Information report for AT2G45220
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0000263 — non-hair root epidermal cell — atrichoblast (exact), atricoblasto (Spanish, exact), 非毛根形成細胞、アトリコブラスト (Japanese, exact), non-hair cell (broad)
- SALK_059908 — Defective induction of PME activity upon infection with B. cinerea. Fungal infection symptoms twice as high.
- SALK_059908 — Strong reduction in the cell wall pectin fraction, expressed by the amounts of galacturonic acid, strong reductions in photosynthetic capacity.
- pme17-3 — Defective induction of PME activity upon infection with B. cinerea. Fungal infection symptoms twice as high.
Functional Keywords
- root , plant embryo , stamen , sepal , flower , flower , non-hair root epidermal cell
Literature and News
- Transcriptional regulation of secondary growth in Arabidopsis thaliana. DOI: 10.1093/jxb/erg304 ; PMID: 14585825
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling. DOI: 10.1104/pp.104.038844 ; PMID: 15194820
- Gene expression signatures from three genetically separable resistance gene signaling pathways for downy mildew resistance. DOI: 10.1104/pp.104.040444 ; PMID: 15181204
- Lipid utilization, gluconeogenesis, and seedling growth in Arabidopsis mutants lacking the glyoxylate cycle enzyme malate synthase. DOI: 10.1074/jbc.M407380200 ; PMID: 15272001
- CINNAMYL ALCOHOL DEHYDROGENASE-C and -D are the primary genes involved in lignin biosynthesis in the floral stem of Arabidopsis. DOI: 10.1105/tpc.105.030767 ; PMID: 15937231
- Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. DOI: 10.1111/j.1365-313X.2005.02568.x ; PMID: 16262716
- Genome-wide transcriptional analysis of the Arabidopsis thaliana interaction with the plant pathogen Pseudomonas syringae pv. tomato DC3000 and the human pathogen Escherichia coli O157:H7. DOI: 10.1111/j.1365-313X.2006.02725.x ; PMID: 16553894
- Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0261-9 ; PMID: 16622707
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Whirly transcription factors: defense gene regulation and beyond. DOI: 10.1016/j.tplants.2004.12.008 ; PMID: 15708347
- Arabidopsis transcriptome changes in response to phloem-feeding silverleaf whitefly nymphs. Similarities and distinctions in responses to aphids. DOI: 10.1104/pp.106.090662 ; PMID: 17189325
- Suppression by ABA of salicylic acid and lignin accumulation and the expression of multiple genes, in Arabidopsis infected with Pseudomonas syringae pv. tomato. DOI: 10.1007/s10142-006-0041-4 ; PMID: 17149585
- PIP5K9, an Arabidopsis phosphatidylinositol monophosphate kinase, interacts with a cytosolic invertase to negatively regulate sugar-mediated root growth. DOI: 10.1105/tpc.106.045658 ; PMID: 17220200
- Dual regulation role of GH3.5 in salicylic acid and auxin signaling during Arabidopsis-Pseudomonas syringae interaction. DOI: 10.1104/pp.107.106021 ; PMID: 17704230
- Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2. DOI: 10.1104/pp.107.110908 ; PMID: 18192438
- Simultaneous interaction of Arabidopsis thaliana with Bradyrhizobium Sp. strain ORS278 and Pseudomonas syringae pv. tomato DC3000 leads to complex transcriptome changes. DOI: 10.1094/MPMI-21-2-0244 ; PMID: 18184068
- The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen. DOI: 10.1016/j.ydbio.2007.12.016 ; PMID: 18252252
- A comparison of leaf and petal senescence in wallflower reveals common and distinct patterns of gene expression and physiology. DOI: 10.1104/pp.108.120402 ; PMID: 18539778
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- A gene regulatory network for root epidermis cell differentiation in Arabidopsis. DOI: 10.1371/journal.pgen.1002446 ; PMID: 22253603
- Arabidopsis PECTIN METHYLESTERASEs contribute to immunity against Pseudomonas syringae. DOI: 10.1104/pp.113.227637 ; PMID: 24367018
- Arabidopsis PECTIN METHYLESTERASE17 is co-expressed with and processed by SBT3.5, a subtilisin-like serine protease. DOI: 10.1093/aob/mcu035 ; PMID: 24665109
- Arabidopsis PME17 Activity can be Controlled by Pectin Methylesterase Inhibitor4. DOI: 10.4161/15592324.2014.983351 ; PMID: 25826258
- Three Pectin Methylesterase Inhibitors Protect Cell Wall Integrity for Arabidopsis Immunity to Botrytis. DOI: 10.1104/pp.16.01185 ; PMID: 28082716
- Protein and metabolite composition of Arabidopsis stress granules. DOI: 10.1111/nph.15690 ; PMID: 30664249
- Reduced photosynthesis in Arabidopsis thaliana atpme17.2 and atpae11.1 mutants is associated to altered cell wall composition. DOI: 10.1111/ppl.13186 ; PMID: 32770751
- AtPME17 is a functional Arabidopsis thaliana pectin methylesterase regulated by its PRO region that triggers PME activity in the resistance to Botrytis cinerea. DOI: 10.1111/mpp.13002 ; PMID: 33029918
- Arabidopsis thaliana Cuticle Composition Contributes to Differential Defense Response to Botrytis cinerea. DOI: 10.3389/fpls.2021.738949 ; PMID: 34804086
- The Plant Invertase/Pectin Methylesterase Inhibitor Superfamily. DOI: 10.3389/fpls.2022.863892 ; PMID: 35401607
- Characterization of the pectin methylesterase-like gene AtPME3: a new member of a gene family comprising at least 12 genes in Arabidopsis thaliana. DOI: 10.1016/s0378-1119(98)00431-4 ; PMID: 9767082
- Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0261-9 ; PMID: 16622707
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
Gene Resources
Homologs
- Actinidia chinensis CEY00_Acc00481
- Brassica napus BnaC04G0056800ZS, BnaC04G0056600ZS
- Brassica oleracea Bo4g024410
- Brassica rapa Bra000382
- Glycine max Glyma.01G138100, Glyma.01G138000, Glyma.01G137700, Glyma.03G029000, Glyma.03G029100
- Gossypium hirsutum Gohir.D11G084500, Gohir.A11G079800
- Juglans regia Jr05_03570
- Manihot esculenta MANES_05G047700
- Populus trichocarpa POPTR_002G145500v3
- Sesamum indicum SIN_1013945
- Vitis vinifera VIT_15s0048g00510
Sequences
cDNA Sequence
- >AT2G45220.1
TGATCGTTACCAATCCATTGGTTGGTATAAACATATATACTTTTCTTTTTTGCTTCAACTACAATGAAATTACATATTAATATATTTGATTATTAATTTAAATTAAAAAACATAAGTCCCCACATCTATATAAACACATCGATTCAAGACTCAAATCTCATCAATCAAAATCTTCAAACACAAACTTCTCGTTTCTCAAAACATTTGGTCTTATGATGGCTTTTCGAGCTTATATTATTAACTTTGTGATCTTATGCATTCTCGTGGCATCGACCGTTTCCGGGTACAACCAGAAAGACGTGAAAGCATGGTGCAGCCAAACTCCAAACCCTAAACCTTGCGAGTATTTCTTAACCCATAACTCAAACAATGAACCCATAAAGTCTGAATCCGAGTTTCTCAAAATCTCAATGAAACTCGTATTAGACCGAGCCATCCTCGCCAAAACCCACGCGTTCACACTAGGACCAAAGTGCCGTGACACACGTGAAAAAGCAGCGTGGGAAGATTGTATCAAGCTCTACGACCTCACCGTCTCTAAAATCAACGAGACAATGGACCCAAACGTGAAGTGCTCAAAACTCGACGCGCAAACATGGCTAAGCACGGCTCTAACCAATCTTGACACATGTCGAGCTGGGTTCTTAGAGCTTGGTGTTACCGATATTGTCCTTCCTTTGATGTCAAACAACGTCTCGAATCTTCTATGCAACACACTCGCCATTAACAAAGTTCCTTTCAACTACACCCCACCCGAGAAAGACGGGTTCCCTTCGTGGGTCAAACCTGGTGACCGGAAACTTTTGCAAAGCTCGACGCCAAAAGATAACGCAGTGGTGGCGAAAGACGGATCTGGCAATTTTAAGACGATAAAAGAAGCGATTGATGCTGCTTCGGGGAGTGGTAGGTTCGTTATATATGTGAAGCAAGGCGTTTACAGTGAGAACCTTGAGATTCGGAAAAAGAATGTCATGTTGAGAGGTGATGGTATAGGGAAGACGATTATTACCGGAAGCAAAAGTGTTGGAGGAGGAACGACAACCTTTAACTCAGCTACTGTCGCGGCGGTCGGAGACGGGTTTATAGCTCGTGGGATCACGTTTCGAAACACGGCGGGTGCAAGCAACGAACAAGCGGTAGCTCTAAGATCCGGGTCGGATCTGTCAGTTTTTTACCAATGCAGTTTCGAAGCTTACCAAGACACACTCTACGTTCACTCCAACCGTCAGTTTTACCGCGATTGCGACGTTTATGGAACTGTCGATTTTATCTTCGGAAACGCAGCCGCGGTTCTCCAGAACTGCAACATTTTCGCACGTCGTCCTCGTAGTAAGACCAACACAATCACAGCTCAAGGAAGATCCGACCCGAATCAAAACACGGGGATTATTATCCACAACTCTCGGGTCACGGCCGCTTCGGATCTTCGACCCGTTTTGGGATCCACAAAGACTTATTTGGGTAGACCTTGGAGACAATATTCTAGGACGGTTTTTATGAAGACTTCTCTTGATAGTTTGATTGATCCACGTGGCTGGCTCGAGTGGGATGGTAATTTCGCTTTGAAGACTTTGTTCTATGCTGAGTTTCAAAATACGGGTCCGGGTGCTTCAACTTCGGGTCGGGTCACATGGCCAGGGTTTCGGGTCCTTGGTTCTGCTTCAGAGGCTTCCAAGTTTACTGTTGGTACTTTCCTCGCCGGTGGCTCTTGGATTCCATCTAGCGTGCCGTTCACTTCTGGTCTCTAGTGAATATATGGTATGATGCAAAGTTGTATATACAACGCAATTGATTCGTCTATTACAAAGAATAAATATTGTTTGTTACATTATAGAAACTATTGTATAATTTTATGTATTACAATCATTTATGCAATTTCATTTTTCTGTAAAGATATTGTATTCTTTCTCATCTGAAATATAATGTCATATGATCGATGATTCTATTAGGTTTGTTTTTTTAACTCTA
CDS Sequence
- >AT2G45220.1
ATGATGGCTTTTCGAGCTTATATTATTAACTTTGTGATCTTATGCATTCTCGTGGCATCGACCGTTTCCGGGTACAACCAGAAAGACGTGAAAGCATGGTGCAGCCAAACTCCAAACCCTAAACCTTGCGAGTATTTCTTAACCCATAACTCAAACAATGAACCCATAAAGTCTGAATCCGAGTTTCTCAAAATCTCAATGAAACTCGTATTAGACCGAGCCATCCTCGCCAAAACCCACGCGTTCACACTAGGACCAAAGTGCCGTGACACACGTGAAAAAGCAGCGTGGGAAGATTGTATCAAGCTCTACGACCTCACCGTCTCTAAAATCAACGAGACAATGGACCCAAACGTGAAGTGCTCAAAACTCGACGCGCAAACATGGCTAAGCACGGCTCTAACCAATCTTGACACATGTCGAGCTGGGTTCTTAGAGCTTGGTGTTACCGATATTGTCCTTCCTTTGATGTCAAACAACGTCTCGAATCTTCTATGCAACACACTCGCCATTAACAAAGTTCCTTTCAACTACACCCCACCCGAGAAAGACGGGTTCCCTTCGTGGGTCAAACCTGGTGACCGGAAACTTTTGCAAAGCTCGACGCCAAAAGATAACGCAGTGGTGGCGAAAGACGGATCTGGCAATTTTAAGACGATAAAAGAAGCGATTGATGCTGCTTCGGGGAGTGGTAGGTTCGTTATATATGTGAAGCAAGGCGTTTACAGTGAGAACCTTGAGATTCGGAAAAAGAATGTCATGTTGAGAGGTGATGGTATAGGGAAGACGATTATTACCGGAAGCAAAAGTGTTGGAGGAGGAACGACAACCTTTAACTCAGCTACTGTCGCGGCGGTCGGAGACGGGTTTATAGCTCGTGGGATCACGTTTCGAAACACGGCGGGTGCAAGCAACGAACAAGCGGTAGCTCTAAGATCCGGGTCGGATCTGTCAGTTTTTTACCAATGCAGTTTCGAAGCTTACCAAGACACACTCTACGTTCACTCCAACCGTCAGTTTTACCGCGATTGCGACGTTTATGGAACTGTCGATTTTATCTTCGGAAACGCAGCCGCGGTTCTCCAGAACTGCAACATTTTCGCACGTCGTCCTCGTAGTAAGACCAACACAATCACAGCTCAAGGAAGATCCGACCCGAATCAAAACACGGGGATTATTATCCACAACTCTCGGGTCACGGCCGCTTCGGATCTTCGACCCGTTTTGGGATCCACAAAGACTTATTTGGGTAGACCTTGGAGACAATATTCTAGGACGGTTTTTATGAAGACTTCTCTTGATAGTTTGATTGATCCACGTGGCTGGCTCGAGTGGGATGGTAATTTCGCTTTGAAGACTTTGTTCTATGCTGAGTTTCAAAATACGGGTCCGGGTGCTTCAACTTCGGGTCGGGTCACATGGCCAGGGTTTCGGGTCCTTGGTTCTGCTTCAGAGGCTTCCAAGTTTACTGTTGGTACTTTCCTCGCCGGTGGCTCTTGGATTCCATCTAGCGTGCCGTTCACTTCTGGTCTCTAG
Protein Sequence
- >AT2G45220.1
MMAFRAYIINFVILCILVASTVSGYNQKDVKAWCSQTPNPKPCEYFLTHNSNNEPIKSESEFLKISMKLVLDRAILAKTHAFTLGPKCRDTREKAAWEDCIKLYDLTVSKINETMDPNVKCSKLDAQTWLSTALTNLDTCRAGFLELGVTDIVLPLMSNNVSNLLCNTLAINKVPFNYTPPEKDGFPSWVKPGDRKLLQSSTPKDNAVVAKDGSGNFKTIKEAIDAASGSGRFVIYVKQGVYSENLEIRKKNVMLRGDGIGKTIITGSKSVGGGTTTFNSATVAAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPRSKTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSSVPFTSGL