Gene Details:
- Gene ID: AT2G45070
- Gene Symbol: SEC61 BETA
- Gene Name: SUPPRESSORS OF SECRETION-DEFECTIVE 61 BETA
- Description: Preprotein translocase Sec, Sec61-beta subunit protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , plant sperm cell , pollen tube cell , pollen
Literature:
- Yeast protein translocation complex: isolation of two genes SEB1 and SEB2 encoding proteins homologous to the Sec61 beta subunit. DOI: 10.1002/(SICI)1097-0061(199604)12:5%3C425::AID-YEA924%3E3.0.CO;2-B ; PMID: 8740416
- Genomic analysis of the unfolded protein response in Arabidopsis shows its connection to important cellular processes. DOI: 10.1105/tpc.007609 ; PMID: 12566592
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- 2in1 Vectors Improve In Planta BiFC and FRET Analyses. DOI: 10.1007/978-1-4939-7389-7_11 ; PMID: 29043675
- Yeast protein translocation complex: isolation of two genes SEB1 and SEB2 encoding proteins homologous to the Sec61 beta subunit. DOI: 10.1002/(SICI)1097-0061(199604)12:5%3C425::AID-YEA924%3E3.0.CO;2-B ; PMID: 8740416
Sequences:
cDNA Sequence
- >AT2G45070.3
ATACATTTTAATTTGGGCTTCTTCTGGGCCTTAATATTTGGGCTTTAAATAAGTTATCTCTCCCACTTACGCATGTAAACACAGCTCTGATAATTACGCTGAGGTGGCATTTTTTAATTGGCTAATGCATTAAGAGATGCGTGGCGAGAAATTTCCCCTCCTATAAAAATTGTTGAAGAGTCCGGTCAACTCCGAAAGTCTTCAAATCTCTCCGTCACGAATCGTTCTCTCGTCGTCATCAAAATCTGTTAGCCGAATCAGGCCAACCATTATTCTCAGATAGAGAAAAGAAGAAAGAATGGTGGGAAGTGGAGCTCCACAGAGAGGAAGTGCAGCTGCAACTGCAAGCATGCGTAGGAGGAAGCCGACCAGCGGTGCTGGTGGAGGAGGTGCCTCTGGTGGTGCAGCCGGATCCATGCTTCAGTTCTACACCGATGACGCACCTGGTCTCAAGATCTCCCCCAATGTTGTTCTTATCATGAGCATCGGTTTCATTGCTTTCGTCGCTGTGCTTCATGTTATGGGCAAGCTCTACTTTGTCAAATGATGACAAAGATAATAGTTGAAGACAATGCCACCCTAAGTGACTGCTAGTGATCCAAATATTATACAGTGGTTTCAAGTTAATGTTTTAATTTTGTGGTTTATTACCAGAGTATAAACGATCTTTCACAATTCCAGTTTCTTTACATTCAAATTTTCAATATTCTTCACACATATTATAGGCATGAGCTTTTTATACATCTCACAAATGACAATGAGTACTATTATCACCTTTTTA - >AT2G45070.2
ATACATTTTAATTTGGGCTTCTTCTGGGCCTTAATATTTGGGCTTTAAATAAGTTATCTCTCCCACTTACGCATGTAAACACAGCTCTGATAATTACGCTGAGGTGGCATTTTTTAATTGGCTAATGCATTAAGAGATGCGTGGCGAGAAATTTCCCCTCCTATAAAAATTGTTGAAGAGTCCGGTCAACTCCGAAAGTCTTCAAATCTCTCCGTCACGAATCGTTCTCTCGTCGTCATCAAAATCTGTTAGCCGAATCAGGCCAACCATTATTCTCAGATAGAGAAAAGAAGAAAGAATGGTGGGAAGTGGAGCTCCACAGAGAGGAAGTGCAGCTGCAACTGCAAGCATGCGTAGGAGGAAGCCGACCAGCGGTGCTGGTGGAGGAGGTGCCTCTGGTGGTGCAGCCGGATCCATGCTTCAGTTCTACACCGATGACGCACCTGGTCTCAAGATCTCCCCCAATGTTGTTCTTATCATGAGCATCGGTTTCATTGCTTTCGTCGCTGTGCTTCATGTTATGGGCAAGCTCTACTTTGTCAAATGATGACAAAGATAATAGTTGAAGACAATGCCACCCTAAGTGACTGCTAGTGATCCAAATATTATACAGTGGTTTCAAGTTAATGTTTTAATTTTGTGGTTTATTACCAGAGTATAAACGATCTTTCACAATTCCAGTTTCTTTACATTCAAATTTTCAATATTCTTCACACATATTATAGGCATGAGCTTTTTATACATCTCACAAATGACAATGAGTACTATTATCACCTTTTTA - >AT2G45070.4
ATACATTTTAATTTGGGCTTCTTCTGGGCCTTAATATTTGGGCTTTAAATAAGTTATCTCTCCCACTTACGCATGTAAACACAGCTCTGATAATTACGCTGAGGTGGCATTTTTTAATTGGCTAATGCATTAAGAGATGCGTGGCGAGAAATTTCCCCTCCTATAAAAATTGTTGAAGAGTCCGGTCAACTCCGAAAGTCTTCAAATCTCTCCGTCACGAATCGTTCTCTCGTCGTCATCAAAATCTGTTAGCCGAATCAGGCCAACCATTATTCTCAGATAGAGAAAAGAAGAAAGAATGGTGGGAAGTGGAGCTCCACAGAGAGGAAGTGCAGCTGCAACTGCAAGCATGCGTAGGAGGAAGCCGACCAGCGGTGCTGGTGGAGGAGGTGCCTCTGGTGGTGCAGCCGGATCCATGCTTCAGTTCTACACCGATGACGCACCTGGTCTCAAGATCTCCCCCAATGTTGTTCTTATCATGAGCATCGGTTTCATTGCTTTCGTCGCTGTGCTTCATGTTATGGGCAAGCTCTACTTTGTCAAATGATGACAAAGATAATAGTTGAAGACAATGCCACCCTAAGTGACTGCTAGTGATCCAAATATTATACAGTGGTTTCAAGTTAATGTTTTAATTTTGTGGTTTATTACCAGAGTATAAACGATCTTTCACAATTCCAGTTTCTTTACATTCAAATTTTCAATATTCTTCACACATATTATAGGCATGAGCTTTTTATACATCTCACAAATGACAATGAGTACTATTATCACCTTTTTA - >AT2G45070.1
ATACATTTTAATTTGGGCTTCTTCTGGGCCTTAATATTTGGGCTTTAAATAAGTTATCTCTCCCACTTACGCATGTAAACACAGCTCTGATAATTACGCTGAGGTGGCATTTTTTAATTGGCTAATGCATTAAGAGATGCGTGGCGAGAAATTTCCCCTCCTATAAAAATTGTTGAAGAGTCCGGTCAACTCCGAAAGTCTTCAAATCTCTCCGTCACGAATCGTTCTCTCGTCGTCATCAAAATCTGTTAGCCGAATCAGGCCAACCATTATTCTCAGATAGAGAAAAGAAGAAAGAATGGTGGGAAGTGGAGCTCCACAGAGAGGAAGTGCAGCTGCAACTGCAAGCATGCGTAGGAGGAAGCCGACCAGCGGTGCTGGTGGAGGAGGTGCCTCTGGTGGTGCAGCCGGATCCATGCTTCAGTTCTACACCGATGACGCACCTGGTCTCAAGATCTCCCCCAATGTTGTTCTTATCATGAGCATCGGTTTCATTGCTTTCGTCGCTGTGCTTCATGTTATGGGCAAGCTCTACTTTGTCAAATGATGACAAAGATAATAGTTGAAGACAATGCCACCCTAAGTGACTGCTAGTGATCCAAATATTATACAGTGGTTTCAAGTTAATGTTTTAATTTTGTGGTTTATTACCAGAGTATAAACGATCTTTCACAATTCCAGTTTCTTTACATTCAAATTTTCAATATTCTTCACACATATTATAGGCATGAGCTTTTTATACATCTCACAAATGACAATGAGTACTATTATCACCTTTTTA
CDS Sequence
- >AT2G45070.3
ATGGTGGGAAGTGGAGCTCCACAGAGAGGAAGTGCAGCTGCAACTGCAAGCATGCGTAGGAGGAAGCCGACCAGCGGTGCTGGTGGAGGAGGTGCCTCTGGTGGTGCAGCCGGATCCATGCTTCAGTTCTACACCGATGACGCACCTGGTCTCAAGATCTCCCCCAATGTTGTTCTTATCATGAGCATCGGTTTCATTGCTTTCGTCGCTGTGCTTCATGTTATGGGCAAGCTCTACTTTGTCAAATGA - >AT2G45070.2
ATGGTGGGAAGTGGAGCTCCACAGAGAGGAAGTGCAGCTGCAACTGCAAGCATGCGTAGGAGGAAGCCGACCAGCGGTGCTGGTGGAGGAGGTGCCTCTGGTGGTGCAGCCGGATCCATGCTTCAGTTCTACACCGATGACGCACCTGGTCTCAAGATCTCCCCCAATGTTGTTCTTATCATGAGCATCGGTTTCATTGCTTTCGTCGCTGTGCTTCATGTTATGGGCAAGCTCTACTTTGTCAAATGA - >AT2G45070.4
ATGGTGGGAAGTGGAGCTCCACAGAGAGGAAGTGCAGCTGCAACTGCAAGCATGCGTAGGAGGAAGCCGACCAGCGGTGCTGGTGGAGGAGGTGCCTCTGGTGGTGCAGCCGGATCCATGCTTCAGTTCTACACCGATGACGCACCTGGTCTCAAGATCTCCCCCAATGTTGTTCTTATCATGAGCATCGGTTTCATTGCTTTCGTCGCTGTGCTTCATGTTATGGGCAAGCTCTACTTTGTCAAATGA - >AT2G45070.1
ATGGTGGGAAGTGGAGCTCCACAGAGAGGAAGTGCAGCTGCAACTGCAAGCATGCGTAGGAGGAAGCCGACCAGCGGTGCTGGTGGAGGAGGTGCCTCTGGTGGTGCAGCCGGATCCATGCTTCAGTTCTACACCGATGACGCACCTGGTCTCAAGATCTCCCCCAATGTTGTTCTTATCATGAGCATCGGTTTCATTGCTTTCGTCGCTGTGCTTCATGTTATGGGCAAGCTCTACTTTGTCAAATGA
Protein Sequence
- >AT2G45070.3
MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK - >AT2G45070.2
MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK - >AT2G45070.4
MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK - >AT2G45070.1
MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK