Information report for AT3G03960
Gene Details
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Functional Descriptions
- GO:0005737 — located in — cytoplasm
- GO:0016887 — enables — ATP hydrolysis activity
- GO:0006457 — involved in — protein folding
- GO:0051082 — enables — unfolded protein binding
- GO:0005832 — part of — chaperonin-containing T-complex
- GO:0005515 — enables — protein binding
- GO:0009506 — located in — plasmodesma
- GO:0005829 — located in — cytosol
- GO:0044183 — enables — protein folding chaperone
- GO:0009507 — located in — chloroplast
- GO:0051050 — involved in — positive regulation of transport
Functional Keywords
Literature and News
- Loss of TIP1;1 aquaporin in Arabidopsis leads to cell and plant death. DOI: 10.1111/j.1365-313X.2004.02265.x ; PMID: 15584951
- Proteomic investigation of the effect of salicylic acid on Arabidopsis seed germination and establishment of early defense mechanisms. DOI: 10.1104/pp.106.082057 ; PMID: 16679420
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Functional characterization of chaperonin containing T-complex polypeptide-1 and its conserved and novel substrates in Arabidopsis. DOI: 10.1093/jxb/erz099 ; PMID: 30825377
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178V993
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178V993
- EnsemblPlants: AT3G03960.1
- Gramene: AT3G03960.1
- KEGG: ath:AT3G03960
- Orthologous matrix: WGLKYAV
- ExpressionAtlas: AT3G03960
- InterPro: IPR002194, IPR002423, IPR012721
- PANTHER: PTHR11353
- SUPFAM: SSF48592, SSF52029, SSF54849
- PROSITE: PS00750, PS00751
- Gene3D: 1.10.560.10, 3.30.260.10, 3.50.7.10
- OrthoDB: A0A178V993
- SWISS-MODEL: A0A178V993
- Conserved Domain Database: cd03341
Homologs
- Gossypium hirsutum GHCU
Sequences
cDNA Sequence
- >AT3G03960.1
CTCTATTCGTCCCTAAACTTTCATATAATACAACTTTCACCCCTAAAGATTTAAGATCTCAATTTTTGGCCCCCATCCCCTTAAAATTTAAAACGACACCGTTGTGAACTCCCATTTTAAAACCTCGAAAGTTTTCTAGGGCAATCTCGGCCACTTTTACTCACAGAAAACCTTCTCTCTAAACTTCTTCGAAAATCTCACAGAGCTTCTTCTTCTTCGCTTTTAGGGTTTTTGCTCTATTGTTTCGAGTGACCCAACTTCGAAGCTTATAGATCGTTACCTTAGAAAATGGTGGGTATGTCGATGCAGCCATATGGTATTCAATCGATGCTTAAAGAAGGTTACAGGCATCTCTCTGGTCTCGACGAAGCCGTCATTAAGAACATTGAAGCTTGCAAGGAGCTCTCCACCATTACTCGCACCTCTCTCGGTCCCAATGGAATGAATAAAATGGTTATCAATCATTTGGACAAACTGTTTGTCACAAATGACGCTGCTACTATAGTGAATGAGCTCGAGATTCAGCACCCGGCTGCTAAACTTCTGGTTTTAGCTGCTAAGGCTCAGCAAGAAGAAATCGGAGATGGAGCTAATCTGACAATCTCCTTTGCTGGTGAACTTCTTCAAAACGCTGAGGAGCTTATCAGGATGGGACTTCATCCGAGTGAGATCATTAGTGGATATACTAAAGCTGTCAGCAAGGCTGTTGAAATACTGGAACAACTGGTTGAGACTGGTTCTGAGACCATGGATGTACGTAACAAGGATGAAGTTATTTCTCGGATGAGAGCAGCTGTTGCAAGCAAGCAGTTTGGGCAAGAGGAAATAATTTGCTCTTTAGTTACTGACGCATGTATTCAAGTCTGCCCAAAGAATCCAACGAATTTCAATGTGGATAATGTTCGTGTTTCCAAGCTTTTGGGAGGAGGCTTGCACAATTCTTGCATAGTCCGTGGTATGGTCTTGAAAAGTGATGCTGTTGGTAGCATTAAGCGAATGGAGAAAGCGAAGGTTGCTGTATTTGCTGGTGGCGTTGATACCACTGCAACAGAGACCAAAGGAACTGTCCTCATTCATAGTGCTGAGCAGCTAGAGAACTATGCAAAGACAGAGGAAGCTAAAGTTGAGGAGTTGATTAAAGCAGTTGCGGAATCAGGAGCCAAAGTCATTGTTAGTGGAGGATCAATTGGAGAAATGGCATTGCATTTCTGTGAGCGCTACAAGATAATGGTATTGAAAATCAGCTCAAAGTTTGAACTGAGGCGTTTTTGCCGTACAGCGGGGGCTGTCGCCCATTTGAAGCTTAGCCGGCCAAGCCCTGAAGATCTTGGATATGTTGATTCTATATCGGTTGAGGAAATTGGTGGTGTGACAGTCACGATTGCAAGAAACGAGGAAGGTGGTAACTCCATCTCCACTGTGGTCTTGCGTGGAAGCACAGATAGCATTTTGGACGACCTTGAGAGAGCTGTTGATGATGGAGTTAACACATACAAGGCCATGTGCAGAGACAGCCGTATTGTTCCCGGGGCTGCAGCGACTGAAATAGAGTTGGCTCAAAGGTTGAAGGAATACGCCAATGCAGAAATAGGGTTGGACAAATATGCCATCACCAAATACGCTGAGAGTTTTGAGTTTGTACCCAAGACCCTTGCAGATAATGCTGGCCTCAATGCGATGGAAATCATAGCCGCTCTGTACACTGGACATGGATCTGGAAACACAAAACTAGGCATTGACTTAGAGGAAGGTGCTTGTAAAGATGTTTCAGAGACAAAAGTATGGGATCTTTTTGCAACCAAGTTATTTGCCCTTAAATATGCTTCAGATGCTGCATGCACTGTACTTCGTGTAGACCAGATTATAATGGCGAAACCAGCAGGTGGACCAAGGAGAGATGCAGCTCAAGCTGCAGGTGCTGGTGCGGAGGAAGACTAAGCCGGAGAACAAATACCTCGTAGTGAAACTCTCTTCTTTTGTAACCTTCTGTTCCTGAAAGTCTGAGAAAATTTTGGTATGTCTCAGTTTAAGATTTGTGATCTTTGTAACGCACCACCAACTTAAGTGTTTTGCCTTCTTTTTCTGTTTTGCCTTGTTTTGGCTCGTCTCAACACTCAGATTTTCCGGTTTAGCTAGTGAAATTATTACTAGGATTTTTGGCTTAACTCTGTATTAATGTCAATTTGGTTTCTATTTGAATCGACTTTTGAACAAGTGACAAAATC
CDS Sequence
- >AT3G03960.1
ATGGTGGGTATGTCGATGCAGCCATATGGTATTCAATCGATGCTTAAAGAAGGTTACAGGCATCTCTCTGGTCTCGACGAAGCCGTCATTAAGAACATTGAAGCTTGCAAGGAGCTCTCCACCATTACTCGCACCTCTCTCGGTCCCAATGGAATGAATAAAATGGTTATCAATCATTTGGACAAACTGTTTGTCACAAATGACGCTGCTACTATAGTGAATGAGCTCGAGATTCAGCACCCGGCTGCTAAACTTCTGGTTTTAGCTGCTAAGGCTCAGCAAGAAGAAATCGGAGATGGAGCTAATCTGACAATCTCCTTTGCTGGTGAACTTCTTCAAAACGCTGAGGAGCTTATCAGGATGGGACTTCATCCGAGTGAGATCATTAGTGGATATACTAAAGCTGTCAGCAAGGCTGTTGAAATACTGGAACAACTGGTTGAGACTGGTTCTGAGACCATGGATGTACGTAACAAGGATGAAGTTATTTCTCGGATGAGAGCAGCTGTTGCAAGCAAGCAGTTTGGGCAAGAGGAAATAATTTGCTCTTTAGTTACTGACGCATGTATTCAAGTCTGCCCAAAGAATCCAACGAATTTCAATGTGGATAATGTTCGTGTTTCCAAGCTTTTGGGAGGAGGCTTGCACAATTCTTGCATAGTCCGTGGTATGGTCTTGAAAAGTGATGCTGTTGGTAGCATTAAGCGAATGGAGAAAGCGAAGGTTGCTGTATTTGCTGGTGGCGTTGATACCACTGCAACAGAGACCAAAGGAACTGTCCTCATTCATAGTGCTGAGCAGCTAGAGAACTATGCAAAGACAGAGGAAGCTAAAGTTGAGGAGTTGATTAAAGCAGTTGCGGAATCAGGAGCCAAAGTCATTGTTAGTGGAGGATCAATTGGAGAAATGGCATTGCATTTCTGTGAGCGCTACAAGATAATGGTATTGAAAATCAGCTCAAAGTTTGAACTGAGGCGTTTTTGCCGTACAGCGGGGGCTGTCGCCCATTTGAAGCTTAGCCGGCCAAGCCCTGAAGATCTTGGATATGTTGATTCTATATCGGTTGAGGAAATTGGTGGTGTGACAGTCACGATTGCAAGAAACGAGGAAGGTGGTAACTCCATCTCCACTGTGGTCTTGCGTGGAAGCACAGATAGCATTTTGGACGACCTTGAGAGAGCTGTTGATGATGGAGTTAACACATACAAGGCCATGTGCAGAGACAGCCGTATTGTTCCCGGGGCTGCAGCGACTGAAATAGAGTTGGCTCAAAGGTTGAAGGAATACGCCAATGCAGAAATAGGGTTGGACAAATATGCCATCACCAAATACGCTGAGAGTTTTGAGTTTGTACCCAAGACCCTTGCAGATAATGCTGGCCTCAATGCGATGGAAATCATAGCCGCTCTGTACACTGGACATGGATCTGGAAACACAAAACTAGGCATTGACTTAGAGGAAGGTGCTTGTAAAGATGTTTCAGAGACAAAAGTATGGGATCTTTTTGCAACCAAGTTATTTGCCCTTAAATATGCTTCAGATGCTGCATGCACTGTACTTCGTGTAGACCAGATTATAATGGCGAAACCAGCAGGTGGACCAAGGAGAGATGCAGCTCAAGCTGCAGGTGCTGGTGCGGAGGAAGACTAA
Protein Sequence
- >AT3G03960.1
MVGMSMQPYGIQSMLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKAVSKAVEILEQLVETGSETMDVRNKDEVISRMRAAVASKQFGQEEIICSLVTDACIQVCPKNPTNFNVDNVRVSKLLGGGLHNSCIVRGMVLKSDAVGSIKRMEKAKVAVFAGGVDTTATETKGTVLIHSAEQLENYAKTEEAKVEELIKAVAESGAKVIVSGGSIGEMALHFCERYKIMVLKISSKFELRRFCRTAGAVAHLKLSRPSPEDLGYVDSISVEEIGGVTVTIARNEEGGNSISTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELAQRLKEYANAEIGLDKYAITKYAESFEFVPKTLADNAGLNAMEIIAALYTGHGSGNTKLGIDLEEGACKDVSETKVWDLFATKLFALKYASDAACTVLRVDQIIMAKPAGGPRRDAAQAAGAGAEED