Gene Details:
- Gene ID: AT3G04230
- Gene Symbol: uS9y
- Gene Name: Ribosomal Protein uS9y
- Description: Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11)
- TAIR Accession: locus:2103035
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0022627 — located in — cytosolic small ribosomal subunit
- GO:0003723 — enables — RNA binding
- GO:0005737 — located in — cytoplasm
- GO:0022626 — located in — cytosolic ribosome
- GO:0005730 — located in — nucleolus
- GO:0000462 — involved in — maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
- GO:0022627 — part of — cytosolic small ribosomal subunit
- GO:0006412 — involved in — translation
- GO:0003735 — enables — structural constituent of ribosome
Literature:
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Sequences:
cDNA Sequence
- >AT3G04230.1
CAACGAAAGTGTTTTTCCATCTAATCGAAATTGACGAAACCCGTTGGTTAACCAGAAATCTAGCCGGTTAATCTAAGCTATGTAGTAATAAATCATCATGTAACAGGCCATAGTTACCCTAATTTTATGGGCCTTCAAATTCAGCCGATCATCATGTTGACCAATAAAAGCTTAACGGATTAGAGTTTTTTGCTCTTCTCATGTAATCAAATCCCTGCAGAAAAAGCACAAAAATCATAAAACCCTAGCAATGGCGACCCAACCGGCGAAAGAGTCTGTTCAATGTTTCGGAAGGAAGAAGACGGCAACAGCAGTCACCTACTGCAAACGGGGCTCGGGCATGATTAAGCTCAACGGTTCGCCGATCGAGCTTTATCAGCCAGAGATCCTCCGATTCAAGATCTTCGAGCCAGTCCTTCTCCTCGGGAAACACCGTTTCGCCGGAGTTGACATGAGGATCCGTGCCACGGGCGGTGGTAACACATCTCGGGTCTACGCAATCCGTCAGAGTATCGCTAAGGCCCTCGTTGCTTACTACCAGAAGTACGTTGATGAGCAGTCGAAGAAGGAGATCAAGGACATCTTGATGAGGTACGATAGGACTCTTCTTGTTGCGGATCCGAGAAGGTGCGAGTCGAAGAAGTTTGGTGGTCCTGGTGCTCGTGCTCGTTTCCAGAAGAGTTACCGTTAGATTCTGGTTTGATTTTTTGTTTCTGTATCAACGTTTTGGGATTATGATGTTGAAATTGTGAGACTTGGTTTCTCTTTTGCGTTTTATTTTCAATGGTTATTGGATAATGTTTCTACTATCGAAAAGTTCTCACAAGCTGTGTTTAGTGTTTACGTAGAATGCTATTGATTCTTCGTTCTTCTTCTCCCTCTCACTTTGCAATTTCAGCCTCCTCTAAATCGTTGCAAAGGAAACGTTGAACATAAACTGAGGTTAATGCGTTTACTCTCTAATATGCTGGTTGCTGAATCAGTTAGTT
CDS Sequence
- >AT3G04230.1
ATGGCGACCCAACCGGCGAAAGAGTCTGTTCAATGTTTCGGAAGGAAGAAGACGGCAACAGCAGTCACCTACTGCAAACGGGGCTCGGGCATGATTAAGCTCAACGGTTCGCCGATCGAGCTTTATCAGCCAGAGATCCTCCGATTCAAGATCTTCGAGCCAGTCCTTCTCCTCGGGAAACACCGTTTCGCCGGAGTTGACATGAGGATCCGTGCCACGGGCGGTGGTAACACATCTCGGGTCTACGCAATCCGTCAGAGTATCGCTAAGGCCCTCGTTGCTTACTACCAGAAGTACGTTGATGAGCAGTCGAAGAAGGAGATCAAGGACATCTTGATGAGGTACGATAGGACTCTTCTTGTTGCGGATCCGAGAAGGTGCGAGTCGAAGAAGTTTGGTGGTCCTGGTGCTCGTGCTCGTTTCCAGAAGAGTTACCGTTAG
Protein Sequence
- >AT3G04230.1
MATQPAKESVQCFGRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLGKHRFAGVDMRIRATGGGNTSRVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILMRYDRTLLVADPRRCESKKFGGPGARARFQKSYR