Gene Details:
- Gene ID: AT2G43980
- Gene Symbol: AtITPK4, ITPK4
- Gene Name: inositol 1,3,4-trisphosphate 5/6-kinase 4, inositol 1,3,4-trisphosphate 5/6-kinase 4
- Description: inositol 1,3,4-trisphosphate 5/6-kinase 4;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Arabidopsis thaliana inositol 1,3,4-trisphosphate 5/6-kinase 4 (AtITPK4) is an outlier to a family of ATP-grasp fold proteins from Arabidopsis. DOI: 10.1016/j.febslet.2007.07.046 ; PMID: 17698066
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Identification of genes necessary for wild-type levels of seed phytic acid in Arabidopsis thaliana using a reverse genetics approach. DOI: 10.1007/s00438-011-0631-2 ; PMID: 21698461
- Natural Genetic Variation of Seed Micronutrients of Arabidopsis thaliana Grown in Zinc-Deficient and Zinc-Amended Soil. DOI: 10.3389/fpls.2016.01070 ; PMID: 27507976
- Arabidopsis inositol phosphate kinases IPK1 and ITPK1 constitute a metabolic pathway in maintaining phosphate homeostasis. DOI: 10.1111/tpj.13974 ; PMID: 29779236
- Inositol polyphosphates-regulated polyubiquitination of PHR1 by NLA E3 ligase during phosphate starvation response in Arabidopsis. DOI: 10.1111/nph.18621 ; PMID: 36377104
- Diversification in the inositol tris/tetrakisphosphate kinase (ITPK) family: crystal structure and enzymology of the outlier AtITPK4. DOI: 10.1042/BCJ20220579 ; PMID: 36896917
Sequences:
cDNA Sequence
- >AT2G43980.1
ATTTATTCTTTTGTTCCTCAGCTGAGAGAGAAGAAGAACGATGAAAGGGGTTCTACTTGACGAATCTGTACTGTTTAGTCCTGAGAGTGAAGATTCTTCGCCAAGTCTGCGAGAATCAGTCCCGTCGCTTCTCAGGCTGCTTCGTTATTCCATGATCCGAACGGGGATTTCATATGGACTTGATCTTCCGGAAAACAAGGTGGATCTACTGAGGAAAACGGCAGCAGAATACTCGATCAATTGCTTGCCTTTAGAGACGTCTCTTACGAGTGTTACCTTTGGTGATACTCTCAAAGCATGGTATAGTGACGGTAGTATTCTGTATGTTGCTTCAAGCAGAAAGGAAGAGATACTGCGTGAACTTAGTCCCAGTCAGCTAGTTGTTTTACTCGATGTTGAAGGCGATTCACTTGAGGATCCTAACATAATTCATATCCATAGTCTTGAGGAGCTGCCAATGACTATTTGCTGCATAAACAAAAAGGCAATGGGTGATGGTGCTGCAATAGTTGCTTACATCATGAAGCCATCTCGGGTAGAGGACTTTGCCAAGAGGGGTGCTTTACCCATGTATCCTACTTCATGTGGGTTGATATTTCTGCCCCTCATGTTTGAGTTCCCTCTTGCATCTCAACTCAAACACGCTGATATCATTTTCCACAAAGCAACTGATGAAATCTTGTCCATTGAACTGAACTGCTCCGACTCAAAATCATCTGTTGCAGTTACATTCTCTACCGGCATGGAGAAACTGAAAAAGTATATGGAAGATCAAAATGCTTGTGCCATAGTCGACCCTATTCGAAATATATATCCAGTCGTAGACCGACTCAAGATGCAACATATTCTTCTTGGATTAGAGGGCCTTGGTGCAGCAGGACGAAAGATAAGAGGTGCCTGCTTTCTCAAGATTGACAGCTATGATGAACCAGATCTGGCTCAGAACTTGTCAAGAGCTGGACTCTCTCTTCCATGTATTGTGAAACCACAGGTTGCCTGTGGTGTTGCTGATGCTCACAGCATGGCCATTGTCTTCCGAGTCGAGGATTTTAAGAATCTGAACACTCCTGTTCCTGCCATTATCCAAGAGTATGTGGACCATTCATCTAGGATTTTTAAGTTTTACGTCTTGGGGGAAACGATCTTTCACGCGGTCAAGAAATCGATCCCTAGTTCTTCTAGTCTGAGGAAATCAGCGGAGGAAAATGGTCTCAAACCAATTCTCTTTGACAGCTTAAAATCGTTACCTGTTGATTCCGCAAACCAGAACCCGGTAAGCGAGATTGATCTAGAGCTAGTTACAGAAGCAGCTACCTGGCTAAGAAAGAAGCTTGATCTCACAATCTTCGGCTTTGACGTAGTTATTCAAGAAGGAACAGGAGATCACGTGATAGTAGACTTGAACTACTTACCATCCTTTAAAGAAGTTCCGGATAACATCGCAGTTCCTGCATTCTGGGAAGCCATCAGAAACAGATTCGACCAACATGTCCAAGAGAAGCATTGAATCCAACATTGTGGGAAGCGAAACTCTTCTGTCTGTTTATTTTAGGAATGACCTGAAGCTGCTTTATGCTTCATACTCTGAGACTAATAATAATTGAGAAACATCTTTTATGGAATTTTGTAATTTTAAGACCAAACAAGTGAAGTTTTTTTTCTTTTGTCGATAAGAACAAAAGTCACATTCT
CDS Sequence
- >AT2G43980.1
ATGAAAGGGGTTCTACTTGACGAATCTGTACTGTTTAGTCCTGAGAGTGAAGATTCTTCGCCAAGTCTGCGAGAATCAGTCCCGTCGCTTCTCAGGCTGCTTCGTTATTCCATGATCCGAACGGGGATTTCATATGGACTTGATCTTCCGGAAAACAAGGTGGATCTACTGAGGAAAACGGCAGCAGAATACTCGATCAATTGCTTGCCTTTAGAGACGTCTCTTACGAGTGTTACCTTTGGTGATACTCTCAAAGCATGGTATAGTGACGGTAGTATTCTGTATGTTGCTTCAAGCAGAAAGGAAGAGATACTGCGTGAACTTAGTCCCAGTCAGCTAGTTGTTTTACTCGATGTTGAAGGCGATTCACTTGAGGATCCTAACATAATTCATATCCATAGTCTTGAGGAGCTGCCAATGACTATTTGCTGCATAAACAAAAAGGCAATGGGTGATGGTGCTGCAATAGTTGCTTACATCATGAAGCCATCTCGGGTAGAGGACTTTGCCAAGAGGGGTGCTTTACCCATGTATCCTACTTCATGTGGGTTGATATTTCTGCCCCTCATGTTTGAGTTCCCTCTTGCATCTCAACTCAAACACGCTGATATCATTTTCCACAAAGCAACTGATGAAATCTTGTCCATTGAACTGAACTGCTCCGACTCAAAATCATCTGTTGCAGTTACATTCTCTACCGGCATGGAGAAACTGAAAAAGTATATGGAAGATCAAAATGCTTGTGCCATAGTCGACCCTATTCGAAATATATATCCAGTCGTAGACCGACTCAAGATGCAACATATTCTTCTTGGATTAGAGGGCCTTGGTGCAGCAGGACGAAAGATAAGAGGTGCCTGCTTTCTCAAGATTGACAGCTATGATGAACCAGATCTGGCTCAGAACTTGTCAAGAGCTGGACTCTCTCTTCCATGTATTGTGAAACCACAGGTTGCCTGTGGTGTTGCTGATGCTCACAGCATGGCCATTGTCTTCCGAGTCGAGGATTTTAAGAATCTGAACACTCCTGTTCCTGCCATTATCCAAGAGTATGTGGACCATTCATCTAGGATTTTTAAGTTTTACGTCTTGGGGGAAACGATCTTTCACGCGGTCAAGAAATCGATCCCTAGTTCTTCTAGTCTGAGGAAATCAGCGGAGGAAAATGGTCTCAAACCAATTCTCTTTGACAGCTTAAAATCGTTACCTGTTGATTCCGCAAACCAGAACCCGGTAAGCGAGATTGATCTAGAGCTAGTTACAGAAGCAGCTACCTGGCTAAGAAAGAAGCTTGATCTCACAATCTTCGGCTTTGACGTAGTTATTCAAGAAGGAACAGGAGATCACGTGATAGTAGACTTGAACTACTTACCATCCTTTAAAGAAGTTCCGGATAACATCGCAGTTCCTGCATTCTGGGAAGCCATCAGAAACAGATTCGACCAACATGTCCAAGAGAAGCATTGA
Protein Sequence
- >AT2G43980.1
MKGVLLDESVLFSPESEDSSPSLRESVPSLLRLLRYSMIRTGISYGLDLPENKVDLLRKTAAEYSINCLPLETSLTSVTFGDTLKAWYSDGSILYVASSRKEEILRELSPSQLVVLLDVEGDSLEDPNIIHIHSLEELPMTICCINKKAMGDGAAIVAYIMKPSRVEDFAKRGALPMYPTSCGLIFLPLMFEFPLASQLKHADIIFHKATDEILSIELNCSDSKSSVAVTFSTGMEKLKKYMEDQNACAIVDPIRNIYPVVDRLKMQHILLGLEGLGAAGRKIRGACFLKIDSYDEPDLAQNLSRAGLSLPCIVKPQVACGVADAHSMAIVFRVEDFKNLNTPVPAIIQEYVDHSSRIFKFYVLGETIFHAVKKSIPSSSSLRKSAEENGLKPILFDSLKSLPVDSANQNPVSEIDLELVTEAATWLRKKLDLTIFGFDVVIQEGTGDHVIVDLNYLPSFKEVPDNIAVPAFWEAIRNRFDQHVQEKH