Gene Details:
- Gene ID: AT2G45140
- Gene Symbol: PVA12
- Gene Name: plant VAP homolog 12
- Description: plant VAP homolog 12;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature:
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The targeting of the oxysterol-binding protein ORP3a to the endoplasmic reticulum relies on the plant VAP33 homolog PVA12. DOI: 10.1111/j.1365-313X.2009.03815.x ; PMID: 19207211
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The DC1-domain protein VACUOLELESS GAMETOPHYTES is essential for development of female and male gametophytes in Arabidopsis. DOI: 10.1111/tpj.13486 ; PMID: 28107777
- TraB family proteins are components of ER-mitochondrial contact sites and regulate ER-mitochondrial interactions and mitophagy. DOI: 10.1038/s41467-022-33402-w ; PMID: 36163196
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
Sequences:
cDNA Sequence
- >AT2G45140.2
AATAACAAGAAGTGAGTCTCCGGTCTGAAACTAATTAAGGAGACGGCAAGAGAAACAAGACATACGTTTGCTGTCCCACGTTGATCTTGTTGTTTACTCTCTCTCTCTCCTCCATCGGCGACGACCACCGGAGATCAGCGTCACCGTACCAAAACATCATTTACCTTCTTTTAGATTTGTTGTTTTTTAATCAGTTGAATCGGAATAAAATATCGCATCAGAGATGAGTAACGAGCTTCTCACCATCGATCCTGTCGACCTTCAATTCCCTTTTGAATTGAAGAAGCAGATCTCTTGTTCTCTCTATTTGGGTAACAAGACCGATAATTATGTCGCCTTCAAGGTTAAGACGACGAATCCAAAGAAGTACTGCGTTAGGCCTAATACTGGTGTTGTTCATCCCAGATCCTCTTCTGAAGTTTTAGTGACCATGCAAGCTCAAAAGGAAGCTCCTGCTGATCTGCAGTGTAAAGATAAGTTCTTGCTTCAATGTGTAGTCGCTAGTCCCGGAGCCACCCCCAAGGATGTTACACATGAGATGTTTAGCAAAGAGGCAGGGCATCGAGTTGAAGAGACTAAATTGAGAGTTGTCTATGTTGCTCCACCACGACCACCATCACCGGTTCGAGAAGGATCTGAAGAGGGCTCTTCACCGAGGGCTTCTGTCTCTGATAATGGGAATGCTTCTGATTTTACTGCTGCAAGAGCTCTGGTCACAAAACTCACCGAGGAAAAGAACTCTGCGGTTCAACTGAACAACAGGCTTCAACAAGAATTGGACCAGTTGAGGCGCGAAAGCAAGAGAAGTAAGAGTGGTGGAATCCCTTTCATGTACGTTCTTCTGGTCGGCCTAATCGGTTTAATCCTGGGATACATTATGAAGAGGACATGATCAGATCCCTTCAACAAAATACTCCAAAAGTCTCAAAGTGCTTAAAAAAGCATTGAAAAGGAAAGAAATCAAATTGTGTGAGGAGGACAATCTTCTCTTCTGCCTTATCGTCGTCATGCACCTTTGGTTAAAATCTGAACTTAGTGCGTTAGAGGATTTGTATTACGGTTTCCATAAGACTTAGAATTGTCACAAAATCTCCTTTTTCCTCTCTCTTATTACAACTTTGTGTAGTCTTAAACACTTTTGTTTCTTCGTCTTCTCTCATCTTAACTTTTTCTCTCCATCTCTCATAGAATAAAGGGATGAAACATGTCGCC - >AT2G45140.1
AATAACAAGAAGTGAGTCTCCGGTCTGAAACTAATTAAGGAGACGGCAAGAGAAACAAGACATACGTTTGCTGTCCCACGTTGATCTTGTTGTTTACTCTCTCTCTCTCCTCCATCGGCGACGACCACCGGAGATCAGCGTCACCGTACCAAAACATCATTTACCTTCTTTTAGATTTGTTGTTTTTTAATCAGTTGAATCGGAATAAAATATCGCATCAGAGATGAGTAACGAGCTTCTCACCATCGATCCTGTCGACCTTCAATTCCCTTTTGAATTGAAGAAGCAGATCTCTTGTTCTCTCTATTTGGGTAACAAGACCGATAATTATGTCGCCTTCAAGGTTAAGACGACGAATCCAAAGAAGTACTGCGTTAGGCCTAATACTGGTGTTGTTCATCCCAGATCCTCTTCTGAAGTTTTAGTGACCATGCAAGCTCAAAAGGAAGCTCCTGCTGATCTGCAGTGTAAAGATAAGTTCTTGCTTCAATGTGTAGTCGCTAGTCCCGGAGCCACCCCCAAGGATGTTACACATGAGATGTTTAGCAAAGAGGCAGGGCATCGAGTTGAAGAGACTAAATTGAGAGTTGTCTATGTTGCTCCACCACGACCACCATCACCGGTTCGAGAAGGATCTGAAGAGGGCTCTTCACCGAGGGCTTCTGTCTCTGATAATGGGAATGCTTCTGATTTTACTGCTGCAAGAGCTCTGGTCACAAAACTCACCGAGGAAAAGAACTCTGCGGTTCAACTGAACAACAGGCTTCAACAAGAATTGGACCAGTTGAGGCGCGAAAGCAAGAGAAGTAAGAGTGGTGGAATCCCTTTCATGTACGTTCTTCTGGTCGGCCTAATCGGTTTAATCCTGGGATACATTATGAAGAGGACATGATCAGATCCCTTCAACAAAATACTCCAAAAGTCTCAAAGTGCTTAAAAAAGCATTGAAAAGGAAAGAAATCAAATTGTGTGAGGAGGACAATCTTCTCTTCTGCCTTATCGTCGTCATGCACCTTTGGTTAAAATCTGAACTTAGTGCGTTAGAGGATTTGTATTACGGTTTCCATAAGACTTAGAATTGTCACAAAATCTCCTTTTTCCTCTCTCTTATTACAACTTTGTGTAGTCTTAAACACTTTTGTTTCTTCGTCTTCTCTCATCTTAACTTTTTCTCTCCATCTCTCATAGAATAAAGGGATGAAACATGTCGCC
CDS Sequence
- >AT2G45140.2
ATGAGTAACGAGCTTCTCACCATCGATCCTGTCGACCTTCAATTCCCTTTTGAATTGAAGAAGCAGATCTCTTGTTCTCTCTATTTGGGTAACAAGACCGATAATTATGTCGCCTTCAAGGTTAAGACGACGAATCCAAAGAAGTACTGCGTTAGGCCTAATACTGGTGTTGTTCATCCCAGATCCTCTTCTGAAGTTTTAGTGACCATGCAAGCTCAAAAGGAAGCTCCTGCTGATCTGCAGTGTAAAGATAAGTTCTTGCTTCAATGTGTAGTCGCTAGTCCCGGAGCCACCCCCAAGGATGTTACACATGAGATGTTTAGCAAAGAGGCAGGGCATCGAGTTGAAGAGACTAAATTGAGAGTTGTCTATGTTGCTCCACCACGACCACCATCACCGGTTCGAGAAGGATCTGAAGAGGGCTCTTCACCGAGGGCTTCTGTCTCTGATAATGGGAATGCTTCTGATTTTACTGCTGCAAGAGCTCTGGTCACAAAACTCACCGAGGAAAAGAACTCTGCGGTTCAACTGAACAACAGGCTTCAACAAGAATTGGACCAGTTGAGGCGCGAAAGCAAGAGAAGTAAGAGTGGTGGAATCCCTTTCATGTACGTTCTTCTGGTCGGCCTAATCGGTTTAATCCTGGGATACATTATGAAGAGGACATGA - >AT2G45140.1
ATGAGTAACGAGCTTCTCACCATCGATCCTGTCGACCTTCAATTCCCTTTTGAATTGAAGAAGCAGATCTCTTGTTCTCTCTATTTGGGTAACAAGACCGATAATTATGTCGCCTTCAAGGTTAAGACGACGAATCCAAAGAAGTACTGCGTTAGGCCTAATACTGGTGTTGTTCATCCCAGATCCTCTTCTGAAGTTTTAGTGACCATGCAAGCTCAAAAGGAAGCTCCTGCTGATCTGCAGTGTAAAGATAAGTTCTTGCTTCAATGTGTAGTCGCTAGTCCCGGAGCCACCCCCAAGGATGTTACACATGAGATGTTTAGCAAAGAGGCAGGGCATCGAGTTGAAGAGACTAAATTGAGAGTTGTCTATGTTGCTCCACCACGACCACCATCACCGGTTCGAGAAGGATCTGAAGAGGGCTCTTCACCGAGGGCTTCTGTCTCTGATAATGGGAATGCTTCTGATTTTACTGCTGCAAGAGCTCTGGTCACAAAACTCACCGAGGAAAAGAACTCTGCGGTTCAACTGAACAACAGGCTTCAACAAGAATTGGACCAGTTGAGGCGCGAAAGCAAGAGAAGTAAGAGTGGTGGAATCCCTTTCATGTACGTTCTTCTGGTCGGCCTAATCGGTTTAATCCTGGGATACATTATGAAGAGGACATGA
Protein Sequence
- >AT2G45140.2
MSNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRSSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRVVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAARALVTKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT - >AT2G45140.1
MSNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRSSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRVVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAARALVTKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT