Information report for AT3G04770
Gene Details
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Functional Descriptions
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0022627 — part of — cytosolic small ribosomal subunit
- GO:0000028 — involved in — ribosomal small subunit assembly
- GO:0022626 — located in — cytosolic ribosome
- GO:0022627 — located in — cytosolic small ribosomal subunit
- GO:0005737 — located in — cytoplasm
- GO:0003735 — enables — structural constituent of ribosome
- GO:0002181 — involved in — cytoplasmic translation
- GO:0009507 — located in — chloroplast
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Computational prediction of miRNAs in Arabidopsis thaliana. DOI: 10.1101/gr.2908205 ; PMID: 15632092
- An expressed sequence tag (EST) library from developing fruits of an Hawaiian endemic mint (Stenogyne rugosa, Lamiaceae): characterization and microsatellite markers. DOI: 10.1186/1471-2229-6-16 ; PMID: 16928278
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Gene Resources
- UniProt: F4J4W3
- EMBL: CP002686
- AlphaFoldDB: F4J4W3
- EnsemblPlants: AT3G04770.1
- Gramene: AT3G04770.1
- ExpressionAtlas: AT3G04770
- InterPro: IPR001865, IPR005707, IPR018130
Sequences
cDNA Sequence
- >AT3G04770.1
GGTTTCGAAAGAAGAGAAAGAAACAGAGCGAAAAAACGAAAATGGCGGCGAACGGAGTAGCGACGGCGGGACGTCAGGTATCAGAGAAAGAAGCTGATATCCAGATGATGTTATCAGCCGATGTTCACCTTGGTACCAAAAACTGCAACTATCAGATGGAGCGTTATGTCTTCAAAAGACGCGACGACGGTATTTACATAATCAATCTTGGAAAGACATGGGACAAGCTTCAGATGGCTGCTAGGGTTATTGTAGCAATCGAAAACCCAAAAGACATAATTGTTCAATCAGCCAGGCCTTATGGACAAAGAGCTGTCTTGAAGTTTGCTCAGTACACTGGTGTTAATGCGATTGCTGGAAGACACACTCCTGGTACTTTCACTAACCAAATGCAGACTTCTTTCAGTGAGCCTAGGTTGTTGATTCTCACCGACCCAAGAACCGACCATCAGCCAATCAAGGAAGGTGCTTTGGGAAACATTCCAACTATTGCCTTCTGTGACACGGATTCTCCAATGGGATTTGTCGACATTGGTATTCCTGCTAACAACAAGGGAAAACACAGCATTGGTTGCTTGTTCTGGCTTTTGGCTCGTATGGTTCTCCAAATGCGTGGAACCATTCTCGCAGCTCAGAAATGGGATGTCATGGTAAACTCTAGAAATACTATCAGGACTTGTGTTTCTCCAACACCAGACAAAGATCTTGACTTGTTTCTGTTGTGTAGGTGGATCTGTTTTTCTACAGGGAGCCCGAAGAAGCAAAGCAAGAGGGTGATGAAGAAGCTGAAGTACAGGCCGATTATGGAATGGTTGGTGGTGACCAGTGGACCACTGCTCAAATATCTGATGCTGCATGGTCTGGTGAAGTCGAACAGCCAATTTCTGCTGCACCTGCAGTTGGCGTTACCGTTGCTGCTGGATGGGAGGCTGCTTCTGTTCCAGCTGCTGGTTGGGAGTAAAAGCTCTCTTATTAGTTTAGCTCGAACTCGGTTAGATGTAGACCTGATTTTTTTGTTTTCGAGATTTGGAGAGGATTAGGACCATATTAGCTTGCTTTACTTCTTGTCTCTTGAGAATTGCGACCATGAGATTAGGTGCATTTTTGCCGGTATTTCCAAGTTTCAACCATATAACGGTATTTTATCGTTGATTCTTTCATTGAATTGAACATTGGTCTTCTATTTAAGTCATATTATTCATTGATATTGC - >AT3G04770.2
GGTTTCGAAAGAAGAGAAAGAAACAGAGCGAAAAAACGAAAATGGCGGCGAACGGAGTAGCGACGGCGGGACGTCAGGTATCAGAGAAAGAAGCTGATATCCAGATGATGTTATCAGCCGATGTTCACCTTGGTACCAAAAACTGCAACTATCAGATGGAGCGTTATGTCTTCAAAAGACGCGACGACGGTATTTACATAATCAATCTTGGAAAGACATGGGACAAGCTTCAGATGGCTGCTAGGGTTATTGTAGCAATCGAAAACCCAAAAGACATAATTGTTCAATCAGCCAGGCCTTATGGACAAAGAGCTGTCTTGAAGTTTGCTCAGTACACTGGTGTTAATGCGATTGCTGGAAGACACACTCCTGGTACTTTCACTAACCAAATGCAGACTTCTTTCAGTGAGCCTAGGTTGTTGATTCTCACCGACCCAAGAACCGACCATCAGCCAATCAAGGAAGGTGCTTTGGGAAACATTCCAACTATTGCCTTCTGTGACACGGATTCTCCAATGGGATTTGTCGACATTGGTATTCCTGCTAACAACAAGGGAAAACACAGCATTGGTTGCTTGTTCTGGCTTTTGGCTCGTATGGTTCTCCAAATGCGTGGAACCATTCTCGCAGCTCAGAAATGGGATGTCATGGTAAACTCTAGAAATACTATCAGGACTTGTGTTTCTCCAACACCAGACAAAGATCTTGACTTGTTTCTGTTGTGTAGGTGGATCTGTTTTTCTACAGGGAGCCCGAAGAAGCAAAGCAAGAGGGTGATGAAGAAGCTGAAGTACAGGCCGATTATGGAATGGTTGGTGGTGACCAGTGGACCACTGCTCAAATATCTGATGCTGCATGGTCTGGTGAAGTCGAACAGCCAATTTCTGCTGCACCTGCAGTTGGCGTTACCGTTGCTGCTGGATGGGAGGCTGCTTCTGTTCCAGCTGCTGGTTGGGAGTAAAAGCTCTCTTATTAGTTTAGCTCGAACTCGGTTAGATGTAGACCTGATTTTTTTGTTTTCGAGATTTGGAGAGGATTAGGACCATATTAGCTTGCTTTACTTCTTGTCTCTTGAGAATTGCGACCATGAGATTAGGTGCATTTTTGCCGGTATTTCCAAGTTTCAACCATATAACGGTATTTTATCGTTGATTCTTTCATTGAATTGAACATTGGTCTTCTATTTAAGTCATATTATTCATTGATATTGC
CDS Sequence
- >AT3G04770.1
ATGGCGGCGAACGGAGTAGCGACGGCGGGACGTCAGGTATCAGAGAAAGAAGCTGATATCCAGATGATGTTATCAGCCGATGTTCACCTTGGTACCAAAAACTGCAACTATCAGATGGAGCGTTATGTCTTCAAAAGACGCGACGACGGTATTTACATAATCAATCTTGGAAAGACATGGGACAAGCTTCAGATGGCTGCTAGGGTTATTGTAGCAATCGAAAACCCAAAAGACATAATTGTTCAATCAGCCAGGCCTTATGGACAAAGAGCTGTCTTGAAGTTTGCTCAGTACACTGGTGTTAATGCGATTGCTGGAAGACACACTCCTGGTACTTTCACTAACCAAATGCAGACTTCTTTCAGTGAGCCTAGGTTGTTGATTCTCACCGACCCAAGAACCGACCATCAGCCAATCAAGGAAGGTGCTTTGGGAAACATTCCAACTATTGCCTTCTGTGACACGGATTCTCCAATGGGATTTGTCGACATTGGTATTCCTGCTAACAACAAGGGAAAACACAGCATTGGTTGCTTGTTCTGGCTTTTGGCTCGTATGGTTCTCCAAATGCGTGGAACCATTCTCGCAGCTCAGAAATGGGATGTCATGGTAAACTCTAGAAATACTATCAGGACTTGTGTTTCTCCAACACCAGACAAAGATCTTGACTTGTTTCTGTTGTGTAGGTGGATCTGTTTTTCTACAGGGAGCCCGAAGAAGCAAAGCAAGAGGGTGATGAAGAAGCTGAAGTACAGGCCGATTATGGAATGGTTGGTGGTGACCAGTGGACCACTGCTCAAATATCTGATGCTGCATGGTCTGGTGAAGTCGAACAGCCAATTTCTGCTGCACCTGCAGTTGGCGTTACCGTTGCTGCTGGATGGGAGGCTGCTTCTGTTCCAGCTGCTGGTTGGGAGTAAAAGCTCTCTTATTAGTTTAGCTCGAACTCGGTTAGATGTAGACCTGATTTTTTTGTTTTCGAGATTTGGAGAGGATTAG - >AT3G04770.2
ATGGCGGCGAACGGAGTAGCGACGGCGGGACGTCAGGTATCAGAGAAAGAAGCTGATATCCAGATGATGTTATCAGCCGATGTTCACCTTGGTACCAAAAACTGCAACTATCAGATGGAGCGTTATGTCTTCAAAAGACGCGACGACGGTATTTACATAATCAATCTTGGAAAGACATGGGACAAGCTTCAGATGGCTGCTAGGGTTATTGTAGCAATCGAAAACCCAAAAGACATAATTGTTCAATCAGCCAGGCCTTATGGACAAAGAGCTGTCTTGAAGTTTGCTCAGTACACTGGTGTTAATGCGATTGCTGGAAGACACACTCCTGGTACTTTCACTAACCAAATGCAGACTTCTTTCAGTGAGCCTAGGTTGTTGATTCTCACCGACCCAAGAACCGACCATCAGCCAATCAAGGAAGGTGCTTTGGGAAACATTCCAACTATTGCCTTCTGTGACACGGATTCTCCAATGGGATTTGTCGACATTGGTATTCCTGCTAACAACAAGGGAAAACACAGCATTGGTTGCTTGTTCTGGCTTTTGGCTCGTATGGTTCTCCAAATGCGTGGAACCATTCTCGCAGCTCAGAAATGGGATGTCATGGTAAACTCTAGAAATACTATCAGGACTTGTGTTTCTCCAACACCAGACAAAGATCTTGACTTGTTTCTGTTGTGTAGGTGGATCTGTTTTTCTACAGGGAGCCCGAAGAAGCAAAGCAAGAGGGTGATGAAGAAGCTGAAGTACAGGCCGATTATGGAATGGTTGGTGGTGACCAGTGGACCACTGCTCAAATATCTGATGCTGCATGGTCTGGTGAAGTCGAACAGCCAATTTCTGCTGCACCTGCAGTTGGCGTTACCGTTGCTGCTGGATGGGAGGCTGCTTCTGTTCCAGCTGCTGGTTGGGAGTAAAAGCTCTCTTATTAGTTTAGCTCGAACTCGGTTAGATGTAGACCTGATTTTTTTGTTTTCGAGATTTGGAGAGGATTAG
Protein Sequence
- >AT3G04770.1
MAANGVATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVNSRNTIRTCVSPTPDKDLDLFLLCRWICFSTGSPKKQSKRVMKKLKYRPIMEWLVVTSGPLLKYLMLHGLVKSNSQFLLHLQLALPLLLDGRLLLFQLLVGSKSSLISLARTRLDVDLIFLFSRFGED - >AT3G04770.2
MAANGVATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVNSRNTIRTCVSPTPDKDLDLFLLCRWICFSTGSPKKQSKRVMKKLKYRPIMEWLVVTSGPLLKYLMLHGLVKSNSQFLLHLQLALPLLLDGRLLLFQLLVGSKSSLISLARTRLDVDLIFLFSRFGED