Information report for AT3G04420
Gene Details
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Functional Descriptions
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0010114 — acts upstream of or within — response to red light
- GO:0009753 — acts upstream of or within — response to jasmonic acid
- GO:0098542 — acts upstream of or within — defense response to other organism
- GO:0009888 — acts upstream of or within — tissue development
- GO:0009416 — acts upstream of or within — response to light stimulus
- GO:0044248 — acts upstream of or within — cellular catabolic process
- GO:0005634 — located in — nucleus
- GO:0003677 — enables — DNA binding
- GO:0009620 — acts upstream of or within — response to fungus
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0000976 — enables — transcription cis-regulatory region binding
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DOI: 10.1093/dnares/10.6.239 ; PMID: 15029955
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination. DOI: 10.1104/pp.113.223511 ; PMID: 23858430
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- A membrane-associated NAC domain transcription factor XVP interacts with TDIF co-receptor and regulates vascular meristem activity. DOI: 10.1111/nph.16289 ; PMID: 31660587
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: F4J3P3
- EMBL: CP002686
- AlphaFoldDB: F4J3P3
- EnsemblPlants: AT3G04420.2
- Gramene: AT3G04420.2
- KEGG: ath:AT3G04420
- Orthologous matrix: FMHENRN
- ExpressionAtlas: AT3G04420
- InterPro: IPR003441, IPR036093
- PANTHER: PTHR31744, PTHR31744:SF233
- SUPFAM: SSF101941
- PROSITE: PS51005
- Gene3D: 2.170.150.80
- SWISS-MODEL: F4J3P3
Homologs
- Brassica napus GSBRNA2T00150485001
- Brassica oleracea XP_013639076.1
- Brassica rapa XP_009119654.1, XP_009119784.1
Sequences
cDNA Sequence
- >AT3G04420.2
TGAAATTTAGAATCTGCGCATATAAATACATAAAACCCTATTCGATCTCTTTCTTCTCCAATCTAAGTTGCAGAACCATGGCCAAAACTCTCTACTGCAATTTTTTTTGATCTTTTCTTTTACTTTTTCTCTTCGTAATCGCTGGTTCGAGAAATGGAGAATCCGGTGGGTTTAAGATTCCGTCCGACCGACAAGGAGATCGTCGTCGATTACCTCCGACCAAAAAACTCCGATAGGGACACGAGTCATGTTGATCGAGTCATTAGCACAGTCACTATCCGTAGCTTCGACCCTTGGGAGTTACCTTGCCAGTCTAGGATCAAACTGAAAGATGAGTCTTGGTGTTTCTTCAGCCCTAAGGAGAACAAATATGGCAGAGGTGATCAACAAATTAGAAAAACGAAATCTGGTTACTGGAAGATTACTGGCAAACCAAAGCCTATCTTGCGTAACCGCCAAGAGATCGGTGAGAAAAAGGTTTTGATGTTTTACATGAGTAAGGAACTTGGTGGATCCAAATCCGACTGGGTTATGCACGAGTACCATGCTTTCTCTCCTACTCAGATGATGATGACATATACAATATGTAAAGTTATGTTTAAGGGTGACGTGAGAGAGATTTCTTCTTCTTCTGCTTCTTATGGTAGTGAAATTGAGCAGAGTCGTGACTCTTTAATCCCTCTTCTTGTGAACGATTCTGAGGAAGAAGCTCAAATCGAGGATGCTATACCAATAGAGGAATGGGAAACATGGTTGACTGATGATGGTGTTGATGAGCAGGTGAATCATATTATGAATATGAAAGATGATCGCAACAACCACAGGCCTCAAAAGCCATTGACTGGTGTCTTGATTGACGATAGTAGTGATGATGATGATGATTCTGATTTGCTATCTCCAACAACAAATTCTATTGAAAATTCGAGCACTTGTGATAGTTTTGGTAGCTCAGACCAAATCAACTTAGTGTCACTAACTCAAGAGGTGAGCTTTATATTATCTCTTTTTTTCAGTGATACAAACAATCCCTAATGCTACTTTGTGCCAGCACTCG - >AT3G04420.1
TGAAATTTAGAATCTGCGCATATAAATACATAAAACCCTATTCGATCTCTTTCTTCTCCAATCTAAGTTGCAGAACCATGGCCAAAACTCTCTACTGCAATTTTTTTTGATCTTTTCTTTTACTTTTTCTCTTCGTAATCGCTGGTTCGAGAAATGGAGAATCCGGTGGGTTTAAGATTCCGTCCGACCGACAAGGAGATCGTCGTCGATTACCTCCGACCAAAAAACTCCGATAGGGACACGAGTCATGTTGATCGAGTCATTAGCACAGTCACTATCCGTAGCTTCGACCCTTGGGAGTTACCTTGCCAGTCTAGGATCAAACTGAAAGATGAGTCTTGGTGTTTCTTCAGCCCTAAGGAGAACAAATATGGCAGAGGTGATCAACAAATTAGAAAAACGAAATCTGGTTACTGGAAGATTACTGGCAAACCAAAGCCTATCTTGCGTAACCGCCAAGAGATCGGTGAGAAAAAGGTTTTGATGTTTTACATGAGTAAGGAACTTGGTGGATCCAAATCCGACTGGGTTATGCACGAGTACCATGCTTTCTCTCCTACTCAGATGATGATGACATATACAATATGTAAAGTTATGTTTAAGGGTGACGTGAGAGAGATTTCTTCTTCTTCTGCTTCTTATGGTAGTGAAATTGAGCAGAGTCGTGACTCTTTAATCCCTCTTCTTGTGAACGATTCTGAGGAAGAAGCTCAAATCGAGGATGCTATACCAATAGAGGAATGGGAAACATGGTTGACTGATGATGGTGTTGATGAGCAGGTGAATCATATTATGAATATGAAAGATGATCGCAACAACCACAGGCCTCAAAAGCCATTGACTGGTGTCTTGATTGACGATAGTAGTGATGATGATGATGATTCTGATTTGCTATCTCCAACAACAAATTCTATTGAAAATTCGAGCACTTGTGATAGTTTTGGTAGCTCAGACCAAATCAACTTAGTGTCACTAACTCAAGAGGTGAGCTTTATATTATCTCTTTTTTTCAGTGATACAAACAATCCCTAATGCTACTTTGTGCCAGCACTCG
CDS Sequence
- >AT3G04420.2
ATGGAGAATCCGGTGGGTTTAAGATTCCGTCCGACCGACAAGGAGATCGTCGTCGATTACCTCCGACCAAAAAACTCCGATAGGGACACGAGTCATGTTGATCGAGTCATTAGCACAGTCACTATCCGTAGCTTCGACCCTTGGGAGTTACCTTGCCAGTCTAGGATCAAACTGAAAGATGAGTCTTGGTGTTTCTTCAGCCCTAAGGAGAACAAATATGGCAGAGGTGATCAACAAATTAGAAAAACGAAATCTGGTTACTGGAAGATTACTGGCAAACCAAAGCCTATCTTGCGTAACCGCCAAGAGATCGGTGAGAAAAAGGTTTTGATGTTTTACATGAGTAAGGAACTTGGTGGATCCAAATCCGACTGGGTTATGCACGAGTACCATGCTTTCTCTCCTACTCAGATGATGATGACATATACAATATGTAAAGTTATGTTTAAGGGTGACGTGAGAGAGATTTCTTCTTCTTCTGCTTCTTATGGTAGTGAAATTGAGCAGAGTCGTGACTCTTTAATCCCTCTTCTTGTGAACGATTCTGAGGAAGAAGCTCAAATCGAGGATGCTATACCAATAGAGGAATGGGAAACATGGTTGACTGATGATGGTGTTGATGAGCAGGTGAATCATATTATGAATATGAAAGATGATCGCAACAACCACAGGCCTCAAAAGCCATTGACTGGTGTCTTGATTGACGATAGTAGTGATGATGATGATGATTCTGATTTGCTATCTCCAACAACAAATTCTATTGAAAATTCGAGCACTTGTGATAGTTTTGGTAGCTCAGACCAAATCAACTTAGTGTCACTAACTCAAGAGGTGAGCTTTATATTATCTCTTTTTTTCAGTGATACAAACAATCCCTAA - >AT3G04420.1
ATGGAGAATCCGGTGGGTTTAAGATTCCGTCCGACCGACAAGGAGATCGTCGTCGATTACCTCCGACCAAAAAACTCCGATAGGGACACGAGTCATGTTGATCGAGTCATTAGCACAGTCACTATCCGTAGCTTCGACCCTTGGGAGTTACCTTGCCAGTCTAGGATCAAACTGAAAGATGAGTCTTGGTGTTTCTTCAGCCCTAAGGAGAACAAATATGGCAGAGGTGATCAACAAATTAGAAAAACGAAATCTGGTTACTGGAAGATTACTGGCAAACCAAAGCCTATCTTGCGTAACCGCCAAGAGATCGGTGAGAAAAAGGTTTTGATGTTTTACATGAGTAAGGAACTTGGTGGATCCAAATCCGACTGGGTTATGCACGAGTACCATGCTTTCTCTCCTACTCAGATGATGATGACATATACAATATGTAAAGTTATGTTTAAGGGTGACGTGAGAGAGATTTCTTCTTCTTCTGCTTCTTATGGTAGTGAAATTGAGCAGAGTCGTGACTCTTTAATCCCTCTTCTTGTGAACGATTCTGAGGAAGAAGCTCAAATCGAGGATGCTATACCAATAGAGGAATGGGAAACATGGTTGACTGATGATGGTGTTGATGAGCAGGTGAATCATATTATGAATATGAAAGATGATCGCAACAACCACAGGCCTCAAAAGCCATTGACTGGTGTCTTGATTGACGATAGTAGTGATGATGATGATGATTCTGATTTGCTATCTCCAACAACAAATTCTATTGAAAATTCGAGCACTTGTGATAGTTTTGGTAGCTCAGACCAAATCAACTTAGTGTCACTAACTCAAGAGGTGAGCTTTATATTATCTCTTTTTTTCAGTGATACAAACAATCCCTAA
Protein Sequence
- >AT3G04420.2
MENPVGLRFRPTDKEIVVDYLRPKNSDRDTSHVDRVISTVTIRSFDPWELPCQSRIKLKDESWCFFSPKENKYGRGDQQIRKTKSGYWKITGKPKPILRNRQEIGEKKVLMFYMSKELGGSKSDWVMHEYHAFSPTQMMMTYTICKVMFKGDVREISSSSASYGSEIEQSRDSLIPLLVNDSEEEAQIEDAIPIEEWETWLTDDGVDEQVNHIMNMKDDRNNHRPQKPLTGVLIDDSSDDDDDSDLLSPTTNSIENSSTCDSFGSSDQINLVSLTQEVSFILSLFFSDTNNP - >AT3G04420.1
MENPVGLRFRPTDKEIVVDYLRPKNSDRDTSHVDRVISTVTIRSFDPWELPCQSRIKLKDESWCFFSPKENKYGRGDQQIRKTKSGYWKITGKPKPILRNRQEIGEKKVLMFYMSKELGGSKSDWVMHEYHAFSPTQMMMTYTICKVMFKGDVREISSSSASYGSEIEQSRDSLIPLLVNDSEEEAQIEDAIPIEEWETWLTDDGVDEQVNHIMNMKDDRNNHRPQKPLTGVLIDDSSDDDDDSDLLSPTTNSIENSSTCDSFGSSDQINLVSLTQEVSFILSLFFSDTNNP