Information report for AT2G44060
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Rapid identification of Arabidopsis insertion mutants by non-radioactive detection of T-DNA tagged genes. DOI: 10.1046/j.1365-313x.2002.01416.x ; PMID: 12383089
- Isolation and characterization of flower-specific transcripts in Acacia mangium. DOI: 10.1093/treephys/25.2.167 ; PMID: 15574398
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- LEA (late embryogenesis abundant) proteins and their encoding genes in Arabidopsis thaliana. DOI: 10.1186/1471-2164-9-118 ; PMID: 18318901
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying and up-regulation. DOI: 10.1093/jxb/ert227 ; PMID: 24064926
- Functional characterization of selected LEA proteins from Arabidopsis thaliana in yeast and in vitro. DOI: 10.1007/s00425-014-2089-z ; PMID: 24841476
- The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress. DOI: 10.1105/tpc.114.127316 ; PMID: 25005920
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: O80576
- EMBL: AC004005, BT024723, CP002685
- AlphaFoldDB: O80576
- EnsemblPlants: AT2G44060.1, AT2G44060.2
- Gramene: AT2G44060.1, AT2G44060.2
- KEGG: ath:AT2G44060
- Orthologous matrix: TLPLEKC
- ExpressionAtlas: AT2G44060
- InterPro: IPR004864, IPR013990, IPR045043
- PANTHER: PTHR31459, PTHR31459:SF2
- SUPFAM: SSF117070
- Gene3D: 2.60.40.1820
- OrthoDB: O80576
- SWISS-MODEL: O80576
Homologs
- Oryza sativa OsLEA5
- Setaria italica Seita.2G175200, Seita.2G175200.1.p
- Setaria viridis Sevir.2G181400.1.p, SEVIR_2G181400v2, Sevir.2G181400.2.p, Sevir.2G181400.3.p
Sequences
cDNA Sequence
- >AT2G44060.1
TTACGCGTCACATTGATAATAGTTAATATAAAGTTCAACGGATCAACCAATTCCACAATCTATAATCATTTTGTGACTCTTGGAGCACTCTCTTCTCTTTGTCTCTGTGACTCACATTCATCCAATCCAGGAGGCATGTCGACATCTGAGGATAAACCGGAAATCATCAGTAGAGTAGTTCATCAGGAGGGTGACGTGGAAATCGTCGATAGAAGTCAGAAGGATAAGGACGAGGAAAAAGAAGAAGGGAAAGGTGGATTCCTCGATAAGGTGAAAGATTTCATTCATGACATTGGTGAGAAACTCGAGGGAACCATTGGCTTTGGGAAGCCAACTGCTGATGTCTCTGCGATTCATATCCCTAAGATCAATCTTGAGAGGGCAGATATTGTTGTGGATGTGCTTGTCAAGAACCCGAATCCAGTTCCTATCCCTCTCATCGATGTCAACTACCTGGTCGAGAGCGATGGGAGGAAACTGGTTTCTGGTTTGATCCCGGATGCTGGAACACTCAAGGCTCATGGAGAAGAAACTGTGAAGATACCATTGACGTTGATCTATGATGACATCAAGAGCACTTACAACGATATCAACCCCGGGATGATCATACCTTACAGAATCAAGGTTGATCTGATTGTGGATGTGCCAGTATTGGGAAGACTGACATTGCCGCTGGAGAAATGTGGAGAGATCCCAATTCCAAAGAAACCTGATGTTGATATCGAGAAGATTAAGTTCCAGAAGTTCTCTTTGGAGGAAACCGTGGCGATTCTCCATGTGAGGCTTCAGAACATGAATGATTTCGACTTGGGGCTCAATGACTTGGACTGTGAAGTTTGGCTGTGTGATGTAAGCATTGGGAAAGCAGAGATCGCGGACTCGATCAAGCTTGACAAAAACGGAAGCGGATTGATTAATGTGCCGATGACATTCCGACCAAAGGACTTTGGTTCTGCGCTTTGGGATATGATTCGTGGTAAAGGAACAGGGTACACAATCAAAGGTAATATTGATGTTGATACACCATTTGGAGCTATGAAGCTTCCTATTATCAAGGAAGGTGGAGAGACCCGTCTGAAGAAGGAAGATGATGATGACGACGATGAGGAATAAGGAAACAAAGTGCTGCAGAGACAGAATGGTCATAGTTACTAAATCTCCGATCTTGAAATGTCTATTTAAAATTAAAAAAAAAGAAAGACTTGTTTTGTGTGCTTTTTGATAACTGATGGATCAGACTTTTGAATAGAGCCGTCTTTTTATTGGACTTCTTATATCATTGTGGTCTCTCGTTAGCTTAGTTATGTTTTGTGTTTCACATTGGCGTTTATCAATTACATGAATGAACCTAAAACGCAGTTCACATCCTCAACGATCATGTGTTAATTCATATTTAGAAAATTTAATCTCAAGTGATT - >AT2G44060.2
TTACGCGTCACATTGATAATAGTTAATATAAAGTTCAACGGATCAACCAATTCCACAATCTATAATCATTTTGTGACTCTTGGAGCACTCTCTTCTCTTTGTCTCTGTGACTCACATTCATCCAATCCAGGAGGCATGTCGACATCTGAGGATAAACCGGAAATCATCAGTAGAGTAGTTCATCAGGAGGGTGACGTGGAAATCGTCGATAGAAGTCAGAAGGATAAGGACGAGGAAAAAGAAGAAGGGAAAGGTGGATTCCTCGATAAGGTGAAAGATTTCATTCATGACATTGGTGAGAAACTCGAGGGAACCATTGGCTTTGGGAAGCCAACTGCTGATGTCTCTGCGATTCATATCCCTAAGATCAATCTTGAGAGGGCAGATATTGTTGTGGATGTGCTTGTCAAGAACCCGAATCCAGTTCCTATCCCTCTCATCGATGTCAACTACCTGGTCGAGAGCGATGGGAGGAAACTGGTTTCTGGTTTGATCCCGGATGCTGGAACACTCAAGGCTCATGGAGAAGAAACTGTGAAGATACCATTGACGTTGATCTATGATGACATCAAGAGCACTTACAACGATATCAACCCCGGGATGATCATACCTTACAGAATCAAGGTTGATCTGATTGTGGATGTGCCAGTATTGGGAAGACTGACATTGCCGCTGGAGAAATGTGGAGAGATCCCAATTCCAAAGAAACCTGATGTTGATATCGAGAAGATTAAGTTCCAGAAGTTCTCTTTGGAGGAAACCGTGGCGATTCTCCATGTGAGGCTTCAGAACATGAATGATTTCGACTTGGGGCTCAATGACTTGGACTGTGAAGTTTGGCTGTGTGATGTAAGCATTGGGAAAGCAGAGATCGCGGACTCGATCAAGCTTGACAAAAACGGAAGCGGATTGATTAATGTGCCGATGACATTCCGACCAAAGGACTTTGGTTCTGCGCTTTGGGATATGATTCGTGGTAAAGGAACAGGGTACACAATCAAAGGTAATATTGATGTTGATACACCATTTGGAGCTATGAAGCTTCCTATTATCAAGGAAGGTGGAGAGACCCGTCTGAAGAAGGAAGATGATGATGACGACGATGAGGAATAAGGAAACAAAGTGCTGCAGAGACAGAATGGTCATAGTTACTAAATCTCCGATCTTGAAATGTCTATTTAAAATTAAAAAAAAAGAAAGACTTGTTTTGTGTGCTTTTTGATAACTGATGGATCAGACTTTTGAATAGAGCCGTCTTTTTATTGGACTTCTTATATCATTGTGGTCTCTCGTTAGCTTAGTTATGTTTTGTGTTTCACATTGGCGTTTATCAATTACATGAATGAACCTAAAACGCAGTTCACATCCTCAACGATCATGTGTTAATTCATATTTAGAAAATTTAATCTCAAGTGATT
CDS Sequence
- >AT2G44060.1
ATGTCGACATCTGAGGATAAACCGGAAATCATCAGTAGAGTAGTTCATCAGGAGGGTGACGTGGAAATCGTCGATAGAAGTCAGAAGGATAAGGACGAGGAAAAAGAAGAAGGGAAAGGTGGATTCCTCGATAAGGTGAAAGATTTCATTCATGACATTGGTGAGAAACTCGAGGGAACCATTGGCTTTGGGAAGCCAACTGCTGATGTCTCTGCGATTCATATCCCTAAGATCAATCTTGAGAGGGCAGATATTGTTGTGGATGTGCTTGTCAAGAACCCGAATCCAGTTCCTATCCCTCTCATCGATGTCAACTACCTGGTCGAGAGCGATGGGAGGAAACTGGTTTCTGGTTTGATCCCGGATGCTGGAACACTCAAGGCTCATGGAGAAGAAACTGTGAAGATACCATTGACGTTGATCTATGATGACATCAAGAGCACTTACAACGATATCAACCCCGGGATGATCATACCTTACAGAATCAAGGTTGATCTGATTGTGGATGTGCCAGTATTGGGAAGACTGACATTGCCGCTGGAGAAATGTGGAGAGATCCCAATTCCAAAGAAACCTGATGTTGATATCGAGAAGATTAAGTTCCAGAAGTTCTCTTTGGAGGAAACCGTGGCGATTCTCCATGTGAGGCTTCAGAACATGAATGATTTCGACTTGGGGCTCAATGACTTGGACTGTGAAGTTTGGCTGTGTGATGTAAGCATTGGGAAAGCAGAGATCGCGGACTCGATCAAGCTTGACAAAAACGGAAGCGGATTGATTAATGTGCCGATGACATTCCGACCAAAGGACTTTGGTTCTGCGCTTTGGGATATGATTCGTGGTAAAGGAACAGGGTACACAATCAAAGGTAATATTGATGTTGATACACCATTTGGAGCTATGAAGCTTCCTATTATCAAGGAAGGTGGAGAGACCCGTCTGAAGAAGGAAGATGATGATGACGACGATGAGGAATAA - >AT2G44060.2
ATGTCGACATCTGAGGATAAACCGGAAATCATCAGTAGAGTAGTTCATCAGGAGGGTGACGTGGAAATCGTCGATAGAAGTCAGAAGGATAAGGACGAGGAAAAAGAAGAAGGGAAAGGTGGATTCCTCGATAAGGTGAAAGATTTCATTCATGACATTGGTGAGAAACTCGAGGGAACCATTGGCTTTGGGAAGCCAACTGCTGATGTCTCTGCGATTCATATCCCTAAGATCAATCTTGAGAGGGCAGATATTGTTGTGGATGTGCTTGTCAAGAACCCGAATCCAGTTCCTATCCCTCTCATCGATGTCAACTACCTGGTCGAGAGCGATGGGAGGAAACTGGTTTCTGGTTTGATCCCGGATGCTGGAACACTCAAGGCTCATGGAGAAGAAACTGTGAAGATACCATTGACGTTGATCTATGATGACATCAAGAGCACTTACAACGATATCAACCCCGGGATGATCATACCTTACAGAATCAAGGTTGATCTGATTGTGGATGTGCCAGTATTGGGAAGACTGACATTGCCGCTGGAGAAATGTGGAGAGATCCCAATTCCAAAGAAACCTGATGTTGATATCGAGAAGATTAAGTTCCAGAAGTTCTCTTTGGAGGAAACCGTGGCGATTCTCCATGTGAGGCTTCAGAACATGAATGATTTCGACTTGGGGCTCAATGACTTGGACTGTGAAGTTTGGCTGTGTGATGTAAGCATTGGGAAAGCAGAGATCGCGGACTCGATCAAGCTTGACAAAAACGGAAGCGGATTGATTAATGTGCCGATGACATTCCGACCAAAGGACTTTGGTTCTGCGCTTTGGGATATGATTCGTGGTAAAGGAACAGGGTACACAATCAAAGGTAATATTGATGTTGATACACCATTTGGAGCTATGAAGCTTCCTATTATCAAGGAAGGTGGAGAGACCCGTCTGAAGAAGGAAGATGATGATGACGACGATGAGGAATAA
Protein Sequence
- >AT2G44060.1
MSTSEDKPEIISRVVHQEGDVEIVDRSQKDKDEEKEEGKGGFLDKVKDFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVLVKNPNPVPIPLIDVNYLVESDGRKLVSGLIPDAGTLKAHGEETVKIPLTLIYDDIKSTYNDINPGMIIPYRIKVDLIVDVPVLGRLTLPLEKCGEIPIPKKPDVDIEKIKFQKFSLEETVAILHVRLQNMNDFDLGLNDLDCEVWLCDVSIGKAEIADSIKLDKNGSGLINVPMTFRPKDFGSALWDMIRGKGTGYTIKGNIDVDTPFGAMKLPIIKEGGETRLKKEDDDDDDEE - >AT2G44060.2
MSTSEDKPEIISRVVHQEGDVEIVDRSQKDKDEEKEEGKGGFLDKVKDFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVLVKNPNPVPIPLIDVNYLVESDGRKLVSGLIPDAGTLKAHGEETVKIPLTLIYDDIKSTYNDINPGMIIPYRIKVDLIVDVPVLGRLTLPLEKCGEIPIPKKPDVDIEKIKFQKFSLEETVAILHVRLQNMNDFDLGLNDLDCEVWLCDVSIGKAEIADSIKLDKNGSGLINVPMTFRPKDFGSALWDMIRGKGTGYTIKGNIDVDTPFGAMKLPIIKEGGETRLKKEDDDDDDEE