Information report for AT2G44840
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Identification of Arabidopsis ethylene-responsive element binding factors with distinct induction kinetics after pathogen infection. DOI: 10.1104/pp.010862 ; PMID: 11950980
- High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. DOI: 10.1111/j.1365-313X.2004.02281.x ; PMID: 15610358
- Genes involved in biosynthesis and signalisation of ethylene in Brassica oleracea and Arabidopsis thaliana: identification and genome comparative mapping of specific gene homologues. DOI: 10.1007/s00122-005-0136-7 ; PMID: 16311726
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves. DOI: 10.1104/pp.107.104828 ; PMID: 17873090
- Isolation and functional characterization of CE1 binding proteins. DOI: 10.1186/1471-2229-10-277 ; PMID: 21162722
- Visualization of wounding-induced root-to-shoot communication in Arabidopsis. DOI: 10.4161/psb.6.7.15602 ; PMID: 21617378
- Gene expression profiling through microarray analysis in Arabidopsis thaliana colonized by Pseudomonas putida MTCC5279, a plant growth promoting rhizobacterium. DOI: 10.4161/psb.18957 ; PMID: 22353860
- The EDLL motif: a potent plant transcriptional activation domain from AP2/ERF transcription factors. DOI: 10.1111/j.1365-313X.2012.04935.x ; PMID: 22321262
- Differential Contribution of Transcription Factors to Arabidopsis thaliana Defense Against Spodoptera littoralis. DOI: 10.3389/fpls.2013.00013 ; PMID: 23382734
- The AP2/EREBP gene PUCHI Co-Acts with LBD16/ASL18 and LBD18/ASL20 downstream of ARF7 and ARF19 to regulate lateral root development in Arabidopsis. DOI: 10.1093/pcp/pct081 ; PMID: 23749813
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Promoter-based integration in plant defense regulation. DOI: 10.1104/pp.114.248716 ; PMID: 25352272
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- and Autophosphorylation of Tyrosine Residues. DOI: 10.1074/jbc.M114.617274 ; PMID: 25969537
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Exogenous isoprene modulates gene expression in unstressed Arabidopsis thaliana plants. DOI: 10.1111/pce.12660 ; PMID: 26477606
- Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors. DOI: 10.1016/j.devcel.2016.09.031 ; PMID: 27923776
- Extracellular ATP Shapes a Defense-Related Transcriptome Both Independently and along with Other Defense Signaling Pathways. DOI: 10.1104/pp.18.01301 ; PMID: 30630869
- Class I TCP transcription factors regulate trichome branching and cuticle development in Arabidopsis. DOI: 10.1093/jxb/eraa257 ; PMID: 32453824
- Tyrosine Kinase-Dependent Defense Responses Against Herbivory in Arabidopsis. DOI: 10.3389/fpls.2019.00776 ; PMID: 31249583
- Ethylene Response Factor109 Attunes Immunity, Photosynthesis, and Iron Homeostasis in Arabidopsis Leaves. DOI: 10.3389/fpls.2022.841366 ; PMID: 35310669
- ROOT MERISTEM GROWTH FACTOR1 (RGF1)-RGF1 INSENSITIVE 1 peptide-receptor pair inhibits lateral root development via the MPK6-PUCHI module in Arabidopsis. DOI: 10.1093/jxb/erac495 ; PMID: 36516421
- Metal-responsive elements confer cadmium response in Arabidopsis. DOI: 10.1007/s00425-023-04093-4 ; PMID: 36773095
- Cytoplasmic Kinase Network Mediates Defense Response to Spodoptera litura in Arabidopsis. DOI: 10.3390/plants12091747 ; PMID: 37176805
- The AP2/EREBP family of plant transcription factors. DOI: 10.1515/bchm.1998.379.6.633 ; PMID: 9687012
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genome-wide analysis of the ERF gene family in Arabidopsis and rice. DOI: 10.1104/pp.105.073783 ; PMID: 16407444
- Molecular evolution of the AP2 subfamily. DOI: 10.1016/j.gene.2005.08.009 ; PMID: 16388920
- WRI1 is required for seed germination and seedling establishment. DOI: 10.1104/pp.106.079574 ; PMID: 16632590
- [Study of hrpN(CSDS001) and the gene expression profile of Arabidopsis thaliana induced by Harpin(CSDS001)]. DOI: 10.1360/yc-007-0629 ; PMID: 17548335
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Induction of a small heat shock protein and its functional roles in Nicotiana plants in the defense response against Ralstonia solanacearum. DOI: 10.1104/pp.107.105353 ; PMID: 17965181
- TINY, a dehydration-responsive element (DRE)-binding protein-like transcription and ethylene-responsive element-mediated signaling pathways in Arabidopsis. DOI: 10.1074/jbc.M706800200 ; PMID: 18089556
- Transcriptomic responses to aluminum stress in roots of Arabidopsis thaliana. DOI: 10.1007/s00438-007-0316-z ; PMID: 18270741
Gene Resources
Homologs
- Brassica napus GSBRNA2T00045201001, GSBRNA2T00116649001, GSBRNA2T00019621001, GSBRNA2T00022077001
- Brassica oleracea XP_013636620.1, XP_013634474.1
- Brassica rapa XP_009144089.1, XP_009142287.1
- Gossypium hirsutum Gh_D12G0959
- Raphanus raphanistrum RrC7413_p2
Sequences
cDNA Sequence
- >AT2G44840.1
AAAAAGAAGAAAACGAATCTTCTAAGAACGTAACAACTATCATCAAATCAAAACCTCAAAGAACCTTCCATGGACTTTCTCTCATTCCATACCTTTATAAACTCATACACAACTACTTATCTCTTCACTTCATTAGTCTCCAAGAAGAAAACATCTCTCACTCTCTAAAATACACACTCTCATCAAAAACCTTCTCTTCGGTTCAGAAGCATTCAAGAATCCATTATGAGCTCATCTGATTCCGTTAATAACGGCGTTAACTCACGGATGTACTTCCGTAACCCGAGTTTCAGCAACGTTATCTTAAACGATAACTGGAGCGACTTGCCGTTAAGTGTCGACGATTCTCAAGACATGGCTATTTACAACACTCTCCGTGATGCCGTTAGCTCCGGCTGGACACCCTCCGTTCCTCCCGTTACCTCTCCGGCGGAGGAAAATAAGCCTCCGGCGACGAAGGCGAGTGGCTCACACGCGCCGAGGCAGAAGGGGATGCAGTACAGAGGAGTGAGGAGGAGGCCGTGGGGGAAATTCGCGGCGGAGATTAGGGATCCGAAGAAGAACGGAGCTAGGGTTTGGCTCGGGACTTACGAGACGCCGGAGGACGCGGCGGTGGCGTACGACCGAGCGGCGTTTCAGCTCAGAGGATCGAAAGCTAAGCTGAATTTTCCGCATTTGATTGGTTCTTGTAAGTATGAGCCGGTTAGGATTAGGCCTCGCCGTCGCTCGCCGGAACCGTCAGTCTCCGATCAGTTAACGTCGGAGCAGAAGAGGGAAAGCCACGTGGATGACGGCGAGTCTAGTTTGGTTGTACCGGAGTTGGATTTCACGGTGGATCAGTTTTACTTCGATGGTAGTTTATTAATGGACCAATCAGAATGTTCTTATTCTGATAATCGGATATAATTAGTTTTAAGATTAAGCAAAATTTGTCCAACGAGTTTTGCTGTATGAAATATCTATCGATGACTCAACAGGTTTTGATCATGATCATATGTAATGTGATGGAAATTAAATATTGACGTTTGTTTTTTTCTTCTAAATTCGGTTCCATAGTAAAACTTCTATAATAATCTATTTTCTTATATAACTAGGAAAAAAAAGATTTCAAAT
CDS Sequence
- >AT2G44840.1
ATGAGCTCATCTGATTCCGTTAATAACGGCGTTAACTCACGGATGTACTTCCGTAACCCGAGTTTCAGCAACGTTATCTTAAACGATAACTGGAGCGACTTGCCGTTAAGTGTCGACGATTCTCAAGACATGGCTATTTACAACACTCTCCGTGATGCCGTTAGCTCCGGCTGGACACCCTCCGTTCCTCCCGTTACCTCTCCGGCGGAGGAAAATAAGCCTCCGGCGACGAAGGCGAGTGGCTCACACGCGCCGAGGCAGAAGGGGATGCAGTACAGAGGAGTGAGGAGGAGGCCGTGGGGGAAATTCGCGGCGGAGATTAGGGATCCGAAGAAGAACGGAGCTAGGGTTTGGCTCGGGACTTACGAGACGCCGGAGGACGCGGCGGTGGCGTACGACCGAGCGGCGTTTCAGCTCAGAGGATCGAAAGCTAAGCTGAATTTTCCGCATTTGATTGGTTCTTGTAAGTATGAGCCGGTTAGGATTAGGCCTCGCCGTCGCTCGCCGGAACCGTCAGTCTCCGATCAGTTAACGTCGGAGCAGAAGAGGGAAAGCCACGTGGATGACGGCGAGTCTAGTTTGGTTGTACCGGAGTTGGATTTCACGGTGGATCAGTTTTACTTCGATGGTAGTTTATTAATGGACCAATCAGAATGTTCTTATTCTGATAATCGGATATAA
Protein Sequence
- >AT2G44840.1
MSSSDSVNNGVNSRMYFRNPSFSNVILNDNWSDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPVRIRPRRRSPEPSVSDQLTSEQKRESHVDDGESSLVVPELDFTVDQFYFDGSLLMDQSECSYSDNRI