Information report for AT2G44940
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression profiling of cytokinin action in Arabidopsis. DOI: 10.1104/pp.103.021436 ; PMID: 12913156
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- Eukaryotic transcription factors in plastids–Bioinformatic assessment and implications for the evolution of gene expression machineries in plants. DOI: 10.1016/j.gene.2006.06.022 ; PMID: 16934950
- The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth. DOI: 10.1105/tpc.106.041319 ; PMID: 17329565
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- A stele-enriched gene regulatory network in the Arabidopsis root. DOI: 10.1038/msb.2010.114 ; PMID: 21245844
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Arabidopsis Group IIId ERF proteins positively regulate primary cell wall-type CESA genes. DOI: 10.1007/s10265-018-1074-1 ; PMID: 30478480
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- Ethylene responsive factor34 mediates stress-induced leaf senescence by regulating salt stress-responsive genes. DOI: 10.1111/pce.14317 ; PMID: 35312081
- An amiRNA screen uncovers redundant CBF and ERF34/35 transcription factors that differentially regulate arsenite and cadmium responses. DOI: 10.1111/pce.14023 ; PMID: 33554343
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Genome-wide analysis of the ERF gene family in Arabidopsis and rice. DOI: 10.1104/pp.105.073783 ; PMID: 16407444
Gene Resources
- UniProt: A0A654F781
- EMBL: CACRSJ010000105
- AlphaFoldDB: A0A654F781
- EnsemblPlants: AT2G44940.1
- Gramene: AT2G44940.1
- KEGG: ath:AT2G44940
- Orthologous matrix: EMMIRND
- ExpressionAtlas: AT2G44940
- InterPro: IPR001471, IPR016177, IPR036955
- PANTHER: PTHR31985, PTHR31985:SF130
- SUPFAM: SSF54171
- PROSITE: PS51032
- Gene3D: 3.30.730.10
- SWISS-MODEL: A0A654F781
- Conserved Domain Database: cd00018
Homologs
- Brassica napus GSBRNA2T00116657001, GSBRNA2T00006184001, GSBRNA2T00138984001, GSBRNA2T00101499001
- Brassica oleracea XP_013634052.1, XP_013626007.1, XP_013634433.1, XP_013626008.1
- Brassica rapa XP_009143083.1, XP_009133691.1, XP_009142308.1
- Raphanus raphanistrum RrC7_p13, RrC15917_p1, RrC5163_p2
Sequences
cDNA Sequence
- >AT2G44940.1
TTCCATATAATATGAAAAAGCCAAAGAAAAAAAAAAGATTGTGGAGGAATATTAATACAGCCCACTTCACATCTATTTTTGTGCAACCATCTCTCTAAAGCTTCTTCTCTCATAACAATGGCAAGACAAATCAACATAGAGAGTAGTGTTTCTCAAGTTACCTTTATCTCCTCCGCCATCCCCGCCGTATCTTCCTCCTCCTCCATCACCGCTTCCGCCTCATTGTCCTCTTCACCTACTACATCTTCCTCTTCTTCGTCATCAACAAATTCTAACTTCATTGAGGAAGACAACTCTAAAAGAAAAGCATCTCGAAGATCATTGTCATCGTTAGTCTCCGTTGAAGACGATGATGATCAAAACGGTGGAGGTGGGAAACGGCGAAAGACCAACGGTGGAGATAAACATCCGACGTATAGAGGAGTGAGGATGAGGAGTTGGGGAAAATGGGTGTCGGAGATTAGAGAGCCGAGAAAGAAATCAAGAATCTGGCTCGGGACTTATCCAACGGCTGAGATGGCAGCTCGAGCTCATGACGTAGCGGCTTTAGCCATTAAAGGTACAACGGCTTACCTCAATTTTCCCAAGTTAGCCGGCGAGCTTCCTCGTCCAGTCACAAATTCTCCTAAAGACATTCAAGCCGCCGCCTCTTTAGCGGCCGTTAACTGGCAAGATTCGGTCAACGATGTGAGTAATTCTGAAGTGGCTGAAATAGTTGAAGCCGAGCCGAGTCGAGCCGTGGTGGCTCAGTTGTTTTCTTCGGACACAAGCACGACGACGACGACTCAGAGTCAAGAGTATTCGGAAGCTTCGTGTGCTTCGACTTCGGCGTGTACGGACAAAGACAGTGAGGAAGAGAAGCTGTTTGATTTGCCGGATTTGTTTACCGATGAGAATGAGATGATGATACGAAACGATGCGTTTTGCTACTACTCGTCCACGTGGCAGCTTTGTGGAGCCGATGCTGGGTTTCGGCTTGAAGAGCCGTTTTTTCTATCTGAATGACTAAAGTACCCCTCTCGAGAGAGCTCTCACTAACACTTTATTAGTTTGCCATTTACTTCTTCTTCATTTTCTCTATTTACGTTTGATATTTTTTTTTCTTTCCAACTTGAGTGATATTGATTTTTTGTAAAGAAACAATTTCTTTTTTTTTTCCTAGCAAAATCGTGTTTGTGTAATATAAATGTGGTGATAACATGTTGAAATATTGCAGAATAATATAATGTAGCCTTACAAAAATCGTTTGAGAGTATTTTTTAGACCCTATTATTGTTAGAATTCAATATGATTTATTCACAAA
CDS Sequence
- >AT2G44940.1
ATGGCAAGACAAATCAACATAGAGAGTAGTGTTTCTCAAGTTACCTTTATCTCCTCCGCCATCCCCGCCGTATCTTCCTCCTCCTCCATCACCGCTTCCGCCTCATTGTCCTCTTCACCTACTACATCTTCCTCTTCTTCGTCATCAACAAATTCTAACTTCATTGAGGAAGACAACTCTAAAAGAAAAGCATCTCGAAGATCATTGTCATCGTTAGTCTCCGTTGAAGACGATGATGATCAAAACGGTGGAGGTGGGAAACGGCGAAAGACCAACGGTGGAGATAAACATCCGACGTATAGAGGAGTGAGGATGAGGAGTTGGGGAAAATGGGTGTCGGAGATTAGAGAGCCGAGAAAGAAATCAAGAATCTGGCTCGGGACTTATCCAACGGCTGAGATGGCAGCTCGAGCTCATGACGTAGCGGCTTTAGCCATTAAAGGTACAACGGCTTACCTCAATTTTCCCAAGTTAGCCGGCGAGCTTCCTCGTCCAGTCACAAATTCTCCTAAAGACATTCAAGCCGCCGCCTCTTTAGCGGCCGTTAACTGGCAAGATTCGGTCAACGATGTGAGTAATTCTGAAGTGGCTGAAATAGTTGAAGCCGAGCCGAGTCGAGCCGTGGTGGCTCAGTTGTTTTCTTCGGACACAAGCACGACGACGACGACTCAGAGTCAAGAGTATTCGGAAGCTTCGTGTGCTTCGACTTCGGCGTGTACGGACAAAGACAGTGAGGAAGAGAAGCTGTTTGATTTGCCGGATTTGTTTACCGATGAGAATGAGATGATGATACGAAACGATGCGTTTTGCTACTACTCGTCCACGTGGCAGCTTTGTGGAGCCGATGCTGGGTTTCGGCTTGAAGAGCCGTTTTTTCTATCTGAATGA
Protein Sequence
- >AT2G44940.1
MARQINIESSVSQVTFISSAIPAVSSSSSITASASLSSSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGADAGFRLEEPFFLSE