Information report for AT3G04090
Gene Details
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Functional Descriptions
- PO:0000282 — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009015 — portion of vascular tissue — porción de tejido vascular (Spanish, exact), vascular tissue (exact), 維管束細胞の一部 (Japanese, exact), vascular system (related)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009066 — anther — antera (Spanish, exact), 半葯,花粉のう (Japanese, exact), Poaceae anther (narrow), Zea anther (narrow)
- PO:0009073 — stigma — estigma (Spanish, exact), stigmas (exact, plural), stigmata (exact, plural), 柱頭 (Japanese, exact), Poaceae stigma (narrow), Zea stigma (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005783 — located in — endoplasmic reticulum
- GO:0055085 — acts upstream of or within — transmembrane transport
- GO:0055085 — involved in — transmembrane transport
- GO:0015250 — enables — water channel activity
- GO:0006833 — acts upstream of or within — water transport
Functional Keywords
Literature and News
- The complete set of genes encoding major intrinsic proteins in Arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants. DOI: 10.1104/pp.126.4.1358 ; PMID: 11500536
- The potassium-dependent transcriptome of Arabidopsis reveals a prominent role of jasmonic acid in nutrient signaling. DOI: 10.1104/pp.104.046482 ; PMID: 15347784
- Natural genetic variation in whole-genome expression in Arabidopsis thaliana: the impact of physiological QTL introgression. DOI: 10.1111/j.1365-294X.2006.02774.x ; PMID: 16626458
- Comparison of gene expression in segregating families identifies genes and genomic regions involved in a novel adaptation, zinc hyperaccumulation. DOI: 10.1111/j.1365-294X.2006.02981.x ; PMID: 16911220
- and pH-insensitive glucose and sucrose accumulation detected by FRET nanosensors in Arabidopsis root tips. DOI: 10.1111/j.1365-313X.2008.03652.x ; PMID: 18702670
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The ER-localized aquaporin SIP2;1 is involved in pollen germination and pollen tube elongation in Arabidopsis thaliana. DOI: 10.1007/s11103-019-00865-3 ; PMID: 30963359
- Two aquaporins, SIP1;1 and PIP1;2, mediate water transport for pollen hydration in the Arabidopsis pistil. DOI: 10.5511/plantbiotechnology.20.1207a ; PMID: 34177327
- The complete set of genes encoding major intrinsic proteins in Arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants. DOI: 10.1104/pp.126.4.1358 ; PMID: 11500536
Gene Resources
- UniProt: A0A178V5Y6
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178V5Y6
- EnsemblPlants: AT3G04090.1
- Gramene: AT3G04090.1
- KEGG: ath:AT3G04090
- Orthologous matrix: FGWAYVY
- ExpressionAtlas: AT3G04090
- InterPro: IPR000425, IPR023271, IPR044222
- PANTHER: PTHR46739, PTHR46739:SF3
- SUPFAM: SSF81338
- Gene3D: 1.20.1080.10
- OrthoDB: A0A178V5Y6
- SWISS-MODEL: A0A178V5Y6
Homologs
- Daucus carota DCAR_019902
Sequences
cDNA Sequence
- >AT3G04090.1
GTTAATCATTCAAAGATATCTTCGTTTCATAAAACAAGAAAAAAACAAAAAAAAACAAATTTTCAAAAAGAAAAAAATCTATTTGAGGAGAAAAATAGCTGTGAGAGAGAAAGCTAAAGAGGCGACGTACCACCCACCTAACCACAACCAGATCCCCAAAAGACAGAGAACTTTCTCGATACGAACGCCAAAGAGAAGAAGACGAAGACGAAGATGATGGGTGTGTTGAAGTCGGCGATTGGGGATATGTTGATGACCTTCTCTTGGGTTGTCCTCTCCGCTACCTTTGGAATTCAGACGGCGGCGATTATCTCCGCCGGTGATTTTCAGGCAATCACTTGGGCTCCGTTGGTGATTTTGACGTCGTTGATTTTCGTCTACGTCTCGATCTTCACCGTTATCTTCGGTAGCGCTAGCTTCAATCCTACCGGAAGCGCTGCCTTTTATGTCGCCGGTGTCCCCGGAGATACTCTTTTCTCCTTGGCGATTAGATTACCTGCTCAGGCAATTGGTGCTGCAGGAGGTGCATTGGCGATCATGGAGTTCATACCAGAGAAATACAAGCATATGATTGGAGGTCCTTCTCTTCAGGTTGATGTGCACACTGGAGCTATTGCTGAAACGATCTTAAGTTTTGGTATTACCTTTGCGGTTTTGCTAATTATCCTCAGGGGTCCACGGAGATTGCTTGCTAAGACGTTCTTGCTTGCTCTTGCAACCATCTCATTTGTTGTCGCCGGATCTAAATACACTGGACCAGCCATGAATCCTGCCATTGCGTTTGGATGGGCATACATGTACAGCTCCCACAACACATGGGACCATATCTACGTCTACTGGATCAGTTCTTTCGTAGGAGCATTATCTGCTGCATTGCTTTTCCGTTCTATCTTCCCGCCACCTCGGCCCCAGAAGAAGAAACAAAAGAAAGCCTGAGGAAAATAAAACAATTGGGAGAATACCGGTCAGATTCTTCACCGGTTTGGGCTGTAGAAAGATTCACAAAGCTGTTCCATTCTAAAATAAGGAGACCAACAACAACAAAAAGTCAAAAGTCTCCTTGTCATTGTTTAGATCCACACGCTTATTTTACAGATTTGTGCGACGTAACTTTTCTCTTTTATGTTCATAAATCATTCAGACTCTCTTCCGGTTTAGAAACATTTATGATTACATGGCTGGTTTAGTTTGGTTTATTATCGGTTCACTCTCTATTCTGGTTCTGATTTCTGACAACAAATCAAAGGCAAAAGTTGTGGATTTCCATCCACAAAATTTGGGAATTGGGCCTC
CDS Sequence
- >AT3G04090.1
ATGATGGGTGTGTTGAAGTCGGCGATTGGGGATATGTTGATGACCTTCTCTTGGGTTGTCCTCTCCGCTACCTTTGGAATTCAGACGGCGGCGATTATCTCCGCCGGTGATTTTCAGGCAATCACTTGGGCTCCGTTGGTGATTTTGACGTCGTTGATTTTCGTCTACGTCTCGATCTTCACCGTTATCTTCGGTAGCGCTAGCTTCAATCCTACCGGAAGCGCTGCCTTTTATGTCGCCGGTGTCCCCGGAGATACTCTTTTCTCCTTGGCGATTAGATTACCTGCTCAGGCAATTGGTGCTGCAGGAGGTGCATTGGCGATCATGGAGTTCATACCAGAGAAATACAAGCATATGATTGGAGGTCCTTCTCTTCAGGTTGATGTGCACACTGGAGCTATTGCTGAAACGATCTTAAGTTTTGGTATTACCTTTGCGGTTTTGCTAATTATCCTCAGGGGTCCACGGAGATTGCTTGCTAAGACGTTCTTGCTTGCTCTTGCAACCATCTCATTTGTTGTCGCCGGATCTAAATACACTGGACCAGCCATGAATCCTGCCATTGCGTTTGGATGGGCATACATGTACAGCTCCCACAACACATGGGACCATATCTACGTCTACTGGATCAGTTCTTTCGTAGGAGCATTATCTGCTGCATTGCTTTTCCGTTCTATCTTCCCGCCACCTCGGCCCCAGAAGAAGAAACAAAAGAAAGCCTGA
Protein Sequence
- >AT3G04090.1
MMGVLKSAIGDMLMTFSWVVLSATFGIQTAAIISAGDFQAITWAPLVILTSLIFVYVSIFTVIFGSASFNPTGSAAFYVAGVPGDTLFSLAIRLPAQAIGAAGGALAIMEFIPEKYKHMIGGPSLQVDVHTGAIAETILSFGITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYTGPAMNPAIAFGWAYMYSSHNTWDHIYVYWISSFVGALSAALLFRSIFPPPRPQKKKQKKA