAGATCGTGATTGGTGTGCCATCGTACCAGGAAGTTTTGGAAAGCTCACAGACGAAGTCCACGCCTCCATCTCTCTTCAAGCCTTCCCAGAGTTTCTCTCAGGCTTTCGCTTTCGTCAAGTCGTCCGACGTCTACTCTCCTCCTCCTCCTTCCTCCGCAGCCGCCTCTTCTTCTCAGCCGTCGGGCGCTTCTCAGGTGCCCCACAGTTCAAGCCAAACGCATCAAACTGATGGAGCCTCATCTTCTTCTACTCCTGTAGCCACTGGCTCTGTACCATCAAACACAACTCAAAATCGTAACGCTATTCTCGTTAGCCATCGACAGAAAGGAAACCCGCTTCTTAAACATATCAGGAATGTGAAATGGGTTTTCTCAGATATCATTCCAGATTACGTGCTTGGTCAAAACTCTTGCGCTTTGTATTTAAGCTTGCGGTATCATCTCCTACATCCGGATTACCTCTATTTCCGCATTAGGGAACTACAAAAGAATTTCAAGCTAAGTGTTGTTCTTTGCCATGTCGACGTGGAAGATACGGTGAAACCGTTGCTTGAAGTCACAAAAACCGCTCTACTTCATGATTGCACTCTATTGTGTGCCTGGAGCATGACAGAATGTGCCCGTTATTTGGAAACGATAAAAGTCTATGAAAACAAACCTGCAGATCTCATCCAAGGCCAAATGGATACAGATTACCTTTCACGGCTAAACCATTCTCTTACAAGCATTCGACATGTAAACAAGAGCGATGTAGTTACACTTGGTTCTACATTCGGGGTTGAGCTAAAAAGACCTTATGTCCAGTTATTGTGA
Protein Sequence
- >AT3G05210.2
MANEDDDGEKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPPSSAAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRNAILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGVELKRPYVQLL - >AT3G05210.1
MANEDDDGEKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPPSSAAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRNAILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGVELKRPYVQLL