Information report for AT2G43460
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0022625 — part of — cytosolic large ribosomal subunit
- GO:0022626 — located in — cytosolic ribosome
- GO:0005829 — located in — cytosol
- GO:0022618 — involved in — protein-RNA complex assembly
- GO:0022625 — located in — cytosolic large ribosomal subunit
- GO:0005737 — located in — cytoplasm
- GO:0003735 — enables — structural constituent of ribosome
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- A library of Arabidopsis 35S-cDNA lines for identifying novel mutants. DOI: 10.1023/a:1011699722052 ; PMID: 11575724
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Patterns of gene duplication in the plant SKP1 gene family in angiosperms: evidence for multiple mechanisms of rapid gene birth. DOI: 10.1111/j.1365-313X.2007.03097.x ; PMID: 17470057
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Gene Resources
- UniProt: A0A178VC46
- EMBL: CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VC46
- EnsemblPlants: AT2G43460.1, AT3G59540.1
- Gramene: AT2G43460.1, AT3G59540.1
- KEGG: ath:AT2G43460, ath:AT3G59540
- Orthologous matrix: MPKQIHD
- ExpressionAtlas: AT2G43460
- InterPro: IPR002675, IPR038464
- PANTHER: PTHR10965, PTHR10965:SF0
- Gene3D: 3.30.720.90
- OrthoDB: A0A178VC46
- SWISS-MODEL: A0A178VC46
Sequences
cDNA Sequence
- >AT2G43460.1
AGGGCTTCTTGATACAAAGTTTTTAAGAGATCTCTTTATATCCTCGCGACGGCGAATTCGCTCGACTCTCTCTGTGGACGGCGGCTAGTTTCAACCAACAGATTCGAGAATGCCTAAGCAAATCCACGAGATCAAGGACTTCCTTCTGACAGCTAGAAGGAAAGATGCACGATCTGTGAAGATCAAGAGAAGCAAGGATATTGTCAAGTTTAAGGTCAGATGCTCGAGGTACCTCTACACGCTCTGCGTCTTTGACCAAGAGAAAGCCGACAAGCTTAAGCAGTCTCTTCCTCCAGGTTTGAGTGTACAAGACCTTTGAAGATGAAGCAAAGTTCTTCTGCAGATTGGAGTTCCTTTGGTGACGAATCCTTTGCATCATTTTATAATTTCCTTAGGAGAGTTTATTTTGTGTCGTTAAATTTATGTTGAGACTTTTCGAGTTTGAGTGTGTTTTGGATTTAATTCAGTTTGAAAAACCAAATACGTTCTCAACTCTGGATTCAATTTGGATTTTTATTTTCAGACTTGAGAGTTGGTACCTTCTCCATCATTTATAATAACAATCACATTCATTAAATGAATCATAACCAAATTACTCCTTGATCTTAGCACTAACTACGATTTTAGGTTATATACTTT
CDS Sequence
- >AT2G43460.1
ATGCCTAAGCAAATCCACGAGATCAAGGACTTCCTTCTGACAGCTAGAAGGAAAGATGCACGATCTGTGAAGATCAAGAGAAGCAAGGATATTGTCAAGTTTAAGGTCAGATGCTCGAGGTACCTCTACACGCTCTGCGTCTTTGACCAAGAGAAAGCCGACAAGCTTAAGCAGTCTCTTCCTCCAGGTTTGAGTGTACAAGACCTTTGA
Protein Sequence
- >AT2G43460.1
MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLPPGLSVQDL