Information report for AT2G45050
Gene Details
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Functional Descriptions
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. DOI: 10.1016/s0006-291x(02)02892-9 ; PMID: 12504119
- The GATA family of transcription factors in Arabidopsis and rice. DOI: 10.1104/pp.103.037788 ; PMID: 15084732
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Expression profiling of phyB mutant demonstrates substantial contribution of other phytochromes to red-light-regulated gene expression during seedling de-etiolation. DOI: 10.1111/j.1365-313X.2004.02084.x ; PMID: 15144375
- Arabidopsis Aux/IAA genes are involved in brassinosteroid-mediated growth responses in a manner dependent on organ type. DOI: 10.1111/j.1365-313X.2005.02582.x ; PMID: 16367964
- Conservation of noncoding microsatellites in plants: implication for gene regulation. DOI: 10.1186/1471-2164-7-323 ; PMID: 17187690
- Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family. DOI: 10.1104/pp.106.090761 ; PMID: 17208962
- and brassinosteroid-signaling pathways by a GATA transcription factor in Arabidopsis. DOI: 10.1016/j.devcel.2010.10.023 ; PMID: 21145502
- Longitudinal patterning in roots: a GATA2-auxin interaction underlies and maintains the root transition domain. DOI: 10.1007/s00425-017-2831-4 ; PMID: 29249045
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: B9DGF3
- EMBL: AB493590, AK317134
- AlphaFoldDB: B9DGF3
- EnsemblPlants: AT2G45050.1
- Gramene: AT2G45050.1
- KEGG: ath:AT2G45050
- Orthologous matrix: SEWEIAM
- ExpressionAtlas: AT2G45050
Homologs
- Brassica napus GSBRNA2T00006174001, GSBRNA2T00063226001, GSBRNA2T00116667001, GSBRNA2T00037347001
- Brassica oleracea XP_013634221.1, XP_013635109.1
- Brassica rapa XP_009143097.1, XP_009142314.1
- Raphanus raphanistrum RrC7_p6, RrC12158_p1
Sequences
cDNA Sequence
- >AT2G45050.1
GTTTTAACTCTCTTCTTCTTATAGATAAAAGTGGATGATAAATTAAAAAATAAATAAAGAAGAGAGAAGTGAATAAGGTCGAGTCGGTCACTCACGGTGCATGGTCACTCTCTCTGCACGTTCTCTTGCCCTCTCTCTCTCTCGTTATCTCCCCTATTAAAGACTCTAACCAGTCACACAGAGAGTGAGAAAGAGAGAGAGACAGAGTCAGAGTCTTCGTCTGCAAGAGAGAACAATACCACTCAATCATAATCTATAACAATGGACGTCTATGGCTTATCTTCACCAGACTTACTTCGAATCGACGACCTTCTTGATTTCTCCAACGAAGACATCTTCTCCGCTTCTTCTTCCGGTGGTTCCACCGCCGCTACTTCCTCTTCTTCTTTCCCTCCTCCTCAAAACCCTAGTTTCCACCACCACCATCTCCCTTCCTCCGCCGATCATCACTCCTTCCTCCACGACATTTGCGTTCCCAGTGATGACGCAGCTCATCTTGAATGGCTTTCGCAATTCGTGGACGATTCTTTCGCTGATTTTCCGGCGAATCCATTAGGAGGAACTATGACTTCTGTCAAAACTGAAACTTCCTTTCCGGGGAAACCAAGAAGCAAACGATCAAGAGCTCCTGCTCCTTTCGCCGGAACATGGTCTCCGATGCCACTGGAATCCGAGCATCAGCAGCTTCACTCCGCCGCCAAATTCAAGCCAAAGAAAGAACAATCCGGCGGAGGAGGAGGAGGAGGAGGAAGACATCAGTCATCGTCATCGGAGACTACGGAAGGAGGAGGAATGAGGAGATGTACTCACTGTGCATCGGAGAAAACGCCACAGTGGAGGACAGGACCACTTGGACCTAAAACACTATGTAACGCTTGTGGAGTCCGGTTTAAATCCGGTAGACTTGTACCGGAATATAGACCGGCTTCGAGTCCTACTTTTGTTTTGACTCAGCATTCAAACTCTCACCGGAAAGTGATGGAGCTTCGACGGCAGAAAGAAGTTATGAGACAACCACAACAAGTTCAACTTCATCACCACCACCACCCGTTTTAGTTTTCACTTTTCACTGCCTCGTCCGTCGTCACTCTTTTTTTTGTTTTTCTTTTTGGTTCTTGGGGTTGGGTTTTGGGTAACGTCACGTGATGATGACGTGTCGCGATCCTAGCGGCGTTAATCACGTGACCGACGACGACGGGAGCCTAAAATTTTTAGTGAACGTTGGAAAATCAAACCTCATTTAATTGTTAATTATTAAAAAAAAATTATATCTTTGGGCTTTGCCTTTTCTCCTACGTTATTTACTTCATCCTTCAATTTTGTTTTCTTTAAATATTT
CDS Sequence
- >AT2G45050.1
ATGGACGTCTATGGCTTATCTTCACCAGACTTACTTCGAATCGACGACCTTCTTGATTTCTCCAACGAAGACATCTTCTCCGCTTCTTCTTCCGGTGGTTCCACCGCCGCTACTTCCTCTTCTTCTTTCCCTCCTCCTCAAAACCCTAGTTTCCACCACCACCATCTCCCTTCCTCCGCCGATCATCACTCCTTCCTCCACGACATTTGCGTTCCCAGTGATGACGCAGCTCATCTTGAATGGCTTTCGCAATTCGTGGACGATTCTTTCGCTGATTTTCCGGCGAATCCATTAGGAGGAACTATGACTTCTGTCAAAACTGAAACTTCCTTTCCGGGGAAACCAAGAAGCAAACGATCAAGAGCTCCTGCTCCTTTCGCCGGAACATGGTCTCCGATGCCACTGGAATCCGAGCATCAGCAGCTTCACTCCGCCGCCAAATTCAAGCCAAAGAAAGAACAATCCGGCGGAGGAGGAGGAGGAGGAGGAAGACATCAGTCATCGTCATCGGAGACTACGGAAGGAGGAGGAATGAGGAGATGTACTCACTGTGCATCGGAGAAAACGCCACAGTGGAGGACAGGACCACTTGGACCTAAAACACTATGTAACGCTTGTGGAGTCCGGTTTAAATCCGGTAGACTTGTACCGGAATATAGACCGGCTTCGAGTCCTACTTTTGTTTTGACTCAGCATTCAAACTCTCACCGGAAAGTGATGGAGCTTCGACGGCAGAAAGAAGTTATGAGACAACCACAACAAGTTCAACTTCATCACCACCACCACCCGTTTTAG
Protein Sequence
- >AT2G45050.1
MDVYGLSSPDLLRIDDLLDFSNEDIFSASSSGGSTAATSSSSFPPPQNPSFHHHHLPSSADHHSFLHDICVPSDDAAHLEWLSQFVDDSFADFPANPLGGTMTSVKTETSFPGKPRSKRSRAPAPFAGTWSPMPLESEHQQLHSAAKFKPKKEQSGGGGGGGGRHQSSSSETTEGGGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKEVMRQPQQVQLHHHHHPF