Information report for AT3G05200
Gene Details
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Functional Descriptions
Functional Keywords
Literature and News
- Early elicitor induction in members of a novel multigene family coding for highly related RING-H2 proteins in Arabidopsis thaliana. DOI: 10.1023/a:1006267201855 ; PMID: 10480382
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Identification and characterisation of a melon genomic region containing a resistance gene cluster from a constructed BAC library. Microcolinearity between Cucumis melo and Arabidopsis thaliana. DOI: 10.1023/a:1022573230486 ; PMID: 12678558
- The carboxylesterase gene family from Arabidopsis thaliana. DOI: 10.1007/s00239-003-2492-8 ; PMID: 14738307
- Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling. DOI: 10.1104/pp.104.038844 ; PMID: 15194820
- The transcriptional innate immune response to flg22. Interplay and overlap with Avr gene-dependent defense responses and bacterial pathogenesis. DOI: 10.1104/pp.103.036749 ; PMID: 15181213
- Isolation and gene expression analysis of Arabidopsis thaliana mutants with constitutive expression of ATL2, an early elicitor-response RING-H2 zinc-finger gene. DOI: 10.1534/genetics.104.028043 ; PMID: 15238540
- Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome. DOI: 10.1111/j.1365-313X.2004.02295.x ; PMID: 15634198
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
- Quantitative phosphoproteomic analysis of plasma membrane proteins reveals regulatory mechanisms of plant innate immune responses. DOI: 10.1111/j.1365-313X.2007.03192.x ; PMID: 17651370
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The Arabidopsis ubiquitin ligases ATL31 and ATL6 control the defense response as well as the carbon/nitrogen response. DOI: 10.1007/s11103-012-9907-0 ; PMID: 22481162
- Calcium-dependent protein kinases from Arabidopsis show substrate specificity differences in an analysis of 103 substrates. DOI: 10.3389/fpls.2011.00036 ; PMID: 22645532
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Pale-green phenotype of atl31atl6 double mutant leaves is caused by disruption of 5-aminolevulinic acid biosynthesis in Arabidopsis thaliana. DOI: 10.1371/journal.pone.0117662 ; PMID: 25706562
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
- FERONIA phosphorylates E3 ubiquitin ligase ATL6 to modulate the stability of 14-3-3 proteins in response to the carbon/nitrogen ratio. DOI: 10.1093/jxb/erz378 ; PMID: 31433471
- The calcium-dependent protein kinase CPK28 is targeted by the ubiquitin ligases ATL31 and ATL6 for proteasome-mediated degradation to fine-tune immune signaling in Arabidopsis. DOI: 10.1093/plcell/koab242 ; PMID: 34599338
- Phosphorylation status of CPK28 affects its ubiquitination and protein stability. DOI: 10.1111/nph.18596 ; PMID: 36333900
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
Gene Resources
- UniProt: A0A178V9T3
- EMBL: CACRSJ010000106, LR881468, LUHQ01000003
- AlphaFoldDB: A0A178V9T3
- EnsemblPlants: AT3G05200.1
- Gramene: AT3G05200.1
- KEGG: ath:AT3G05200
- Orthologous matrix: GYYATNF
- ExpressionAtlas: AT3G05200
- InterPro: IPR001841, IPR013083, IPR053238
- PANTHER: PTHR14155, PTHR14155:SF263
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- SWISS-MODEL: A0A178V9T3
- Conserved Domain Database: cd16461
Homologs
- Actinidia chinensis Achn313101
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WB8Z1Y, arahy.Tifrunner.gnm1.ann1.466F5F
- Brassica napus BnaA07G0131000ZS
- Daucus carota DCAR_024960
- Lactuca sativa Lsat_1_v5_gn_4_138740
- Lotus japonicus Lj1g0003826
- Lupinus albus Lalb_Chr17g0345231
- Nicotiana attenuata A4A49_24378
- Oryza sativa OsRING-1;OsATL38, RAE3, OsBIRF1, NBIP1
- Solanum lycopersicum Solyc00g007220.3
- Solanum tuberosum PGSC0003DMG400023160
- Vitis vinifera VIT_07s0031g02250
Sequences
cDNA Sequence
- >AT3G05200.1
TTCGACATAATTTTACCAATTAGGCAACGACTTTCATTACACAAAATTGCGGAAACTATACAAAATTAGCCATGGATAAAAATGGAAAATAACAAACCGAAACTTGGCTGTAACAAAATCTGTTAGGGATGTTTCATAAAAATATACACCAAACTAATAAAATTCGAAACCAACCAAATGATAAAATTTTGCCTATGACCAAAAAAACATAAATGACACAATGTGAAAAGAAAAACATATTTGTTGATTGGAGGAACCTTCCTGTTGCCACGTGGAACTTGAAGTTTGACACAATTGCTGACACCACTGTACTACCTATCTCTTCTTTATGAATCTTCAAATGTCTTTTTTTACGCTATAAACTCACTTTCTTCTCCTCCAAGAGCCAAATAAACACACAAAAAAAAACTCAAAATCATGAGAAGCTCCGATCATATGGCGTTTGCCGGCGTTTTGCCGATTGTTTTCTTGCTTATATTATCATCAGCGGATCTAGCAGCGAGTCAATCACAGCCCGGTCCAACAAATCAACCGTATAACTACGGCAGACTAAGTCCAGCCATGGCAGTGATCGTCGTGATCCTAATCGCTGCTCTCTTCTTCATGGGCTTCTTCTCTATCTACTTCCGTCACTGCTCAGGCGTACCAGACGCCGGTGTTTCTCCAGCTGGTGGAGCTAGATCCAGAGCAACCGTCAACGCGGCGGCGCGTGGTCTCGACGTTTCAGTTGTCGAGACTTTTCCTACGTTCTTGTACTCAGATGTGAAAACGCAGAAGCTTGGTAAAGGAGAGTTAGAGTGTGCGATATGTTTGAACGAGTTCGAAGACGACGAAACGCTGCGTTTGCTTCCCAAGTGTGATCACGTGTTTCATCCGCACTGCATCGATGCTTGGCTCGAGGCTCACGTGACTTGTCCCGTTTGCAGAGCGAATCTTGCTGAACAGGTAGCTGAAGGTGAGTCAGTTGAACCGGGAGGAACTGAACCGGATCTTGAATTGCAGCAGGTTGTGGTGAATCCTGAACCGGTGGTTACTGCACCGGTACCGGAACAATTGGTGACTAGTGAAGTCGATTCGAGGAGATTACCTGGTGTACCGGTGGATCTTAAAAGAGTTAAATTCTCGAGATCGCATACGACGGGACATTCGGTGGTTCAACCGGGAGAATGTACCGAACGGTTTACTCTTCGGTTACCGGAAGATGTGAGGAAGAGGATAATGAAGGATTGGAAATTGAACCGGACGAATAGTCTTCTGGTTCTTCCTAGAGGAGGGAGTTCGAGGAGAGGTAAACCGATTGACCGGTCAAGGGCTCGGTCTGATCGATGGTTGTTTCGTAAAACGCCTTCGTTTCTGTGGAGGAGTCGTGATGATGGTTCGATTAGGTTAGGTGCTACCGGTAGCGTTCGAGCCAGTGCTGTACCGAATTCAACCGGTAGTGATTCGGTACGTGCAGGAGACCGGTGGGCTTTTCTTAGAAACGCGTCGTTTTTGTGGAGGAACTCTTCGGTACATGTGCCAAGAGGAGGAGTCAATAAAGACGGCGAAGGAACTTCGGTTAAATCGACCGGTGCAAGTGGCTCAACTAGCGGTTCGGTGAGATTACCGGTTTAGTTGACTTTTCTTTTCTCATCTTTTTCATTTGTTTTTGTTTGGGATTGTTGATAAATACGCAAATACATTTTCAATTTTTTAATTGAATTATCCTTGTTTTGTTTAAAATTCTCTGTAACGTACATATGAAGTCAGATCGAAAACGGATTCACTTTTGAAAACTAATGTATAAAAAAGCTTATAACAAAACAACGGACAATGATGTGAGGTGCGCTGTGGTGCAGGTGGGTTTCTCGGTTTTTCAATATTAAAAAAGTCGTATTCGTGGACAAAGAAT
CDS Sequence
- >AT3G05200.1
ATGAGAAGCTCCGATCATATGGCGTTTGCCGGCGTTTTGCCGATTGTTTTCTTGCTTATATTATCATCAGCGGATCTAGCAGCGAGTCAATCACAGCCCGGTCCAACAAATCAACCGTATAACTACGGCAGACTAAGTCCAGCCATGGCAGTGATCGTCGTGATCCTAATCGCTGCTCTCTTCTTCATGGGCTTCTTCTCTATCTACTTCCGTCACTGCTCAGGCGTACCAGACGCCGGTGTTTCTCCAGCTGGTGGAGCTAGATCCAGAGCAACCGTCAACGCGGCGGCGCGTGGTCTCGACGTTTCAGTTGTCGAGACTTTTCCTACGTTCTTGTACTCAGATGTGAAAACGCAGAAGCTTGGTAAAGGAGAGTTAGAGTGTGCGATATGTTTGAACGAGTTCGAAGACGACGAAACGCTGCGTTTGCTTCCCAAGTGTGATCACGTGTTTCATCCGCACTGCATCGATGCTTGGCTCGAGGCTCACGTGACTTGTCCCGTTTGCAGAGCGAATCTTGCTGAACAGGTAGCTGAAGGTGAGTCAGTTGAACCGGGAGGAACTGAACCGGATCTTGAATTGCAGCAGGTTGTGGTGAATCCTGAACCGGTGGTTACTGCACCGGTACCGGAACAATTGGTGACTAGTGAAGTCGATTCGAGGAGATTACCTGGTGTACCGGTGGATCTTAAAAGAGTTAAATTCTCGAGATCGCATACGACGGGACATTCGGTGGTTCAACCGGGAGAATGTACCGAACGGTTTACTCTTCGGTTACCGGAAGATGTGAGGAAGAGGATAATGAAGGATTGGAAATTGAACCGGACGAATAGTCTTCTGGTTCTTCCTAGAGGAGGGAGTTCGAGGAGAGGTAAACCGATTGACCGGTCAAGGGCTCGGTCTGATCGATGGTTGTTTCGTAAAACGCCTTCGTTTCTGTGGAGGAGTCGTGATGATGGTTCGATTAGGTTAGGTGCTACCGGTAGCGTTCGAGCCAGTGCTGTACCGAATTCAACCGGTAGTGATTCGGTACGTGCAGGAGACCGGTGGGCTTTTCTTAGAAACGCGTCGTTTTTGTGGAGGAACTCTTCGGTACATGTGCCAAGAGGAGGAGTCAATAAAGACGGCGAAGGAACTTCGGTTAAATCGACCGGTGCAAGTGGCTCAACTAGCGGTTCGGTGAGATTACCGGTTTAG
Protein Sequence
- >AT3G05200.1
MRSSDHMAFAGVLPIVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLELQQVVVNPEPVVTAPVPEQLVTSEVDSRRLPGVPVDLKRVKFSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRGKPIDRSRARSDRWLFRKTPSFLWRSRDDGSIRLGATGSVRASAVPNSTGSDSVRAGDRWAFLRNASFLWRNSSVHVPRGGVNKDGEGTSVKSTGASGSTSGSVRLPV