Gene Details:
- Gene ID: AT2G44650
- Gene Symbol: CHL-CPN10, CPN10
- Gene Name: chloroplast chaperonin 10, CHLOROPLAST CHAPERONIN 10
- Description: chloroplast chaperonin 10;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Chloroplasts have a novel Cpn10 in addition to Cpn20 as co-chaperonins in Arabidopsis thaliana. DOI: 10.1074/jbc.M102330200 ; PMID: 11402030
- Functional characterization of the higher plant chloroplast chaperonins. DOI: 10.1074/jbc.270.30.18158 ; PMID: 7629128
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Intron retention is a major phenomenon in alternative splicing in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02172.x ; PMID: 15341630
- Natural genetic variation in whole-genome expression in Arabidopsis thaliana: the impact of physiological QTL introgression. DOI: 10.1111/j.1365-294X.2006.02774.x ; PMID: 16626458
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Cpn20: siamese twins of the chaperonin world. DOI: 10.1007/s11103-008-9432-3 ; PMID: 19031045
- Significance of the N-terminal domain for the function of chloroplast cpn20 chaperonin. DOI: 10.1074/jbc.M606433200 ; PMID: 17178727
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Differential effects of co-chaperonin homologs on cpn60 oligomers. DOI: 10.1007/s12192-009-0104-2 ; PMID: 19224397
- Chloroplast β chaperonins from A. thaliana function with endogenous cpn10 homologs in vitro. DOI: 10.1007/s11103-011-9797-6 ; PMID: 21633907
- Chaperonin cofactors, Cpn10 and Cpn20, of green algae and plants function as hetero-oligomeric ring complexes. DOI: 10.1074/jbc.M112.365411 ; PMID: 22518837
- Cochaperonin CPN20 negatively regulates abscisic acid signaling in Arabidopsis. DOI: 10.1007/s11103-013-0082-8 ; PMID: 23783410
- Plant RuBisCo assembly in E. coli with five chloroplast chaperones including BSD2. DOI: 10.1126/science.aap9221 ; PMID: 29217567
- Cpn60β4 protein regulates growth and developmental cycling and has bearing on flowering time in Arabidopsis thaliana plants. DOI: 10.1016/j.plantsci.2019.05.022 ; PMID: 31300145
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequences:
cDNA Sequence
- >AT2G44650.1
TTGCATTCCGTGGTAATGTGGCTCGGCTTTGCAGCTCAATACACAGATTATAAGGCGCAGAAGAAGGAGACTAGTGAAATCAAGAGCAAGTTTAGGATTGGATGTTTTGAGAAGAGCTATCTAATGGGTTTGATTATAGTAGAGATAGTGTCTCAATTCTTGCATCCGTATTTTCTAGGTGATAAGTTGCCATTTTTGCCTTTAATGTTGATCTCAACATATTGTACCGTTGGTATTATGTACTCTTGGATTTGGCAGCTCCGGAAGATCCTGACATGACATATAGATAGATTCATGTAATAGTTAACTTGATTTTAGTACTACGTGAGTTTTTCCCTCCGTAGTATATGACTTTTCAGTATACCCCACGATACTGCATTACTGCTTCGGTGACTCTCAATAAAGTGCAATTGAGATTTCTCGGTTCAATAAAACATACATCGGTTAGGCTTAATAGAATAAAGATATTGGGTCTTAATAGTTAAATGGGCTGTAATATTGGCCCAATGTAAAACATAAGAAGCACTGACGAGAAAGCTGGAGCCAAAGTCGTAACGGAGGAAGAAGAAGATCTGCTTCTGCAAAAAACCTTATCCTGCTATGGCTTCCACTTTCGTCTGCTCTCTACCAAATCCTTTCTTTGCTTTTCCGGTCAAAGCAACTACTCCTTCGACGGCTAACCATACGCTTCTCGGAAGTCGAAGAGGTTGTCTTAGAATCAAAGCGATTTCCACTAAATGGGAACCGACAAAGGTTGTTCCTCAGGCAGACAGAGTTCTTGTTCGTCTTGAAGATCTTCCTATTAAATCCTCAGGTGGAGTATTGTTGCCTAAAGCAGCTGTGAAGTTTGAGAGATACCTAACAGGAGAGATTATATCTGTTGGTTCTGAGGTTGGACAACAAGTTGGACCTGGAAAGAGGGTTTTGTTCTCTGATGTGAGCGCTTATGAGGTCGATTTGGGAACCGATGCTAGGCATTGCTTCTGTAAAGAGAGTGACTTGTTGGCCCTCGTTGAGTGAAGTCTTGTCCAAGAGGGAGAGATTTGAAGATTTTACAAGTTTTCTGTAATTTTCAGACAGCAATTGTTGTTTCTAGTTAATCCTTCAATTTAATATCAATTGAGATCACTTTCAGAGATAGTCATATTCAAAAAAAAAAACAAGTTTTCTC
CDS Sequence
- >AT2G44650.1
ATGGCTTCCACTTTCGTCTGCTCTCTACCAAATCCTTTCTTTGCTTTTCCGGTCAAAGCAACTACTCCTTCGACGGCTAACCATACGCTTCTCGGAAGTCGAAGAGGTTGTCTTAGAATCAAAGCGATTTCCACTAAATGGGAACCGACAAAGGTTGTTCCTCAGGCAGACAGAGTTCTTGTTCGTCTTGAAGATCTTCCTATTAAATCCTCAGGTGGAGTATTGTTGCCTAAAGCAGCTGTGAAGTTTGAGAGATACCTAACAGGAGAGATTATATCTGTTGGTTCTGAGGTTGGACAACAAGTTGGACCTGGAAAGAGGGTTTTGTTCTCTGATGTGAGCGCTTATGAGGTCGATTTGGGAACCGATGCTAGGCATTGCTTCTGTAAAGAGAGTGACTTGTTGGCCCTCGTTGAGTGA
Protein Sequence
- >AT2G44650.1
MASTFVCSLPNPFFAFPVKATTPSTANHTLLGSRRGCLRIKAISTKWEPTKVVPQADRVLVRLEDLPIKSSGGVLLPKAAVKFERYLTGEIISVGSEVGQQVGPGKRVLFSDVSAYEVDLGTDARHCFCKESDLLALVE