Information report for AT2G44050
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Plant riboflavin biosynthesis. Cloning, chloroplast localization, expression, purification, and partial characterization of spinach lumazine synthase. DOI: 10.1074/jbc.274.31.22114 ; PMID: 10419541
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- COS1: an Arabidopsis coronatine insensitive1 suppressor essential for regulation of jasmonate-mediated plant defense and senescence. DOI: 10.1105/tpc.020370 ; PMID: 15075400
- Natural genetic variation in whole-genome expression in Arabidopsis thaliana: the impact of physiological QTL introgression. DOI: 10.1111/j.1365-294X.2006.02774.x ; PMID: 16626458
- MicroRNA-targeted and small interfering RNA-mediated mRNA degradation is regulated by argonaute, dicer, and RNA-dependent RNA polymerase in Arabidopsis. DOI: 10.1105/tpc.106.042127 ; PMID: 16798886
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Plant riboflavin biosynthesis. Cloning, chloroplast localization, expression, purification, and partial characterization of spinach lumazine synthase. DOI: 10.1074/jbc.274.31.22114 ; PMID: 10419541
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VP65
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VP65
- EnsemblPlants: AT2G44050.1
- Gramene: AT2G44050.1
- KEGG: ath:AT2G44050
- Orthologous matrix: CQGVTQG
- ExpressionAtlas: AT2G44050
- InterPro: IPR002180, IPR017420, IPR034964
- PANTHER: PTHR21058, PTHR21058:SF0
- SUPFAM: SSF52121
- Gene3D: 3.40.50.960
- OrthoDB: A0A178VP65
- SWISS-MODEL: A0A178VP65
- Conserved Domain Database: cd09209
Homologs
- Oryza sativa OsLS
Sequences
cDNA Sequence
- >AT2G44050.1
CTTGAACCGATTTGATAAGCTAATGGACCTCACAGTCTCACTCTTAACCTGAAGAACGAAGAACCGTCTCTAAAACTCCGACGAACGAAAAATGAAGTCATTAGCTTCGCCGCCGTGTCTCCGCCTGATACCGACGGCACACCGTCAGCTCAATTCGCGTCAATCTTCCTCCGCCTGTTATATACACGGTGGCTCTTCTGTGAACAAATCCAATAATCTCTCATTCTCCTCATCCACATCCGGATTTGCGTCACCACTAGCTGTAGAGAAGGAATTACGCTCTTCATTCGTACAGACGGCTGCTGTTCGCCATGTTACGGGGTCTCTTATCAGAGGCGAAGGTCTTAGATTCGCCATCGTGGTAGCTCGTTTCAATGAGGTTGTGACTAAGTTGCTTTTGGAAGGAGCGATTGAGACTTTCAAGAAGTATTCAGTCAGAGAAGAAGACATTGAAGTTATTTGGGTTCCTGGCAGCTTTGAAATTGGTGTTGTTGCACAAAATCTTGGGAAATCGGGAAAATTTCATGCTGTTTTATGTATCGGCGCTGTGATAAGAGGAGATACCACACATTATGATGCTGTTGCCAACTCTGCTGCGTCTGGAGTACTTTCTGCTAGCATAAATTCAGGCGTTCCATGCATATTTGGTGTACTGACTTGCGAGGACATGGATCAGGCTCTGAATCGATCTGGTGGCAAAGCCGGCAATAAGGGAGCTGAAACTGCTTTGACGGCGCTCGAAATGGCGTCGTTGTTTGAGCACCACCTGAAATAGCTCGGCTCGTTCGATGGATGAACATGATCACGTATGAGAACCTCTTGATGTTGTCCCATTTGGTTACAATCCAGTCTCTGAAATTGTTTGTACCTCAAAGATTGTCAAAATGTTTTACCCTTGGTTACAAAATCATTTAAACGCTTTTGTAAGCTTCTGGCCTTGTTTTTTTTTTTTGAATCGTATGATAATAATAATTCCTCCGAATTTTGGGGGTCTTTCTGTACTAATCAAAAATGTGATCTTCTTTGTTGTAATATCTTGAAATTGAGGTGTCGAAATGGATGTCAATTTTAAAAGCCAATAAGGATCTTAC
CDS Sequence
- >AT2G44050.1
ATGAAGTCATTAGCTTCGCCGCCGTGTCTCCGCCTGATACCGACGGCACACCGTCAGCTCAATTCGCGTCAATCTTCCTCCGCCTGTTATATACACGGTGGCTCTTCTGTGAACAAATCCAATAATCTCTCATTCTCCTCATCCACATCCGGATTTGCGTCACCACTAGCTGTAGAGAAGGAATTACGCTCTTCATTCGTACAGACGGCTGCTGTTCGCCATGTTACGGGGTCTCTTATCAGAGGCGAAGGTCTTAGATTCGCCATCGTGGTAGCTCGTTTCAATGAGGTTGTGACTAAGTTGCTTTTGGAAGGAGCGATTGAGACTTTCAAGAAGTATTCAGTCAGAGAAGAAGACATTGAAGTTATTTGGGTTCCTGGCAGCTTTGAAATTGGTGTTGTTGCACAAAATCTTGGGAAATCGGGAAAATTTCATGCTGTTTTATGTATCGGCGCTGTGATAAGAGGAGATACCACACATTATGATGCTGTTGCCAACTCTGCTGCGTCTGGAGTACTTTCTGCTAGCATAAATTCAGGCGTTCCATGCATATTTGGTGTACTGACTTGCGAGGACATGGATCAGGCTCTGAATCGATCTGGTGGCAAAGCCGGCAATAAGGGAGCTGAAACTGCTTTGACGGCGCTCGAAATGGCGTCGTTGTTTGAGCACCACCTGAAATAG
Protein Sequence
- >AT2G44050.1
MKSLASPPCLRLIPTAHRQLNSRQSSSACYIHGGSSVNKSNNLSFSSSTSGFASPLAVEKELRSSFVQTAAVRHVTGSLIRGEGLRFAIVVARFNEVVTKLLLEGAIETFKKYSVREEDIEVIWVPGSFEIGVVAQNLGKSGKFHAVLCIGAVIRGDTTHYDAVANSAASGVLSASINSGVPCIFGVLTCEDMDQALNRSGGKAGNKGAETALTALEMASLFEHHLK